RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-223	ENST00000640001		H3BRM9	83 aa		5.78	□□□□□ -1.48
HNRNPU-223	ENST00000640001	PRM2	P04554	102 aa		5.78	□□□□□ -1.48
HNRNPU-223	ENST00000640001	BAALC	Q8WXS3	180 aa		5.78	□□□□□ -1.48
HNRNPU-223	ENST00000640001	TOMM6	Q96B49	74 aa		5.78	□□□□□ -1.48
HNRNPU-223	ENST00000640001	TRAV2	A0A0B4J234	112 aa		5.78	□□□□□ -1.48
HNRNPU-223	ENST00000640001	MYMX	A0A1B0GTQ4	84 aa		5.78	□□□□□ -1.48
HNRNPU-223	ENST00000640001	LGALS9	O00182	355 aa		5.78	□□□□□ -1.48
HNRNPU-223	ENST00000640001	C4orf3	Q8WVX3	66 aa		5.78	□□□□□ -1.48
HNRNPU-223	ENST00000640001	TMEM141	Q96I45	108 aa		5.78	□□□□□ -1.48
HNRNPU-223	ENST00000640001	PSMG3-AS1	Q96PY0	264 aa		5.78	□□□□□ -1.48
HNRNPU-223	ENST00000640001	SPX	Q9BT56	116 aa		5.78	□□□□□ -1.48
HNRNPU-223	ENST00000640001	C9orf118	A6NHY6	69 aa		5.77	□□□□□ -1.49
HNRNPU-223	ENST00000640001		M0R2P5	195 aa		5.77	□□□□□ -1.49
HNRNPU-223	ENST00000640001	SIVA1	O15304	175 aa		5.77	□□□□□ -1.49
HNRNPU-223	ENST00000640001		Q6ZSV7	163 aa		5.77	□□□□□ -1.49
HNRNPU-223	ENST00000640001	IGHV4-4	A0A075B6R2	117 aa		5.77	□□□□□ -1.49
HNRNPU-223	ENST00000640001		A0A1B0GWB2	263 aa		5.77	□□□□□ -1.49
HNRNPU-223	ENST00000640001	FXYD2	P54710	66 aa		5.77	□□□□□ -1.49
HNRNPU-223	ENST00000640001	GAGE12B	A1L429	117 aa		5.77	□□□□□ -1.49
HNRNPU-223	ENST00000640001		K7EP13	123 aa		5.77	□□□□□ -1.49
HNRNPU-223	ENST00000640001		P0DMU3	169 aa		5.77	□□□□□ -1.49
HNRNPU-223	ENST00000640001	FAM231A	P0DMU4	169 aa		5.77	□□□□□ -1.49
HNRNPU-223	ENST00000640001	FAM231C	P0DMU5	169 aa		5.77	□□□□□ -1.49
HNRNPU-223	ENST00000640001	ADAMTSL5	Q6ZMM2	481 aa		5.77	□□□□□ -1.49
HNRNPU-223	ENST00000640001	OPRPN	Q99935	248 aa	Predicted RBP	5.77	□□□□□ -1.49
HNRNPU-223	ENST00000640001	BRI3	O95415	125 aa		5.76	□□□□□ -1.49
HNRNPU-223	ENST00000640001	C2orf91	Q6ZV80	131 aa		5.76	□□□□□ -1.49
HNRNPU-223	ENST00000640001	MAP6D1	Q9H9H5	199 aa		5.76	□□□□□ -1.49
HNRNPU-223	ENST00000640001	FN1	P02751	2386 aa	Known RBP	5.76	□□□□□ -1.49
HNRNPU-223	ENST00000640001	JMJD1C	Q15652	2540 aa		5.76	□□□□□ -1.49
HNRNPU-223	ENST00000640001	AGRN	O00468	2067 aa		5.76	□□□□□ -1.49
HNRNPU-223	ENST00000640001	TRGV4	A0A0C4DH28	118 aa		5.76	□□□□□ -1.49
HNRNPU-223	ENST00000640001	AZU1	P20160	251 aa		5.76	□□□□□ -1.49
HNRNPU-223	ENST00000640001	FASN	P49327	2511 aa	Known RBP	5.76	□□□□□ -1.49
HNRNPU-223	ENST00000640001		H3BMM0	161 aa		5.76	□□□□□ -1.49
HNRNPU-223	ENST00000640001	CEND1	Q8N111	149 aa		5.76	□□□□□ -1.49
HNRNPU-223	ENST00000640001	ZNRF2	Q8NHG8	242 aa		5.76	□□□□□ -1.49
HNRNPU-223	ENST00000640001	TSSC4	Q9Y5U2	329 aa	Predicted RBP	5.76	□□□□□ -1.49
HNRNPU-223	ENST00000640001	USP24	Q9UPU5	2620 aa		5.76	□□□□□ -1.49
HNRNPU-223	ENST00000640001		A0A0U1RRA0	63 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	RHOD	O00212	210 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	RPL36A	P83881	106 aa	Known RBP	5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	RPL36AL	Q969Q0	106 aa	Known RBP	5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	TRAV12-1	A0A0B4J245	112 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	GAGE12J	A6NER3	117 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	C11orf86	A6NJI1	115 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	GAGE4	Q13068	117 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	GAGE5	Q13069	117 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	GAGE13	Q4V321	117 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	ODF3	Q96PU9	254 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	IGKV2-29	A2NJV5	120 aa	Predicted RBP	5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	NPC2	P61916	151 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	KLK9	Q2XQG4	91 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	GAGE7	O76087	117 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	GAGE12F	P0CL80	117 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	GAGE12G	P0CL81	117 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	GAGE12I	P0CL82	117 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	RHOH	Q15669	191 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	DEFB114	Q30KQ6	69 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	OR5A1	Q8NGJ0	315 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	SIGMAR1	Q99720	223 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	PGPEP1	Q9NXJ5	209 aa		5.75	□□□□□ -1.49
HNRNPU-223	ENST00000640001	ADARB2-AS1	A8MUL3	147 aa		5.74	□□□□□ -1.49
HNRNPU-223	ENST00000640001	PROK1	P58294	105 aa		5.74	□□□□□ -1.49
HNRNPU-223	ENST00000640001	MEIG1	Q5JSS6	88 aa		5.74	□□□□□ -1.49
HNRNPU-223	ENST00000640001	TRAV13-1	A0A0B4J241	112 aa		5.74	□□□□□ -1.49
HNRNPU-223	ENST00000640001		A0A0J9YXV3	536 aa		5.74	□□□□□ -1.49
HNRNPU-223	ENST00000640001		A0A1W2PPM0	123 aa		5.74	□□□□□ -1.49
HNRNPU-223	ENST00000640001	RNASE1	P07998	156 aa	Known RBP	5.74	□□□□□ -1.49
HNRNPU-223	ENST00000640001	MAPKAPK5-AS1	Q8N8E1	139 aa		5.74	□□□□□ -1.49
HNRNPU-223	ENST00000640001	CST9L	Q9H4G1	147 aa		5.74	□□□□□ -1.49
HNRNPU-223	ENST00000640001	COX6C	P09669	75 aa		5.74	□□□□□ -1.49
HNRNPU-223	ENST00000640001	DEFB130B	P0DP73	79 aa		5.74	□□□□□ -1.49
HNRNPU-223	ENST00000640001	DEFB130A	P0DP74	79 aa		5.74	□□□□□ -1.49
HNRNPU-223	ENST00000640001	TMEM101	Q96IK0	257 aa		5.74	□□□□□ -1.49
HNRNPU-223	ENST00000640001	TIMM21	Q9BVV7	248 aa		5.74	□□□□□ -1.49
HNRNPU-223	ENST00000640001	CFAP46	Q8IYW2	2715 aa		5.74	□□□□□ -1.49
HNRNPU-223	ENST00000640001	IGLV2-18	A0A075B6J9	118 aa		5.73	□□□□□ -1.49
HNRNPU-223	ENST00000640001		J3QQQ9	107 aa		5.73	□□□□□ -1.49
HNRNPU-223	ENST00000640001	NEXN-AS1	Q8NBZ9	246 aa		5.73	□□□□□ -1.49
HNRNPU-223	ENST00000640001	PLEKHB2	Q96CS7	222 aa		5.73	□□□□□ -1.49
HNRNPU-223	ENST00000640001	NOP10	Q9NPE3	64 aa	Known RBP	5.73	□□□□□ -1.49
HNRNPU-223	ENST00000640001	TMEM262	E9PQX1	116 aa		5.73	□□□□□ -1.49
HNRNPU-223	ENST00000640001	CEMP1	Q6PRD7	247 aa	Predicted RBP	5.73	□□□□□ -1.49
HNRNPU-223	ENST00000640001	TMEM86B	Q8N661	226 aa		5.73	□□□□□ -1.49
HNRNPU-223	ENST00000640001	TOMM7	Q9P0U1	55 aa		5.73	□□□□□ -1.49
HNRNPU-223	ENST00000640001		K7EP34	96 aa		5.73	□□□□□ -1.49
HNRNPU-223	ENST00000640001		M0QY20	66 aa		5.73	□□□□□ -1.49
HNRNPU-223	ENST00000640001	CMC4	P56277	68 aa	Predicted RBP	5.73	□□□□□ -1.49
HNRNPU-223	ENST00000640001	C12orf74	Q32Q52	190 aa		5.73	□□□□□ -1.49
HNRNPU-223	ENST00000640001	GTSF1L	Q9H1H1	148 aa		5.73	□□□□□ -1.49
HNRNPU-223	ENST00000640001	HRNR	Q86YZ3	2850 aa	Predicted RBP	5.73	□□□□□ -1.49
HNRNPU-223	ENST00000640001	SMG1	Q96Q15	3661 aa	Known RBP	5.72	□□□□□ -1.49
HNRNPU-223	ENST00000640001	FGF6	P10767	208 aa		5.72	□□□□□ -1.49
HNRNPU-223	ENST00000640001	AMTN	Q6UX39	209 aa		5.72	□□□□□ -1.49
HNRNPU-223	ENST00000640001		E9PLD3	99 aa		5.72	□□□□□ -1.49
HNRNPU-223	ENST00000640001	CRYGD	P07320	174 aa		5.72	□□□□□ -1.49
HNRNPU-223	ENST00000640001	C9orf85	Q96MD7	179 aa		5.72	□□□□□ -1.49
HNRNPU-223	ENST00000640001	CHCHD5	Q9BSY4	110 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms