RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 KNCNA6PVL3 124 aa13.89□□□□□ -0.19
CLN5-219ENST00000637537 TNFRSF6BO95407 300 aa13.89□□□□□ -0.19
CLN5-219ENST00000637537 CRYBA4P53673 196 aa13.89□□□□□ -0.19
CLN5-219ENST00000637537 CITED2Q99967 270 aaPredicted RBP13.89□□□□□ -0.19
CLN5-219ENST00000637537 PEMTQ9UBM1 199 aa13.89□□□□□ -0.19
CLN5-219ENST00000637537 IGHV4-4A0A075B6R2 117 aa13.88□□□□□ -0.19
CLN5-219ENST00000637537 FAM159AQ6UWV7 190 aa13.88□□□□□ -0.19
CLN5-219ENST00000637537 A0A1B0GWB2 263 aa13.88□□□□□ -0.19
CLN5-219ENST00000637537 DEFB131AP59861 70 aa13.88□□□□□ -0.19
CLN5-219ENST00000637537 RNASE1P07998 156 aaKnown RBP13.87□□□□□ -0.19
CLN5-219ENST00000637537 C14orf178Q8N769 122 aaPredicted RBP13.87□□□□□ -0.19
CLN5-219ENST00000637537 MRPL16Q9NX20 251 aaKnown RBP13.87□□□□□ -0.19
CLN5-219ENST00000637537 CD7P09564 240 aa13.87□□□□□ -0.19
CLN5-219ENST00000637537 DYNLRB2Q8TF09 96 aa13.86□□□□□ -0.19
CLN5-219ENST00000637537 GEMIN7Q9H840 131 aaKnown RBP13.86□□□□□ -0.19
CLN5-219ENST00000637537 TMEM158Q8WZ71 300 aa13.86□□□□□ -0.19
CLN5-219ENST00000637537 TRBV7-3A0A075B6L6 115 aa13.85□□□□□ -0.19
CLN5-219ENST00000637537 MTURNQ8N3F0 131 aa13.85□□□□□ -0.19
CLN5-219ENST00000637537 C20orf78Q9BR46 151 aa13.85□□□□□ -0.19
CLN5-219ENST00000637537 CDIP1Q9H305 208 aa13.85□□□□□ -0.19
CLN5-219ENST00000637537 TMEM160Q9NX00 188 aa13.85□□□□□ -0.19
CLN5-219ENST00000637537 ATP6V0E2Q8NHE4 81 aa13.84□□□□□ -0.19
CLN5-219ENST00000637537 JMJD1CQ15652 2540 aa13.84□□□□□ -0.19
CLN5-219ENST00000637537 IGLV2-18A0A075B6J9 118 aa13.84□□□□□ -0.19
CLN5-219ENST00000637537 CCL24O00175 119 aa13.84□□□□□ -0.19
CLN5-219ENST00000637537 LY6G6DO95868 133 aa13.84□□□□□ -0.19
CLN5-219ENST00000637537 FOXI1Q12951 378 aa13.84□□□□□ -0.19
CLN5-219ENST00000637537 DEFB114Q30KQ6 69 aa13.84□□□□□ -0.19
CLN5-219ENST00000637537 ZNF418Q8TF45 676 aaPredicted RBP13.84□□□□□ -0.19
CLN5-219ENST00000637537 MRPL35Q9NZE8 188 aaKnown RBP13.84□□□□□ -0.19
CLN5-219ENST00000637537 APOMO95445 188 aa13.83□□□□□ -0.2
CLN5-219ENST00000637537 Q8N8P6 123 aa13.83□□□□□ -0.2
CLN5-219ENST00000637537 NRACQ8N912 160 aa13.83□□□□□ -0.2
CLN5-219ENST00000637537 HIST1H4GQ99525 98 aa13.83□□□□□ -0.2
CLN5-219ENST00000637537 JPT2Q9H910 190 aa13.83□□□□□ -0.2
CLN5-219ENST00000637537 MDFICQ9P1T7 246 aa13.83□□□□□ -0.2
CLN5-219ENST00000637537 HILS1P60008 231 aa13.83□□□□□ -0.2
CLN5-219ENST00000637537 ODF3Q96PU9 254 aa13.82□□□□□ -0.2
CLN5-219ENST00000637537 C1QTNF4Q9BXJ3 329 aa13.82□□□□□ -0.2
CLN5-219ENST00000637537 HIVEP1P15822 2718 aa13.82□□□□□ -0.2
CLN5-219ENST00000637537 MGPP08493 103 aa13.82□□□□□ -0.2
CLN5-219ENST00000637537 Q8N1Y9 231 aa13.82□□□□□ -0.2
CLN5-219ENST00000637537 CYSLTR1Q9Y271 337 aa13.82□□□□□ -0.2
CLN5-219ENST00000637537 NSD1Q96L73 2696 aaPredicted RBP13.81□□□□□ -0.2
CLN5-219ENST00000637537 MORN3Q6PF18 240 aaPredicted RBP13.81□□□□□ -0.2
CLN5-219ENST00000637537 DUSP14O95147 198 aaKnown RBP13.81□□□□□ -0.2
CLN5-219ENST00000637537 RBMY1A1P0DJD3 496 aaKnown RBP13.81□□□□□ -0.2
CLN5-219ENST00000637537 RBMY1CP0DJD4 496 aa13.81□□□□□ -0.2
CLN5-219ENST00000637537 HTN1P15515 57 aa13.81□□□□□ -0.2
CLN5-219ENST00000637537 FHL3Q13643 280 aa13.81□□□□□ -0.2
CLN5-219ENST00000637537 RBMY1FQ15415 496 aaKnown RBP13.81□□□□□ -0.2
CLN5-219ENST00000637537 SYT8Q8NBV8 401 aa13.81□□□□□ -0.2
CLN5-219ENST00000637537 A0A087WX48 190 aa13.8□□□□□ -0.2
CLN5-219ENST00000637537 PRM2P04554 102 aa13.8□□□□□ -0.2
CLN5-219ENST00000637537 SMCPP49901 116 aaPredicted RBP13.8□□□□□ -0.2
CLN5-219ENST00000637537 CFAP126Q5VTH2 177 aa13.8□□□□□ -0.2
CLN5-219ENST00000637537 NOTCH3Q9UM47 2321 aa13.8□□□□□ -0.2
CLN5-219ENST00000637537 FN1P02751 2386 aaKnown RBP13.8□□□□□ -0.2
CLN5-219ENST00000637537 RBMY1BA6NDE4 496 aaKnown RBP13.8□□□□□ -0.2
CLN5-219ENST00000637537 RBMY1EA6NEQ0 496 aaKnown RBP13.8□□□□□ -0.2
CLN5-219ENST00000637537 RBMY1DP0C7P1 496 aaKnown RBP13.8□□□□□ -0.2
CLN5-219ENST00000637537 RPL39LQ96EH5 51 aaKnown RBP13.8□□□□□ -0.2
CLN5-219ENST00000637537 DPH3P1Q9H4G8 78 aa13.8□□□□□ -0.2
CLN5-219ENST00000637537 C16orf95Q9H693 158 aa13.8□□□□□ -0.2
CLN5-219ENST00000637537 MAP6D1Q9H9H5 199 aa13.8□□□□□ -0.2
CLN5-219ENST00000637537 H3BMM0 161 aa13.79□□□□□ -0.2
CLN5-219ENST00000637537 MED14OSP0DP75 135 aa13.79□□□□□ -0.2
CLN5-219ENST00000637537 SPINK8P0C7L1 97 aa13.79□□□□□ -0.2
CLN5-219ENST00000637537 A0A087WWL8 130 aa13.78□□□□□ -0.2
CLN5-219ENST00000637537 IGHV3-16A0A0C4DH30 117 aa13.78□□□□□ -0.2
CLN5-219ENST00000637537 TSPAN13O95857 204 aa13.78□□□□□ -0.2
CLN5-219ENST00000637537 ZNF256Q9Y2P7 627 aaPredicted RBP13.78□□□□□ -0.2
CLN5-219ENST00000637537 IGHV1OR15-1A0A075B7D0 117 aa13.78□□□□□ -0.2
CLN5-219ENST00000637537 RASL10AQ92737 203 aa13.78□□□□□ -0.2
CLN5-219ENST00000637537 PLNP26678 52 aa13.77□□□□□ -0.21
CLN5-219ENST00000637537 NFE4Q86UQ8 179 aa13.77□□□□□ -0.21
CLN5-219ENST00000637537 C2CD3Q4AC94 2353 aa13.77□□□□□ -0.21
CLN5-219ENST00000637537 MT-ATP8P03928 68 aa13.77□□□□□ -0.21
CLN5-219ENST00000637537 INAFM1C9JVW0 142 aa13.76□□□□□ -0.21
CLN5-219ENST00000637537 NSUN5P1Q3KNT7 163 aa13.76□□□□□ -0.21
CLN5-219ENST00000637537 MYMXA0A1B0GTQ4 84 aa13.75□□□□□ -0.21
CLN5-219ENST00000637537 LAGE3Q14657 143 aa13.75□□□□□ -0.21
CLN5-219ENST00000637537 Q6ZUT4 128 aa13.75□□□□□ -0.21
CLN5-219ENST00000637537 NXPH4O95158 308 aa13.75□□□□□ -0.21
CLN5-219ENST00000637537 FAM74A4Q5TZK3 123 aa13.75□□□□□ -0.21
CLN5-219ENST00000637537 DEFB104AQ8WTQ1 72 aa13.75□□□□□ -0.21
CLN5-219ENST00000637537 LINC00315P59091 139 aa13.74□□□□□ -0.21
CLN5-219ENST00000637537 PGPEP1Q9NXJ5 209 aa13.74□□□□□ -0.21
CLN5-219ENST00000637537 KIF25-AS1Q9Y6Z4 181 aa13.74□□□□□ -0.21
CLN5-219ENST00000637537 XGP55808 180 aa13.74□□□□□ -0.21
CLN5-219ENST00000637537 ODF3L2Q3SX64 289 aa13.74□□□□□ -0.21
CLN5-219ENST00000637537 C9orf85Q96MD7 179 aa13.74□□□□□ -0.21
CLN5-219ENST00000637537 FLNBO75369 2602 aaKnown RBP13.74□□□□□ -0.21
CLN5-219ENST00000637537 TRAV2A0A0B4J234 112 aa13.73□□□□□ -0.21
CLN5-219ENST00000637537 TRAV12-1A0A0B4J245 112 aa13.73□□□□□ -0.21
CLN5-219ENST00000637537 OR11H12B2RN74 326 aa13.73□□□□□ -0.21
CLN5-219ENST00000637537 PROK1P58294 105 aa13.73□□□□□ -0.21
CLN5-219ENST00000637537 OR11H2Q8NH07 326 aa13.73□□□□□ -0.21
CLN5-219ENST00000637537 ERG28Q9UKR5 140 aa13.73□□□□□ -0.21
CLN5-219ENST00000637537 VWFP04275 2813 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms