RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 DEFB114Q30KQ6 69 aa8.93□□□□□ -0.98
CLN8-212ENST00000637083 NEGR1Q7Z3B1 354 aa8.93□□□□□ -0.98
CLN8-212ENST00000637083 CEND1Q8N111 149 aa8.93□□□□□ -0.98
CLN8-212ENST00000637083 CLUHP3Q96NS8 147 aa8.93□□□□□ -0.98
CLN8-212ENST00000637083 DUX3Q96PT4 197 aa8.93□□□□□ -0.98
CLN8-212ENST00000637083 MAP6D1Q9H9H5 199 aa8.93□□□□□ -0.98
CLN8-212ENST00000637083 DNAJC9-AS1A6NH13 148 aa8.93□□□□□ -0.98
CLN8-212ENST00000637083 K7EP13 123 aa8.93□□□□□ -0.98
CLN8-212ENST00000637083 TTTY13Q9BZ97 58 aa8.93□□□□□ -0.98
CLN8-212ENST00000637083 M0R2P5 195 aa8.92□□□□□ -0.98
CLN8-212ENST00000637083 H3BUT2 72 aa8.92□□□□□ -0.98
CLN8-212ENST00000637083 MAPKAPK5-AS1Q8N8E1 139 aa8.92□□□□□ -0.98
CLN8-212ENST00000637083 SPXQ9BT56 116 aa8.92□□□□□ -0.98
CLN8-212ENST00000637083 INSP01308 110 aa8.91□□□□□ -0.98
CLN8-212ENST00000637083 HIST1H4GQ99525 98 aa8.91□□□□□ -0.98
CLN8-212ENST00000637083 CST9LQ9H4G1 147 aa8.91□□□□□ -0.98
CLN8-212ENST00000637083 TSHBP01222 138 aa8.9□□□□□ -0.98
CLN8-212ENST00000637083 HTN1P15515 57 aa8.9□□□□□ -0.98
CLN8-212ENST00000637083 CMC4P56277 68 aaPredicted RBP8.9□□□□□ -0.98
CLN8-212ENST00000637083 MORN3Q6PF18 240 aaPredicted RBP8.9□□□□□ -0.98
CLN8-212ENST00000637083 PRADC1Q9BSG0 188 aa8.9□□□□□ -0.98
CLN8-212ENST00000637083 SORL1Q92673 2214 aa8.9□□□□□ -0.98
CLN8-212ENST00000637083 C11orf86A6NJI1 115 aa8.9□□□□□ -0.99
CLN8-212ENST00000637083 RHODO00212 210 aa8.9□□□□□ -0.99
CLN8-212ENST00000637083 RBMY1A1P0DJD3 496 aaKnown RBP8.9□□□□□ -0.99
CLN8-212ENST00000637083 RBMY1CP0DJD4 496 aa8.9□□□□□ -0.99
CLN8-212ENST00000637083 FABP2P12104 132 aa8.9□□□□□ -0.99
CLN8-212ENST00000637083 FXYD2P54710 66 aa8.9□□□□□ -0.99
CLN8-212ENST00000637083 RBMY1FQ15415 496 aaKnown RBP8.9□□□□□ -0.99
CLN8-212ENST00000637083 CD300EQ496F6 205 aaPredicted RBP8.9□□□□□ -0.99
CLN8-212ENST00000637083 OR5A1Q8NGJ0 315 aa8.9□□□□□ -0.99
CLN8-212ENST00000637083 RAB37Q96AX2 223 aa8.9□□□□□ -0.99
CLN8-212ENST00000637083 LINC01587Q99440 93 aa8.9□□□□□ -0.99
CLN8-212ENST00000637083 K7EP34 96 aa8.89□□□□□ -0.99
CLN8-212ENST00000637083 RPL39P62891 51 aaKnown RBP8.89□□□□□ -0.99
CLN8-212ENST00000637083 FHL3Q13643 280 aa8.89□□□□□ -0.99
CLN8-212ENST00000637083 C20orf203Q8NBC4 194 aa8.89□□□□□ -0.99
CLN8-212ENST00000637083 IGLV4-69A0A075B6H9 119 aa8.88□□□□□ -0.99
CLN8-212ENST00000637083 A0A1W2PPM0 123 aa8.88□□□□□ -0.99
CLN8-212ENST00000637083 RBMY1BA6NDE4 496 aaKnown RBP8.88□□□□□ -0.99
CLN8-212ENST00000637083 RBMY1EA6NEQ0 496 aaKnown RBP8.88□□□□□ -0.99
CLN8-212ENST00000637083 RBMY1DP0C7P1 496 aaKnown RBP8.88□□□□□ -0.99
CLN8-212ENST00000637083 FLNAP21333 2647 aaKnown RBP8.88□□□□□ -0.99
CLN8-212ENST00000637083 SAMD5Q5TGI4 173 aa8.88□□□□□ -0.99
CLN8-212ENST00000637083 TNFRSF18Q9Y5U5 241 aa8.88□□□□□ -0.99
CLN8-212ENST00000637083 NF1P21359 2839 aa8.88□□□□□ -0.99
CLN8-212ENST00000637083 ANK3Q12955 4377 aaKnown RBP8.88□□□□□ -0.99
CLN8-212ENST00000637083 ITPR2Q14571 2701 aa8.88□□□□□ -0.99
CLN8-212ENST00000637083 ZNF815PA8K554 130 aa8.88□□□□□ -0.99
CLN8-212ENST00000637083 CCL24O00175 119 aa8.88□□□□□ -0.99
CLN8-212ENST00000637083 SCGB1D4Q6XE38 83 aa8.88□□□□□ -0.99
CLN8-212ENST00000637083 STHQ8IWL8 128 aa8.88□□□□□ -0.99
CLN8-212ENST00000637083 DNAJC30Q96LL9 226 aa8.88□□□□□ -0.99
CLN8-212ENST00000637083 C16orf95Q9H693 158 aa8.88□□□□□ -0.99
CLN8-212ENST00000637083 NHP2Q9NX24 153 aaKnown RBP8.88□□□□□ -0.99
CLN8-212ENST00000637083 CBY1Q9Y3M2 126 aa8.88□□□□□ -0.99
CLN8-212ENST00000637083 TSSC4Q9Y5U2 329 aaPredicted RBP8.88□□□□□ -0.99
CLN8-212ENST00000637083 PDZD2O15018 2839 aa8.88□□□□□ -0.99
CLN8-212ENST00000637083 TMEM238LA0A1B0GVL6 79 aa8.87□□□□□ -0.99
CLN8-212ENST00000637083 GAGE12BA1L429 117 aa8.87□□□□□ -0.99
CLN8-212ENST00000637083 A6NJY4 79 aa8.87□□□□□ -0.99
CLN8-212ENST00000637083 CRYBA4P53673 196 aa8.87□□□□□ -0.99
CLN8-212ENST00000637083 NFE4Q86UQ8 179 aa8.87□□□□□ -0.99
CLN8-212ENST00000637083 YAE1D1Q9NRH1 226 aa8.87□□□□□ -0.99
CLN8-212ENST00000637083 CUBNO60494 3623 aa8.87□□□□□ -0.99
CLN8-212ENST00000637083 HECTD1Q9ULT8 2610 aa8.87□□□□□ -0.99
CLN8-212ENST00000637083 ACANP16112 2415 aa8.87□□□□□ -0.99
CLN8-212ENST00000637083 RNASE1P07998 156 aaKnown RBP8.87□□□□□ -0.99
CLN8-212ENST00000637083 UFSP1Q6NVU6 142 aa8.87□□□□□ -0.99
CLN8-212ENST00000637083 PYGO1Q9Y3Y4 419 aa8.87□□□□□ -0.99
CLN8-212ENST00000637083 SPCS1Q9Y6A9 102 aa8.87□□□□□ -0.99
CLN8-212ENST00000637083 TRBV7-3A0A075B6L6 115 aa8.86□□□□□ -0.99
CLN8-212ENST00000637083 TMEM170BQ5T4T1 132 aa8.86□□□□□ -0.99
CLN8-212ENST00000637083 HIST2H2BDQ6DRA6 164 aa8.86□□□□□ -0.99
CLN8-212ENST00000637083 VCX2Q9H322 139 aa8.86□□□□□ -0.99
CLN8-212ENST00000637083 MAST4O15021 2626 aa8.86□□□□□ -0.99
CLN8-212ENST00000637083 P0DMU3 169 aa8.85□□□□□ -0.99
CLN8-212ENST00000637083 FAM231AP0DMU4 169 aa8.85□□□□□ -0.99
CLN8-212ENST00000637083 FAM231CP0DMU5 169 aa8.85□□□□□ -0.99
CLN8-212ENST00000637083 BEAN1Q3B7T3 259 aa8.85□□□□□ -0.99
CLN8-212ENST00000637083 CD28P10747 220 aa8.85□□□□□ -0.99
CLN8-212ENST00000637083 C12orf74Q32Q52 190 aa8.85□□□□□ -0.99
CLN8-212ENST00000637083 CFAP126Q5VTH2 177 aa8.85□□□□□ -0.99
CLN8-212ENST00000637083 ZNF418Q8TF45 676 aaPredicted RBP8.85□□□□□ -0.99
CLN8-212ENST00000637083 PHLDA1Q8WV24 401 aaPredicted RBP8.85□□□□□ -0.99
CLN8-212ENST00000637083 ESM1Q9NQ30 184 aa8.85□□□□□ -0.99
CLN8-212ENST00000637083 KRTAP1-1Q07627 177 aa8.84□□□□□ -0.99
CLN8-212ENST00000637083 SRSF9Q13242 221 aaKnown RBP eCLIP8.84□□□□□ -0.99
CLN8-212ENST00000637083 ODF3L2Q3SX64 289 aa8.84□□□□□ -0.99
CLN8-212ENST00000637083 C11orf72Q8NBR9 251 aa8.84□□□□□ -0.99
CLN8-212ENST00000637083 IGHV3-73A0A0B4J1V6 119 aa8.83□□□□□ -1
CLN8-212ENST00000637083 A0A1B0GWB2 263 aa8.83□□□□□ -1
CLN8-212ENST00000637083 A0A1W2PRX2 142 aa8.83□□□□□ -1
CLN8-212ENST00000637083 RS1O15537 224 aa8.83□□□□□ -1
CLN8-212ENST00000637083 IGHV3-53P01767 116 aa8.83□□□□□ -1
CLN8-212ENST00000637083 LGALS3P17931 250 aaKnown RBP8.83□□□□□ -1
CLN8-212ENST00000637083 DEFB104AQ8WTQ1 72 aa8.83□□□□□ -1
CLN8-212ENST00000637083 AGRNO00468 2067 aa8.83□□□□□ -1
CLN8-212ENST00000637083 K7ERU9 68 aa8.83□□□□□ -1
CLN8-212ENST00000637083 ZNRF2Q8NHG8 242 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms