RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 TWIST1Q15672 202 aa9.77□□□□□ -0.85
HLA-C-210ENST00000640219 C12orf74Q32Q52 190 aa9.77□□□□□ -0.85
HLA-C-210ENST00000640219 TMEM78Q5T7P6 136 aa9.77□□□□□ -0.85
HLA-C-210ENST00000640219 SMIM15Q7Z3B0 74 aa9.77□□□□□ -0.85
HLA-C-210ENST00000640219 CSNK1G2-AS1Q8NCQ2 148 aa9.77□□□□□ -0.85
HLA-C-210ENST00000640219 VGLL1Q99990 258 aa9.77□□□□□ -0.85
HLA-C-210ENST00000640219 EPM2AB3EWF7 344 aa9.76□□□□□ -0.85
HLA-C-210ENST00000640219 G0S2P27469 103 aa9.76□□□□□ -0.85
HLA-C-210ENST00000640219 CKS2P33552 79 aa9.76□□□□□ -0.85
HLA-C-210ENST00000640219 CELA1Q9UNI1 258 aa9.76□□□□□ -0.85
HLA-C-210ENST00000640219 IGHV3OR16-12A0A075B7B8 117 aa9.75□□□□□ -0.85
HLA-C-210ENST00000640219 D6R8Y8 96 aa9.75□□□□□ -0.85
HLA-C-210ENST00000640219 ID1P41134 155 aa9.75□□□□□ -0.85
HLA-C-210ENST00000640219 SLC25A34Q6PIV7 304 aa9.75□□□□□ -0.85
HLA-C-210ENST00000640219 FOXI2Q6ZQN5 318 aa9.75□□□□□ -0.85
HLA-C-210ENST00000640219 SPATA12Q7Z6I5 190 aa9.75□□□□□ -0.85
HLA-C-210ENST00000640219 TIMM8BQ9Y5J9 83 aaPredicted RBP9.75□□□□□ -0.85
HLA-C-210ENST00000640219 A0A0J9YX75 114 aa9.74□□□□□ -0.85
HLA-C-210ENST00000640219 DLEU1O43261 78 aa9.74□□□□□ -0.85
HLA-C-210ENST00000640219 PRM2P04554 102 aa9.74□□□□□ -0.85
HLA-C-210ENST00000640219 IGLC6P0CF74 106 aa9.74□□□□□ -0.85
HLA-C-210ENST00000640219 ZNF138P52744 262 aa9.74□□□□□ -0.85
HLA-C-210ENST00000640219 LINC01559Q495D7 138 aa9.74□□□□□ -0.85
HLA-C-210ENST00000640219 MRPL51Q4U2R6 128 aaKnown RBP9.74□□□□□ -0.85
HLA-C-210ENST00000640219 MORN3Q6PF18 240 aaPredicted RBP9.74□□□□□ -0.85
HLA-C-210ENST00000640219 MAP1LC3AQ9H492 121 aa9.74□□□□□ -0.85
HLA-C-210ENST00000640219 GOLT1BQ9Y3E0 138 aa9.74□□□□□ -0.85
HLA-C-210ENST00000640219 DNAH5Q8TE73 4624 aa9.74□□□□□ -0.85
HLA-C-210ENST00000640219 LOC389332A0A1B0GUA5 103 aa9.73□□□□□ -0.85
HLA-C-210ENST00000640219 IFI27P40305 119 aaPredicted RBP9.73□□□□□ -0.85
HLA-C-210ENST00000640219 LINC01545Q5VT33 79 aa9.73□□□□□ -0.85
HLA-C-210ENST00000640219 AMN1Q8IY45 258 aa9.73□□□□□ -0.85
HLA-C-210ENST00000640219 ZNF738Q8NE65 137 aa9.73□□□□□ -0.85
HLA-C-210ENST00000640219 Q8TAT8 98 aa9.73□□□□□ -0.85
HLA-C-210ENST00000640219 HBDP02042 147 aa9.72□□□□□ -0.85
HLA-C-210ENST00000640219 CACNG7P62955 275 aa9.72□□□□□ -0.85
HLA-C-210ENST00000640219 ERCC8Q13216 396 aa9.72□□□□□ -0.85
HLA-C-210ENST00000640219 MAJINQ3KP22 176 aa9.72□□□□□ -0.85
HLA-C-210ENST00000640219 LINC00173Q6ZV60 143 aa9.72□□□□□ -0.85
HLA-C-210ENST00000640219 TMEM208Q9BTX3 173 aa9.72□□□□□ -0.85
HLA-C-210ENST00000640219 PPP1R14DQ9NXH3 145 aa9.72□□□□□ -0.85
HLA-C-210ENST00000640219 UBR4Q5T4S7 5183 aa9.71□□□□□ -0.85
HLA-C-210ENST00000640219 PRAC2D3DTV9 90 aa9.71□□□□□ -0.86
HLA-C-210ENST00000640219 H0Y8G0 127 aa9.71□□□□□ -0.86
HLA-C-210ENST00000640219 HINT1P49773 126 aaPredicted RBP9.71□□□□□ -0.86
HLA-C-210ENST00000640219 ZNF80P51504 273 aaPredicted RBP9.71□□□□□ -0.86
HLA-C-210ENST00000640219 EMP1P54849 157 aa9.71□□□□□ -0.86
HLA-C-210ENST00000640219 SPINK13Q1W4C9 94 aa9.71□□□□□ -0.86
HLA-C-210ENST00000640219 AMTNQ6UX39 209 aa9.71□□□□□ -0.86
HLA-C-210ENST00000640219 C9orf47Q6ZRZ4 202 aa9.71□□□□□ -0.86
HLA-C-210ENST00000640219 ORAOV1Q8WV07 137 aa9.71□□□□□ -0.86
HLA-C-210ENST00000640219 NXT2Q9NPJ8 142 aaKnown RBP9.71□□□□□ -0.86
HLA-C-210ENST00000640219 LENEPQ9Y5L5 61 aa9.71□□□□□ -0.86
HLA-C-210ENST00000640219 TRAV12-2A0A075B6T6 113 aa9.7□□□□□ -0.86
HLA-C-210ENST00000640219 hDV102S1A0JD36 115 aa9.7□□□□□ -0.86
HLA-C-210ENST00000640219 C1orf158Q8N1D5 194 aa9.7□□□□□ -0.86
HLA-C-210ENST00000640219 OR8A1Q8NGG7 326 aa9.7□□□□□ -0.86
HLA-C-210ENST00000640219 OR10J6PQ8NGY7 276 aa9.7□□□□□ -0.86
HLA-C-210ENST00000640219 LINC00477Q96M19 166 aa9.7□□□□□ -0.86
HLA-C-210ENST00000640219 CNFNQ9BYD5 112 aa9.7□□□□□ -0.86
HLA-C-210ENST00000640219 AGPAT4-IT1Q9H0P7 198 aa9.7□□□□□ -0.86
HLA-C-210ENST00000640219 KIR3DS1Q14943 382 aa9.69□□□□□ -0.86
HLA-C-210ENST00000640219 STPG4Q8N801 248 aa9.69□□□□□ -0.86
HLA-C-210ENST00000640219 C6orf223Q8N319 242 aa9.68□□□□□ -0.86
HLA-C-210ENST00000640219 IFI27L1Q96BM0 104 aa9.68□□□□□ -0.86
HLA-C-210ENST00000640219 MUC21A0A0G2JKD1 596 aa9.67□□□□□ -0.86
HLA-C-210ENST00000640219 MUC21A0A140T8X8 626 aa9.67□□□□□ -0.86
HLA-C-210ENST00000640219 A8MTW9 85 aa9.67□□□□□ -0.86
HLA-C-210ENST00000640219 NPYP01303 97 aa9.67□□□□□ -0.86
HLA-C-210ENST00000640219 MUC21Q5SSG8 566 aa9.67□□□□□ -0.86
HLA-C-210ENST00000640219 SAMD13Q5VXD3 122 aa9.67□□□□□ -0.86
HLA-C-210ENST00000640219 C1QTNF4Q9BXJ3 329 aa9.67□□□□□ -0.86
HLA-C-210ENST00000640219 NACAE9PAV3 2078 aa9.67□□□□□ -0.86
HLA-C-210ENST00000640219 J3KRW8 73 aa9.66□□□□□ -0.86
HLA-C-210ENST00000640219 TNFRSF6BO95407 300 aa9.66□□□□□ -0.86
HLA-C-210ENST00000640219 COX8AP10176 69 aa9.66□□□□□ -0.86
HLA-C-210ENST00000640219 FCER1GP30273 86 aa9.66□□□□□ -0.86
HLA-C-210ENST00000640219 SPANXN1Q5VSR9 72 aa9.66□□□□□ -0.86
HLA-C-210ENST00000640219 TRAV21A0A0B4J279 112 aa9.65□□□□□ -0.86
HLA-C-210ENST00000640219 LINC01546A6NGU7 62 aa9.65□□□□□ -0.86
HLA-C-210ENST00000640219 SMKR1H3BMG3 65 aa9.65□□□□□ -0.86
HLA-C-210ENST00000640219 Q8N8P6 123 aa9.65□□□□□ -0.86
HLA-C-210ENST00000640219 RNF185Q96GF1 192 aa9.65□□□□□ -0.86
HLA-C-210ENST00000640219 C18orf15Q96N68 181 aa9.65□□□□□ -0.86
HLA-C-210ENST00000640219 COX11Q9Y6N1 276 aa9.65□□□□□ -0.86
HLA-C-210ENST00000640219 SRRM2Q9UQ35 2752 aaKnown RBP9.65□□□□□ -0.86
HLA-C-210ENST00000640219 MYCBP2O75592 4640 aa9.65□□□□□ -0.87
HLA-C-210ENST00000640219 NBDYA0A0U1RRE5 68 aa9.64□□□□□ -0.87
HLA-C-210ENST00000640219 ATP5LO75964 103 aa9.64□□□□□ -0.87
HLA-C-210ENST00000640219 NCR2O95944 276 aa9.64□□□□□ -0.87
HLA-C-210ENST00000640219 NUDT3O95989 172 aa9.64□□□□□ -0.87
HLA-C-210ENST00000640219 SPART-AS1P0CW21 52 aa9.64□□□□□ -0.87
HLA-C-210ENST00000640219 LEPP41159 167 aa9.64□□□□□ -0.87
HLA-C-210ENST00000640219 MRAP2Q96G30 205 aa9.64□□□□□ -0.87
HLA-C-210ENST00000640219 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
HLA-C-210ENST00000640219 IGKV3D-20A0A0C4DH25 116 aa9.63□□□□□ -0.87
HLA-C-210ENST00000640219 TRBV7-9A0A0J9YWB2 115 aa9.63□□□□□ -0.87
HLA-C-210ENST00000640219 SIVA1O15304 175 aa9.63□□□□□ -0.87
HLA-C-210ENST00000640219 DUSP14O95147 198 aaKnown RBP9.63□□□□□ -0.87
HLA-C-210ENST00000640219 AZU1P20160 251 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms