RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 LGALS3P17931 250 aaKnown RBP5.98□□□□□ -1.45
VAMP3-201ENST00000054666 CRYBA4P53673 196 aa5.98□□□□□ -1.45
VAMP3-201ENST00000054666 SPANXA1Q9NS26 97 aa5.98□□□□□ -1.45
VAMP3-201ENST00000054666 HELZ2Q9BYK8 2649 aaKnown RBP5.98□□□□□ -1.45
VAMP3-201ENST00000054666 ADARB2-AS1A8MUL3 147 aa5.98□□□□□ -1.45
VAMP3-201ENST00000054666 K7EP13 123 aa5.98□□□□□ -1.45
VAMP3-201ENST00000054666 LY6G6DO95868 133 aa5.98□□□□□ -1.45
VAMP3-201ENST00000054666 FABP2P12104 132 aa5.98□□□□□ -1.45
VAMP3-201ENST00000054666 ZNRF2Q8NHG8 242 aa5.98□□□□□ -1.45
VAMP3-201ENST00000054666 C16orf74Q96GX8 76 aa5.98□□□□□ -1.45
VAMP3-201ENST00000054666 OPRPNQ99935 248 aaPredicted RBP5.98□□□□□ -1.45
VAMP3-201ENST00000054666 UNC79Q9P2D8 2635 aa5.98□□□□□ -1.45
VAMP3-201ENST00000054666 TRBV7-3A0A075B6L6 115 aa5.97□□□□□ -1.45
VAMP3-201ENST00000054666 A0A1W2PPM0 123 aa5.97□□□□□ -1.45
VAMP3-201ENST00000054666 RPL35AP18077 110 aaKnown RBP5.97□□□□□ -1.45
VAMP3-201ENST00000054666 Q6ZSN1 163 aa5.97□□□□□ -1.45
VAMP3-201ENST00000054666 NAA38Q9BRA0 125 aaKnown RBP5.97□□□□□ -1.45
VAMP3-201ENST00000054666 CUBNO60494 3623 aa5.97□□□□□ -1.45
VAMP3-201ENST00000054666 TRAV4A0A0B4J268 109 aa5.97□□□□□ -1.45
VAMP3-201ENST00000054666 K7EP34 96 aa5.97□□□□□ -1.45
VAMP3-201ENST00000054666 K7EQD1 137 aa5.97□□□□□ -1.45
VAMP3-201ENST00000054666 K7ERJ3 54 aa5.97□□□□□ -1.45
VAMP3-201ENST00000054666 SRSF9Q13242 221 aaKnown RBP eCLIP5.97□□□□□ -1.45
VAMP3-201ENST00000054666 SAMD5Q5TGI4 173 aa5.97□□□□□ -1.45
VAMP3-201ENST00000054666 PHLDA1Q8WV24 401 aaPredicted RBP5.97□□□□□ -1.45
VAMP3-201ENST00000054666 WFDC10AQ9H1F0 79 aa5.97□□□□□ -1.45
VAMP3-201ENST00000054666 IGHV3-38A0A0C4DH36 116 aa5.96□□□□□ -1.46
VAMP3-201ENST00000054666 TRBV10-1A0A0K0K1A3 114 aa5.96□□□□□ -1.46
VAMP3-201ENST00000054666 J3QQQ9 107 aa5.96□□□□□ -1.46
VAMP3-201ENST00000054666 RPL36AP83881 106 aaKnown RBP5.96□□□□□ -1.46
VAMP3-201ENST00000054666 RPL36ALQ969Q0 106 aaKnown RBP5.96□□□□□ -1.46
VAMP3-201ENST00000054666 SPCS1Q9Y6A9 102 aa5.96□□□□□ -1.46
VAMP3-201ENST00000054666 FASNP49327 2511 aaKnown RBP5.96□□□□□ -1.46
VAMP3-201ENST00000054666 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.95□□□□□ -1.46
VAMP3-201ENST00000054666 A0A0J9YXV3 536 aa5.95□□□□□ -1.46
VAMP3-201ENST00000054666 TMEM223A0PJW6 202 aa5.95□□□□□ -1.46
VAMP3-201ENST00000054666 IGKV2-29A2NJV5 120 aaPredicted RBP5.95□□□□□ -1.46
VAMP3-201ENST00000054666 LEPROTO15243 131 aa5.95□□□□□ -1.46
VAMP3-201ENST00000054666 ZNF22P17026 224 aaPredicted RBP5.95□□□□□ -1.46
VAMP3-201ENST00000054666 DAZ2Q13117 558 aaKnown RBP5.95□□□□□ -1.46
VAMP3-201ENST00000054666 RRN3P1Q2M238 152 aa5.95□□□□□ -1.46
VAMP3-201ENST00000054666 Q6ZTI0 123 aa5.95□□□□□ -1.46
VAMP3-201ENST00000054666 OR5A1Q8NGJ0 315 aa5.95□□□□□ -1.46
VAMP3-201ENST00000054666 PLEKHB2Q96CS7 222 aa5.95□□□□□ -1.46
VAMP3-201ENST00000054666 AMELXQ99217 191 aa5.95□□□□□ -1.46
VAMP3-201ENST00000054666 CHCHD7Q9BUK0 85 aa5.95□□□□□ -1.46
VAMP3-201ENST00000054666 NOP10Q9NPE3 64 aaKnown RBP5.95□□□□□ -1.46
VAMP3-201ENST00000054666 UBE2D4Q9Y2X8 147 aa5.95□□□□□ -1.46
VAMP3-201ENST00000054666 C12orf74Q32Q52 190 aa5.95□□□□□ -1.46
VAMP3-201ENST00000054666 ZNF479Q96JC4 524 aa5.95□□□□□ -1.46
VAMP3-201ENST00000054666 C19orf73Q9NVV2 129 aa5.95□□□□□ -1.46
VAMP3-201ENST00000054666 ITPR2Q14571 2701 aa5.94□□□□□ -1.46
VAMP3-201ENST00000054666 TRGV2A0A075B6R0 118 aa5.94□□□□□ -1.46
VAMP3-201ENST00000054666 TSPEAR-AS2P59090 65 aa5.94□□□□□ -1.46
VAMP3-201ENST00000054666 SMAGPQ0VAQ4 97 aa5.94□□□□□ -1.46
VAMP3-201ENST00000054666 DGAT2L7PQ6IED9 249 aa5.94□□□□□ -1.46
VAMP3-201ENST00000054666 Q9UF83 564 aa5.94□□□□□ -1.46
VAMP3-201ENST00000054666 A0A0J9YY99 117 aa5.94□□□□□ -1.46
VAMP3-201ENST00000054666 INAFM1C9JVW0 142 aa5.94□□□□□ -1.46
VAMP3-201ENST00000054666 CIDEAO60543 219 aa5.94□□□□□ -1.46
VAMP3-201ENST00000054666 GIG44P09565 113 aaPredicted RBP5.94□□□□□ -1.46
VAMP3-201ENST00000054666 MRPS36P82909 103 aaKnown RBP5.94□□□□□ -1.46
VAMP3-201ENST00000054666 CEMP1Q6PRD7 247 aaPredicted RBP5.94□□□□□ -1.46
VAMP3-201ENST00000054666 Q6ZUT4 128 aa5.94□□□□□ -1.46
VAMP3-201ENST00000054666 DAZ4Q86SG3 579 aaKnown RBP5.94□□□□□ -1.46
VAMP3-201ENST00000054666 LINC00482Q8N8I6 264 aa5.94□□□□□ -1.46
VAMP3-201ENST00000054666 TIMM21Q9BVV7 248 aa5.94□□□□□ -1.46
VAMP3-201ENST00000054666 DAZ3Q9NR90 486 aaKnown RBP5.94□□□□□ -1.46
VAMP3-201ENST00000054666 SPANXB1Q9NS25 103 aaPredicted RBP5.94□□□□□ -1.46
VAMP3-201ENST00000054666 SETD2Q9BYW2 2564 aaPredicted RBP5.94□□□□□ -1.46
VAMP3-201ENST00000054666 IGHV3-64A0A075B6Q5 118 aa5.93□□□□□ -1.46
VAMP3-201ENST00000054666 GAGE12BA1L429 117 aa5.93□□□□□ -1.46
VAMP3-201ENST00000054666 RNASE13Q5GAN3 156 aaKnown RBP5.93□□□□□ -1.46
VAMP3-201ENST00000054666 GEMIN7Q9H840 131 aaKnown RBP5.93□□□□□ -1.46
VAMP3-201ENST00000054666 TINCRA0A1B0GVN0 87 aa5.93□□□□□ -1.46
VAMP3-201ENST00000054666 A0A1B0GWB2 263 aa5.93□□□□□ -1.46
VAMP3-201ENST00000054666 GAGE7O76087 117 aa5.93□□□□□ -1.46
VAMP3-201ENST00000054666 GAGE12FP0CL80 117 aa5.93□□□□□ -1.46
VAMP3-201ENST00000054666 GAGE12GP0CL81 117 aa5.93□□□□□ -1.46
VAMP3-201ENST00000054666 GAGE12IP0CL82 117 aa5.93□□□□□ -1.46
VAMP3-201ENST00000054666 KRTAP10-3P60369 221 aa5.93□□□□□ -1.46
VAMP3-201ENST00000054666 IGLL5B9A064 214 aa5.92□□□□□ -1.46
VAMP3-201ENST00000054666 TMEM238C9JI98 176 aa5.92□□□□□ -1.46
VAMP3-201ENST00000054666 INSL3P51460 131 aa5.92□□□□□ -1.46
VAMP3-201ENST00000054666 SLC25A29Q8N8R3 303 aa5.92□□□□□ -1.46
VAMP3-201ENST00000054666 GAGE12JA6NER3 117 aa5.91□□□□□ -1.46
VAMP3-201ENST00000054666 UBE2D3P61077 147 aa5.91□□□□□ -1.46
VAMP3-201ENST00000054666 UBE2D2P62837 147 aa5.91□□□□□ -1.46
VAMP3-201ENST00000054666 GAGE4Q13068 117 aa5.91□□□□□ -1.46
VAMP3-201ENST00000054666 GAGE5Q13069 117 aa5.91□□□□□ -1.46
VAMP3-201ENST00000054666 GAGE13Q4V321 117 aa5.91□□□□□ -1.46
VAMP3-201ENST00000054666 C9orf66Q5T8R8 295 aa5.91□□□□□ -1.46
VAMP3-201ENST00000054666 CSNK1G2-AS1Q8NCQ2 148 aa5.91□□□□□ -1.46
VAMP3-201ENST00000054666 NF1P21359 2839 aa5.91□□□□□ -1.46
VAMP3-201ENST00000054666 TRGV4A0A0C4DH28 118 aa5.91□□□□□ -1.46
VAMP3-201ENST00000054666 IGHV1-58A0A0C4DH39 117 aa5.91□□□□□ -1.46
VAMP3-201ENST00000054666 PLAC8L1A1L4L8 177 aa5.91□□□□□ -1.46
VAMP3-201ENST00000054666 UBE2L6O14933 153 aa5.91□□□□□ -1.46
VAMP3-201ENST00000054666 IGHV3-30-3P0DP02 117 aa5.91□□□□□ -1.46
VAMP3-201ENST00000054666 FAM104AQ969W3 186 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms