RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 TSHBP01222 138 aa7□□□□□ -1.29
HLA-DOA-201ENST00000229829 LINC00315P59091 139 aa7□□□□□ -1.29
HLA-DOA-201ENST00000229829 SLC25A29Q8N8R3 303 aa7□□□□□ -1.29
HLA-DOA-201ENST00000229829 M0R2P5 195 aa7□□□□□ -1.29
HLA-DOA-201ENST00000229829 NDUFA7O95182 113 aa7□□□□□ -1.29
HLA-DOA-201ENST00000229829 ZNF625Q96I27 306 aaPredicted RBP7□□□□□ -1.29
HLA-DOA-201ENST00000229829 LINC01587Q99440 93 aa7□□□□□ -1.29
HLA-DOA-201ENST00000229829 WNK1Q9H4A3 2382 aa6.99□□□□□ -1.29
HLA-DOA-201ENST00000229829 MXRA5Q9NR99 2828 aa6.99□□□□□ -1.29
HLA-DOA-201ENST00000229829 POLQO75417 2590 aa6.99□□□□□ -1.29
HLA-DOA-201ENST00000229829 USP9XQ93008 2570 aaPredicted RBP6.99□□□□□ -1.29
HLA-DOA-201ENST00000229829 J3KT08 172 aa6.99□□□□□ -1.29
HLA-DOA-201ENST00000229829 OR13C6PQ8NH95 151 aa6.99□□□□□ -1.29
HLA-DOA-201ENST00000229829 KIF25-AS1Q9Y6Z4 181 aa6.99□□□□□ -1.29
HLA-DOA-201ENST00000229829 IGKV3-20P01619 116 aa6.99□□□□□ -1.29
HLA-DOA-201ENST00000229829 IGHG2P01859 326 aa6.99□□□□□ -1.29
HLA-DOA-201ENST00000229829 HTN1P15515 57 aa6.99□□□□□ -1.29
HLA-DOA-201ENST00000229829 NRGNQ92686 78 aa6.99□□□□□ -1.29
HLA-DOA-201ENST00000229829 DNAJC30Q96LL9 226 aa6.98□□□□□ -1.29
HLA-DOA-201ENST00000229829 PKD1L2Q7Z442 2459 aa6.98□□□□□ -1.29
HLA-DOA-201ENST00000229829 A0A0J9YXV3 536 aa6.98□□□□□ -1.29
HLA-DOA-201ENST00000229829 COX6B1P14854 86 aa6.98□□□□□ -1.29
HLA-DOA-201ENST00000229829 C10orf99Q6UWK7 81 aa6.98□□□□□ -1.29
HLA-DOA-201ENST00000229829 GNLYP22749 145 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 SUMO4Q6EEV6 95 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 HRCT1Q6UXD1 115 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 APRG1Q8IVJ8 170 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 ZNRF2Q8NHG8 242 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 IGLV4-69A0A075B6H9 119 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 TRAV12-2A0A075B6T6 113 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 A8MZ25 164 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 F8WDY8 70 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 H7C423 109 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 SBSPONQ8IVN8 264 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 DSCR8Q96T75 97 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 MDFICQ9P1T7 246 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 ICOSQ9Y6W8 199 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 AVPP01185 164 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 Q6Q795 121 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 USMG5Q96IX5 58 aa6.97□□□□□ -1.29
HLA-DOA-201ENST00000229829 A6NDX4 124 aa6.96□□□□□ -1.29
HLA-DOA-201ENST00000229829 LINC01619G3V211 115 aa6.96□□□□□ -1.29
HLA-DOA-201ENST00000229829 RHOHQ15669 191 aa6.96□□□□□ -1.29
HLA-DOA-201ENST00000229829 PAPPA-AS1Q5QFB9 102 aa6.96□□□□□ -1.29
HLA-DOA-201ENST00000229829 C3orf22Q8N5N4 141 aa6.96□□□□□ -1.29
HLA-DOA-201ENST00000229829 TMEM263Q8WUH6 116 aaKnown RBP6.96□□□□□ -1.29
HLA-DOA-201ENST00000229829 DAZ1Q9NQZ3 744 aaKnown RBP6.96□□□□□ -1.29
HLA-DOA-201ENST00000229829 IGIPA6NJ69 53 aa6.96□□□□□ -1.3
HLA-DOA-201ENST00000229829 KLLNB2CW77 178 aa6.96□□□□□ -1.3
HLA-DOA-201ENST00000229829 POLR2KP53803 58 aaKnown RBP6.96□□□□□ -1.3
HLA-DOA-201ENST00000229829 IGHV4-30-2A0A087WSY4 118 aa6.96□□□□□ -1.3
HLA-DOA-201ENST00000229829 IGKV3D-7A0A0C4DH55 119 aa6.96□□□□□ -1.3
HLA-DOA-201ENST00000229829 SDHAF1A6NFY7 115 aa6.96□□□□□ -1.3
HLA-DOA-201ENST00000229829 KIR2DL5BQ8NHK3 375 aa6.96□□□□□ -1.3
HLA-DOA-201ENST00000229829 DCANP1Q8TF63 244 aa6.96□□□□□ -1.3
HLA-DOA-201ENST00000229829 A0A1W2PRX2 142 aa6.95□□□□□ -1.3
HLA-DOA-201ENST00000229829 EIF4EBP3O60516 100 aaPredicted RBP6.95□□□□□ -1.3
HLA-DOA-201ENST00000229829 IGLV1-40P01703 118 aa6.95□□□□□ -1.3
HLA-DOA-201ENST00000229829 MED14OSP0DP75 135 aa6.95□□□□□ -1.3
HLA-DOA-201ENST00000229829 TIRAPP58753 221 aa6.95□□□□□ -1.3
HLA-DOA-201ENST00000229829 IGHV4OR15-8A0A075B7B6 117 aa6.95□□□□□ -1.3
HLA-DOA-201ENST00000229829 A0A087WW49 117 aa6.95□□□□□ -1.3
HLA-DOA-201ENST00000229829 NXPH4O95158 308 aa6.95□□□□□ -1.3
HLA-DOA-201ENST00000229829 POM121L12Q8N7R1 296 aa6.95□□□□□ -1.3
HLA-DOA-201ENST00000229829 IGHV3-73A0A0B4J1V6 119 aa6.94□□□□□ -1.3
HLA-DOA-201ENST00000229829 SONP18583 2426 aaKnown RBP6.94□□□□□ -1.3
HLA-DOA-201ENST00000229829 F5H768 121 aa6.94□□□□□ -1.3
HLA-DOA-201ENST00000229829 HOXD3P31249 432 aaPredicted RBP6.94□□□□□ -1.3
HLA-DOA-201ENST00000229829 C10orf105Q8TEF2 133 aa6.94□□□□□ -1.3
HLA-DOA-201ENST00000229829 ANK2Q01484 3957 aa6.94□□□□□ -1.3
HLA-DOA-201ENST00000229829 UQCRQO14949 82 aa6.93□□□□□ -1.3
HLA-DOA-201ENST00000229829 BBC3Q96PG8 261 aaPredicted RBP6.93□□□□□ -1.3
HLA-DOA-201ENST00000229829 TRACP01848 142 aa6.93□□□□□ -1.3
HLA-DOA-201ENST00000229829 SDIM1Q6ZPB5 146 aa6.93□□□□□ -1.3
HLA-DOA-201ENST00000229829 H3BUA1 57 aa6.93□□□□□ -1.3
HLA-DOA-201ENST00000229829 VCYO14598 125 aa6.93□□□□□ -1.3
HLA-DOA-201ENST00000229829 PPP1R17O96001 155 aa6.93□□□□□ -1.3
HLA-DOA-201ENST00000229829 CFHR3Q02985 330 aa6.93□□□□□ -1.3
HLA-DOA-201ENST00000229829 C4orf26Q17RF5 130 aa6.93□□□□□ -1.3
HLA-DOA-201ENST00000229829 CCL19Q99731 98 aa6.93□□□□□ -1.3
HLA-DOA-201ENST00000229829 TIMM21Q9BVV7 248 aa6.93□□□□□ -1.3
HLA-DOA-201ENST00000229829 SPANXA1Q9NS26 97 aa6.93□□□□□ -1.3
HLA-DOA-201ENST00000229829 IGSF10Q6WRI0 2623 aa6.93□□□□□ -1.3
HLA-DOA-201ENST00000229829 A0A1B0GX51 115 aa6.92□□□□□ -1.3
HLA-DOA-201ENST00000229829 DOPEY1Q5JWR5 2465 aa6.92□□□□□ -1.3
HLA-DOA-201ENST00000229829 FBN2P35556 2912 aa6.92□□□□□ -1.3
HLA-DOA-201ENST00000229829 A0A0J9YXY3 114 aa6.92□□□□□ -1.3
HLA-DOA-201ENST00000229829 I3L3M4 83 aa6.92□□□□□ -1.3
HLA-DOA-201ENST00000229829 SPINK13Q1W4C9 94 aa6.92□□□□□ -1.3
HLA-DOA-201ENST00000229829 NDUFA12Q9UI09 145 aa6.92□□□□□ -1.3
HLA-DOA-201ENST00000229829 MYO9AB2RTY4 2548 aa6.92□□□□□ -1.3
HLA-DOA-201ENST00000229829 IGHV3-16A0A0C4DH30 117 aa6.92□□□□□ -1.3
HLA-DOA-201ENST00000229829 P0DMU3 169 aa6.92□□□□□ -1.3
HLA-DOA-201ENST00000229829 FAM231AP0DMU4 169 aa6.92□□□□□ -1.3
HLA-DOA-201ENST00000229829 FAM231CP0DMU5 169 aa6.92□□□□□ -1.3
HLA-DOA-201ENST00000229829 CD28P10747 220 aa6.92□□□□□ -1.3
HLA-DOA-201ENST00000229829 HIST1H4AP62805 103 aaKnown RBP6.92□□□□□ -1.3
HLA-DOA-201ENST00000229829 ANKRD17O75179 2603 aaKnown RBP6.91□□□□□ -1.3
HLA-DOA-201ENST00000229829 IGHV4-59P01825 116 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms