RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 PDE6HQ13956 83 aa6.84□□□□□ -1.31
PHGDH-212ENST00000641247 LYRM7Q5U5X0 104 aa6.84□□□□□ -1.31
PHGDH-212ENST00000641247 FOXI2Q6ZQN5 318 aa6.84□□□□□ -1.31
PHGDH-212ENST00000641247 ATOH7Q8N100 152 aa6.84□□□□□ -1.31
PHGDH-212ENST00000641247 DAZAP1Q96EP5 407 aaKnown RBP6.84□□□□□ -1.31
PHGDH-212ENST00000641247 MRPL16Q9NX20 251 aaKnown RBP6.84□□□□□ -1.31
PHGDH-212ENST00000641247 MDFICQ9P1T7 246 aa6.84□□□□□ -1.31
PHGDH-212ENST00000641247 GGTLC3B5MD39 225 aa6.83□□□□□ -1.32
PHGDH-212ENST00000641247 TAL2Q16559 108 aa6.83□□□□□ -1.32
PHGDH-212ENST00000641247 KIAA1644Q3SXP7 199 aa6.83□□□□□ -1.32
PHGDH-212ENST00000641247 Q5VSD8 79 aa6.83□□□□□ -1.32
PHGDH-212ENST00000641247 Q6AWC8 147 aa6.83□□□□□ -1.32
PHGDH-212ENST00000641247 ZNRF2Q8NHG8 242 aa6.83□□□□□ -1.32
PHGDH-212ENST00000641247 C18orf15Q96N68 181 aa6.83□□□□□ -1.32
PHGDH-212ENST00000641247 SPANXDQ9BXN6 97 aa6.83□□□□□ -1.32
PHGDH-212ENST00000641247 OTORQ9NRC9 128 aa6.83□□□□□ -1.32
PHGDH-212ENST00000641247 HIGD1BQ9P298 99 aa6.83□□□□□ -1.32
PHGDH-212ENST00000641247 CYSLTR1Q9Y271 337 aa6.83□□□□□ -1.32
PHGDH-212ENST00000641247 NACAE9PAV3 2078 aa6.83□□□□□ -1.32
PHGDH-212ENST00000641247 VPS13BQ7Z7G8 4022 aa6.83□□□□□ -1.32
PHGDH-212ENST00000641247 A0A087X0K7 114 aa6.82□□□□□ -1.32
PHGDH-212ENST00000641247 F2Z2F3 143 aa6.82□□□□□ -1.32
PHGDH-212ENST00000641247 H3BTX0 84 aa6.82□□□□□ -1.32
PHGDH-212ENST00000641247 K7EQG2 157 aa6.82□□□□□ -1.32
PHGDH-212ENST00000641247 K7EQM0 130 aa6.82□□□□□ -1.32
PHGDH-212ENST00000641247 EMP1P54849 157 aa6.82□□□□□ -1.32
PHGDH-212ENST00000641247 RIGQ13278 110 aa6.82□□□□□ -1.32
PHGDH-212ENST00000641247 ATP6V0E2Q8NHE4 81 aa6.82□□□□□ -1.32
PHGDH-212ENST00000641247 GLMPQ8WWB7 406 aa6.82□□□□□ -1.32
PHGDH-212ENST00000641247 C17orf77Q96MU5 243 aa6.82□□□□□ -1.32
PHGDH-212ENST00000641247 Q9H3A6 140 aa6.82□□□□□ -1.32
PHGDH-212ENST00000641247 ZNF492Q9P255 531 aa6.82□□□□□ -1.32
PHGDH-212ENST00000641247 FLG2Q5D862 2391 aaPredicted RBP6.82□□□□□ -1.32
PHGDH-212ENST00000641247 HMCN2Q8NDA2 5059 aa6.81□□□□□ -1.32
PHGDH-212ENST00000641247 PGPA6NDG6 321 aa6.81□□□□□ -1.32
PHGDH-212ENST00000641247 PGPEP1LA6NFU8 196 aa6.81□□□□□ -1.32
PHGDH-212ENST00000641247 TMEM262E9PQX1 116 aa6.81□□□□□ -1.32
PHGDH-212ENST00000641247 H3BUT2 72 aa6.81□□□□□ -1.32
PHGDH-212ENST00000641247 SPART-AS1P0CW21 52 aa6.81□□□□□ -1.32
PHGDH-212ENST00000641247 HLA-DRB4P13762 266 aa6.81□□□□□ -1.32
PHGDH-212ENST00000641247 HTN3P15516 51 aa6.81□□□□□ -1.32
PHGDH-212ENST00000641247 KIR3DS1Q14943 382 aa6.81□□□□□ -1.32
PHGDH-212ENST00000641247 SIGLEC15Q6ZMC9 328 aa6.81□□□□□ -1.32
PHGDH-212ENST00000641247 VGLL1Q99990 258 aa6.81□□□□□ -1.32
PHGDH-212ENST00000641247 KRTAP1-5Q9BYS1 174 aa6.81□□□□□ -1.32
PHGDH-212ENST00000641247 DKK2Q9UBU2 259 aa6.81□□□□□ -1.32
PHGDH-212ENST00000641247 EPDR1Q9UM22 224 aa6.81□□□□□ -1.32
PHGDH-212ENST00000641247 HLA-DRB4X5D2U9 266 aa6.81□□□□□ -1.32
PHGDH-212ENST00000641247 TRAV2A0A0B4J234 112 aa6.8□□□□□ -1.32
PHGDH-212ENST00000641247 IGHV1-24A0A0C4DH33 117 aa6.8□□□□□ -1.32
PHGDH-212ENST00000641247 A0A1B0GXF2 115 aa6.8□□□□□ -1.32
PHGDH-212ENST00000641247 SLC25A5P05141 298 aaKnown RBP6.8□□□□□ -1.32
PHGDH-212ENST00000641247 ZNF688P0C7X2 276 aa6.8□□□□□ -1.32
PHGDH-212ENST00000641247 RPL11P62913 178 aaKnown RBP6.8□□□□□ -1.32
PHGDH-212ENST00000641247 SLAQ13239 276 aa6.8□□□□□ -1.32
PHGDH-212ENST00000641247 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.8□□□□□ -1.32
PHGDH-212ENST00000641247 EXOC3-AS1Q8N2X6 119 aa6.8□□□□□ -1.32
PHGDH-212ENST00000641247 NUP35Q8NFH5 326 aa6.8□□□□□ -1.32
PHGDH-212ENST00000641247 DCANP1Q8TF63 244 aa6.8□□□□□ -1.32
PHGDH-212ENST00000641247 IGF2BP2-AS1Q96M15 143 aa6.8□□□□□ -1.32
PHGDH-212ENST00000641247 RNASE7Q9H1E1 156 aaKnown RBP6.8□□□□□ -1.32
PHGDH-212ENST00000641247 AAMDCQ9H7C9 122 aa6.8□□□□□ -1.32
PHGDH-212ENST00000641247 AP5S1Q9NUS5 200 aa6.8□□□□□ -1.32
PHGDH-212ENST00000641247 SPANXCQ9NY87 97 aa6.8□□□□□ -1.32
PHGDH-212ENST00000641247 XCL2Q9UBD3 114 aa6.8□□□□□ -1.32
PHGDH-212ENST00000641247 SERTM2A0A1B0GWG4 89 aa6.79□□□□□ -1.32
PHGDH-212ENST00000641247 FBLL1A6NHQ2 334 aaKnown RBP6.79□□□□□ -1.32
PHGDH-212ENST00000641247 PEX7O00628 323 aa6.79□□□□□ -1.32
PHGDH-212ENST00000641247 SMR3BP02814 79 aaPredicted RBP6.79□□□□□ -1.32
PHGDH-212ENST00000641247 TCRAP04437 139 aa6.79□□□□□ -1.32
PHGDH-212ENST00000641247 SMAGPQ0VAQ4 97 aa6.79□□□□□ -1.32
PHGDH-212ENST00000641247 FAM222AQ5U5X8 452 aa6.79□□□□□ -1.32
PHGDH-212ENST00000641247 Q6ZVH6 145 aa6.79□□□□□ -1.32
PHGDH-212ENST00000641247 FMC1Q96HJ9 113 aa6.79□□□□□ -1.32
PHGDH-212ENST00000641247 SLC50A1Q9BRV3 221 aa6.79□□□□□ -1.32
PHGDH-212ENST00000641247 RPP21Q9H633 154 aaKnown RBP6.79□□□□□ -1.32
PHGDH-212ENST00000641247 GEMIN7Q9H840 131 aaKnown RBP6.79□□□□□ -1.32
PHGDH-212ENST00000641247 hDV102S1A0JD36 115 aa6.78□□□□□ -1.32
PHGDH-212ENST00000641247 HIGD1CA8MV81 97 aa6.78□□□□□ -1.32
PHGDH-212ENST00000641247 SPINK4O60575 86 aa6.78□□□□□ -1.32
PHGDH-212ENST00000641247 P01737 135 aa6.78□□□□□ -1.32
PHGDH-212ENST00000641247 GNG5P63218 68 aa6.78□□□□□ -1.32
PHGDH-212ENST00000641247 PRSS3P2Q8NHM4 247 aa6.78□□□□□ -1.32
PHGDH-212ENST00000641247 GTSF1LQ9H1H1 148 aa6.78□□□□□ -1.32
PHGDH-212ENST00000641247 LINC00588Q9Y4M8 146 aa6.78□□□□□ -1.32
PHGDH-212ENST00000641247 KLF12Q9Y4X4 402 aa6.78□□□□□ -1.32
PHGDH-212ENST00000641247 TRAV8-2A0A0B4J237 113 aa6.77□□□□□ -1.33
PHGDH-212ENST00000641247 TRBV6-1A0A0K0K1D8 114 aa6.77□□□□□ -1.33
PHGDH-212ENST00000641247 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.77□□□□□ -1.33
PHGDH-212ENST00000641247 CRYBA4P53673 196 aa6.77□□□□□ -1.33
PHGDH-212ENST00000641247 FOXA3P55318 350 aaPredicted RBP6.77□□□□□ -1.33
PHGDH-212ENST00000641247 FXYD7P58549 80 aa6.77□□□□□ -1.33
PHGDH-212ENST00000641247 DEFB1P60022 68 aa6.77□□□□□ -1.33
PHGDH-212ENST00000641247 GATD1Q8NB37 220 aa6.77□□□□□ -1.33
PHGDH-212ENST00000641247 MRPL53Q96EL3 112 aaKnown RBP6.77□□□□□ -1.33
PHGDH-212ENST00000641247 C16orf92Q96LL3 132 aa6.77□□□□□ -1.33
PHGDH-212ENST00000641247 LINC00479Q96M42 142 aa6.77□□□□□ -1.33
PHGDH-212ENST00000641247 H3BMM0 161 aa6.76□□□□□ -1.33
PHGDH-212ENST00000641247 J3QL48 77 aa6.76□□□□□ -1.33
PHGDH-212ENST00000641247 M0R3E3 92 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms