RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 IFI27P40305 119 aaPredicted RBP8.37□□□□□ -1.07
CLN6-223ENST00000637823 LINC00310P59036 64 aa8.37□□□□□ -1.07
CLN6-223ENST00000637823 SUMO2P61956 95 aaKnown RBP8.37□□□□□ -1.07
CLN6-223ENST00000637823 RPL32P62910 135 aaKnown RBP8.37□□□□□ -1.07
CLN6-223ENST00000637823 RNASEKQ6P5S7 137 aaKnown RBP8.37□□□□□ -1.07
CLN6-223ENST00000637823 Q6ZSN1 163 aa8.37□□□□□ -1.07
CLN6-223ENST00000637823 FA2HQ7L5A8 372 aa8.37□□□□□ -1.07
CLN6-223ENST00000637823 Q8N8P6 123 aa8.37□□□□□ -1.07
CLN6-223ENST00000637823 URB1-AS1Q96HZ7 61 aa8.37□□□□□ -1.07
CLN6-223ENST00000637823 SPATA25Q9BR10 227 aa8.37□□□□□ -1.07
CLN6-223ENST00000637823 TM2D3Q9BRN9 247 aa8.37□□□□□ -1.07
CLN6-223ENST00000637823 RETNQ9HD89 108 aa8.37□□□□□ -1.07
CLN6-223ENST00000637823 LOC105371267A0A1B0GV96 52 aa8.36□□□□□ -1.07
CLN6-223ENST00000637823 LINC01546A6NGU7 62 aa8.36□□□□□ -1.07
CLN6-223ENST00000637823 S100A2P29034 98 aa8.36□□□□□ -1.07
CLN6-223ENST00000637823 DNAJC30Q96LL9 226 aa8.36□□□□□ -1.07
CLN6-223ENST00000637823 C11orf68Q9H3H3 251 aaKnown RBP8.36□□□□□ -1.07
CLN6-223ENST00000637823 IGLV2-18A0A075B6J9 118 aa8.35□□□□□ -1.07
CLN6-223ENST00000637823 TRGV4A0A0C4DH28 118 aa8.35□□□□□ -1.07
CLN6-223ENST00000637823 VCYO14598 125 aa8.35□□□□□ -1.07
CLN6-223ENST00000637823 HSBP1O75506 76 aa8.35□□□□□ -1.07
CLN6-223ENST00000637823 POLR2KP53803 58 aaKnown RBP8.35□□□□□ -1.07
CLN6-223ENST00000637823 DAD1P61803 113 aa8.35□□□□□ -1.07
CLN6-223ENST00000637823 FHL2Q14192 279 aa8.35□□□□□ -1.07
CLN6-223ENST00000637823 PDZD11Q5EBL8 140 aa8.35□□□□□ -1.07
CLN6-223ENST00000637823 MRAPQ8TCY5 172 aa8.35□□□□□ -1.07
CLN6-223ENST00000637823 SMIM2Q9BVW6 85 aa8.35□□□□□ -1.07
CLN6-223ENST00000637823 AP5S1Q9NUS5 200 aa8.35□□□□□ -1.07
CLN6-223ENST00000637823 TNFRSF18Q9Y5U5 241 aa8.35□□□□□ -1.07
CLN6-223ENST00000637823 TRBV10-1A0A0K0K1A3 114 aa8.34□□□□□ -1.07
CLN6-223ENST00000637823 K7EMI3 77 aa8.34□□□□□ -1.07
CLN6-223ENST00000637823 TMEM18Q96B42 140 aa8.34□□□□□ -1.07
CLN6-223ENST00000637823 PACRGQ96M98 296 aaPredicted RBP8.34□□□□□ -1.07
CLN6-223ENST00000637823 TMEM70Q9BUB7 260 aa8.34□□□□□ -1.07
CLN6-223ENST00000637823 TRBV27A0A0K0K1C4 114 aa8.33□□□□□ -1.08
CLN6-223ENST00000637823 TRBV6-4A0A1B0GX49 114 aa8.33□□□□□ -1.08
CLN6-223ENST00000637823 SDHAF1A6NFY7 115 aa8.33□□□□□ -1.08
CLN6-223ENST00000637823 IFITM10A6NMD0 228 aa8.33□□□□□ -1.08
CLN6-223ENST00000637823 K7EQD1 137 aa8.33□□□□□ -1.08
CLN6-223ENST00000637823 P0DMU3 169 aa8.33□□□□□ -1.08
CLN6-223ENST00000637823 FAM231AP0DMU4 169 aa8.33□□□□□ -1.08
CLN6-223ENST00000637823 FAM231CP0DMU5 169 aa8.33□□□□□ -1.08
CLN6-223ENST00000637823 SLC25A29Q8N8R3 303 aa8.33□□□□□ -1.08
CLN6-223ENST00000637823 NEXN-AS1Q8NBZ9 246 aa8.33□□□□□ -1.08
CLN6-223ENST00000637823 HIST1H2BLQ99880 126 aa8.33□□□□□ -1.08
CLN6-223ENST00000637823 ZMAT4Q9H898 229 aa8.33□□□□□ -1.08
CLN6-223ENST00000637823 CELA1Q9UNI1 258 aa8.33□□□□□ -1.08
CLN6-223ENST00000637823 TCAPO15273 167 aa8.32□□□□□ -1.08
CLN6-223ENST00000637823 FABP4P15090 132 aa8.32□□□□□ -1.08
CLN6-223ENST00000637823 AMTP48728 403 aa8.32□□□□□ -1.08
CLN6-223ENST00000637823 LAGE3Q14657 143 aa8.32□□□□□ -1.08
CLN6-223ENST00000637823 FAM19A2Q8N3H0 131 aa8.32□□□□□ -1.08
CLN6-223ENST00000637823 B9D2Q9BPU9 175 aa8.32□□□□□ -1.08
CLN6-223ENST00000637823 HHLA3Q9XRX5 114 aa8.32□□□□□ -1.08
CLN6-223ENST00000637823 IGHV1-24A0A0C4DH33 117 aa8.31□□□□□ -1.08
CLN6-223ENST00000637823 I3L3M4 83 aa8.31□□□□□ -1.08
CLN6-223ENST00000637823 ATP5G1P05496 136 aa8.31□□□□□ -1.08
CLN6-223ENST00000637823 RPL36AP83881 106 aaKnown RBP8.31□□□□□ -1.08
CLN6-223ENST00000637823 ORMDL2Q53FV1 153 aa8.31□□□□□ -1.08
CLN6-223ENST00000637823 RPL36ALQ969Q0 106 aaKnown RBP8.31□□□□□ -1.08
CLN6-223ENST00000637823 KIR2DL4Q99706 377 aa8.31□□□□□ -1.08
CLN6-223ENST00000637823 PRADC1Q9BSG0 188 aa8.31□□□□□ -1.08
CLN6-223ENST00000637823 Q9UF83 564 aa8.31□□□□□ -1.08
CLN6-223ENST00000637823 TRBV7-3A0A075B6L6 115 aa8.3□□□□□ -1.08
CLN6-223ENST00000637823 A0A0J9YWU9 116 aa8.3□□□□□ -1.08
CLN6-223ENST00000637823 FCER1GP30273 86 aa8.3□□□□□ -1.08
CLN6-223ENST00000637823 RHOHQ15669 191 aa8.3□□□□□ -1.08
CLN6-223ENST00000637823 C12orf74Q32Q52 190 aa8.3□□□□□ -1.08
CLN6-223ENST00000637823 ZNRF2Q8NHG8 242 aa8.3□□□□□ -1.08
CLN6-223ENST00000637823 PRO0255Q9UI72 69 aa8.3□□□□□ -1.08
CLN6-223ENST00000637823 TENM3Q9P273 2699 aa8.29□□□□□ -1.08
CLN6-223ENST00000637823 G0S2P27469 103 aa8.29□□□□□ -1.08
CLN6-223ENST00000637823 CRYBA4P53673 196 aa8.29□□□□□ -1.08
CLN6-223ENST00000637823 PMCHL1Q16048 86 aa8.29□□□□□ -1.08
CLN6-223ENST00000637823 NUDT3O95989 172 aa8.28□□□□□ -1.08
CLN6-223ENST00000637823 TSHBP01222 138 aa8.28□□□□□ -1.08
CLN6-223ENST00000637823 HBDP02042 147 aa8.28□□□□□ -1.08
CLN6-223ENST00000637823 UBE2D3P61077 147 aa8.28□□□□□ -1.08
CLN6-223ENST00000637823 UBE2D2P62837 147 aa8.28□□□□□ -1.08
CLN6-223ENST00000637823 NEGR1Q7Z3B1 354 aa8.28□□□□□ -1.08
CLN6-223ENST00000637823 DAZ4Q86SG3 579 aaKnown RBP8.28□□□□□ -1.08
CLN6-223ENST00000637823 OR10D4PQ8NGN7 298 aa8.28□□□□□ -1.08
CLN6-223ENST00000637823 DAZ3Q9NR90 486 aaKnown RBP8.28□□□□□ -1.08
CLN6-223ENST00000637823 A0A096LNJ9 63 aa8.27□□□□□ -1.09
CLN6-223ENST00000637823 GAGE12JA6NER3 117 aa8.27□□□□□ -1.09
CLN6-223ENST00000637823 LINC01549A6NIU2 74 aa8.27□□□□□ -1.09
CLN6-223ENST00000637823 F5H768 121 aa8.27□□□□□ -1.09
CLN6-223ENST00000637823 PAX4O43316 350 aa8.27□□□□□ -1.09
CLN6-223ENST00000637823 LEPROTL1O95214 131 aa8.27□□□□□ -1.09
CLN6-223ENST00000637823 NHLRC4P0CG21 123 aaPredicted RBP8.27□□□□□ -1.09
CLN6-223ENST00000637823 AKR1D1P51857 326 aa8.27□□□□□ -1.09
CLN6-223ENST00000637823 GAGE1Q13065 139 aa8.27□□□□□ -1.09
CLN6-223ENST00000637823 GAGE4Q13068 117 aa8.27□□□□□ -1.09
CLN6-223ENST00000637823 GAGE5Q13069 117 aa8.27□□□□□ -1.09
CLN6-223ENST00000637823 GAGE13Q4V321 117 aa8.27□□□□□ -1.09
CLN6-223ENST00000637823 C11orf45Q8TAV5 145 aa8.27□□□□□ -1.09
CLN6-223ENST00000637823 HSPB8Q9UJY1 196 aa8.27□□□□□ -1.09
CLN6-223ENST00000637823 LOC100131303A0A0U1RQF7 123 aa8.26□□□□□ -1.09
CLN6-223ENST00000637823 DEFA6Q01524 100 aa8.26□□□□□ -1.09
CLN6-223ENST00000637823 PHLDA1Q8WV24 401 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 186.4 ms