RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 NHP2Q9NX24 153 aaKnown RBP13.87□□□□□ -0.19
CLN5-216ENST00000636780 TRBV7-9A0A0J9YWB2 115 aa13.87□□□□□ -0.19
CLN5-216ENST00000636780 MED14OSP0DP75 135 aa13.87□□□□□ -0.19
CLN5-216ENST00000636780 M0QY20 66 aa13.86□□□□□ -0.19
CLN5-216ENST00000636780 VWFP04275 2813 aa13.86□□□□□ -0.19
CLN5-216ENST00000636780 TMEM89A2RUT3 159 aa13.86□□□□□ -0.19
CLN5-216ENST00000636780 DNAJC9-AS1A6NH13 148 aa13.86□□□□□ -0.19
CLN5-216ENST00000636780 CEMP1Q6PRD7 247 aaPredicted RBP13.86□□□□□ -0.19
CLN5-216ENST00000636780 Q6ZSN1 163 aa13.86□□□□□ -0.19
CLN5-216ENST00000636780 H3BMM0 161 aa13.85□□□□□ -0.19
CLN5-216ENST00000636780 HLA-DRB4P13762 266 aa13.85□□□□□ -0.19
CLN5-216ENST00000636780 RNASE13Q5GAN3 156 aaKnown RBP13.85□□□□□ -0.19
CLN5-216ENST00000636780 FOXI2Q6ZQN5 318 aa13.85□□□□□ -0.19
CLN5-216ENST00000636780 HLA-DRB4X5D2U9 266 aa13.85□□□□□ -0.19
CLN5-216ENST00000636780 FN1P02751 2386 aaKnown RBP13.85□□□□□ -0.19
CLN5-216ENST00000636780 C11orf86A6NJI1 115 aa13.85□□□□□ -0.19
CLN5-216ENST00000636780 CD28P10747 220 aa13.85□□□□□ -0.19
CLN5-216ENST00000636780 SEC11AP67812 179 aa13.85□□□□□ -0.19
CLN5-216ENST00000636780 SMR3AQ99954 134 aa13.85□□□□□ -0.19
CLN5-216ENST00000636780 IGHV3-64A0A075B6Q5 118 aa13.84□□□□□ -0.19
CLN5-216ENST00000636780 DYNLRB2Q8TF09 96 aa13.84□□□□□ -0.19
CLN5-216ENST00000636780 CYSLTR1Q9Y271 337 aa13.84□□□□□ -0.19
CLN5-216ENST00000636780 OTOGQ6ZRI0 2925 aa13.84□□□□□ -0.19
CLN5-216ENST00000636780 PLEKHB2Q96CS7 222 aa13.84□□□□□ -0.19
CLN5-216ENST00000636780 XCL2Q9UBD3 114 aa13.84□□□□□ -0.19
CLN5-216ENST00000636780 PRADC1Q9BSG0 188 aa13.83□□□□□ -0.2
CLN5-216ENST00000636780 IGIPA6NJ69 53 aa13.83□□□□□ -0.2
CLN5-216ENST00000636780 POM121L12Q8N7R1 296 aa13.83□□□□□ -0.2
CLN5-216ENST00000636780 RNF152Q8N8N0 203 aa13.83□□□□□ -0.2
CLN5-216ENST00000636780 RAX2Q96IS3 184 aa13.83□□□□□ -0.2
CLN5-216ENST00000636780 KIR2DL4Q99706 377 aa13.83□□□□□ -0.2
CLN5-216ENST00000636780 A6NDN8 102 aa13.82□□□□□ -0.2
CLN5-216ENST00000636780 PLNP26678 52 aa13.82□□□□□ -0.2
CLN5-216ENST00000636780 MAP6D1Q9H9H5 199 aa13.82□□□□□ -0.2
CLN5-216ENST00000636780 GAGE10A6NGK3 116 aa13.82□□□□□ -0.2
CLN5-216ENST00000636780 C9orf118A6NHY6 69 aa13.82□□□□□ -0.2
CLN5-216ENST00000636780 VCYO14598 125 aa13.82□□□□□ -0.2
CLN5-216ENST00000636780 SIVA1O15304 175 aa13.82□□□□□ -0.2
CLN5-216ENST00000636780 SAP30O75446 220 aa13.82□□□□□ -0.2
CLN5-216ENST00000636780 SPAG8Q99932 426 aaPredicted RBP13.82□□□□□ -0.2
CLN5-216ENST00000636780 IGLV4-69A0A075B6H9 119 aa13.81□□□□□ -0.2
CLN5-216ENST00000636780 AZU1P20160 251 aa13.81□□□□□ -0.2
CLN5-216ENST00000636780 SFTA2Q6UW10 78 aa13.81□□□□□ -0.2
CLN5-216ENST00000636780 IGHV3-38A0A0C4DH36 116 aa13.81□□□□□ -0.2
CLN5-216ENST00000636780 H3BRM9 83 aa13.81□□□□□ -0.2
CLN5-216ENST00000636780 DEFB114Q30KQ6 69 aa13.81□□□□□ -0.2
CLN5-216ENST00000636780 ZNRF2Q8NHG8 242 aa13.81□□□□□ -0.2
CLN5-216ENST00000636780 HIST1H4GQ99525 98 aa13.81□□□□□ -0.2
CLN5-216ENST00000636780 MRPL16Q9NX20 251 aaKnown RBP13.81□□□□□ -0.2
CLN5-216ENST00000636780 GAGE12BA1L429 117 aa13.8□□□□□ -0.2
CLN5-216ENST00000636780 WFDC10AQ9H1F0 79 aa13.8□□□□□ -0.2
CLN5-216ENST00000636780 TRAV12-1A0A0B4J245 112 aa13.8□□□□□ -0.2
CLN5-216ENST00000636780 OR11H12B2RN74 326 aa13.8□□□□□ -0.2
CLN5-216ENST00000636780 TMEM170BQ5T4T1 132 aa13.8□□□□□ -0.2
CLN5-216ENST00000636780 Q8N2B8 174 aa13.8□□□□□ -0.2
CLN5-216ENST00000636780 OR11H2Q8NH07 326 aa13.8□□□□□ -0.2
CLN5-216ENST00000636780 LINC01587Q99440 93 aa13.8□□□□□ -0.2
CLN5-216ENST00000636780 CITED2Q99967 270 aaPredicted RBP13.8□□□□□ -0.2
CLN5-216ENST00000636780 CEND1Q8N111 149 aa13.79□□□□□ -0.2
CLN5-216ENST00000636780 SYT8Q8NBV8 401 aa13.79□□□□□ -0.2
CLN5-216ENST00000636780 C4orf3Q8WVX3 66 aa13.79□□□□□ -0.2
CLN5-216ENST00000636780 TSPEAR-AS2P59090 65 aa13.78□□□□□ -0.2
CLN5-216ENST00000636780 MTURNQ8N3F0 131 aa13.78□□□□□ -0.2
CLN5-216ENST00000636780 YAE1D1Q9NRH1 226 aa13.78□□□□□ -0.2
CLN5-216ENST00000636780 LRRC75A-AS1Q8N1F1 130 aa13.78□□□□□ -0.2
CLN5-216ENST00000636780 TRBV27A0A0K0K1C4 114 aa13.77□□□□□ -0.2
CLN5-216ENST00000636780 K7ERU9 68 aa13.77□□□□□ -0.2
CLN5-216ENST00000636780 SMIM13P0DJ93 91 aa13.77□□□□□ -0.2
CLN5-216ENST00000636780 SAMD13Q5VXD3 122 aa13.77□□□□□ -0.2
CLN5-216ENST00000636780 ODF3Q96PU9 254 aa13.77□□□□□ -0.2
CLN5-216ENST00000636780 MYMXA0A1B0GTQ4 84 aa13.77□□□□□ -0.21
CLN5-216ENST00000636780 ZNF815PA8K554 130 aa13.77□□□□□ -0.21
CLN5-216ENST00000636780 PHLDA1Q8WV24 401 aaPredicted RBP13.77□□□□□ -0.21
CLN5-216ENST00000636780 ODF3L2Q3SX64 289 aa13.76□□□□□ -0.21
CLN5-216ENST00000636780 PLA2G2AP14555 144 aa13.76□□□□□ -0.21
CLN5-216ENST00000636780 PEMTQ9UBM1 199 aa13.76□□□□□ -0.21
CLN5-216ENST00000636780 HIVEP2P31629 2446 aa13.76□□□□□ -0.21
CLN5-216ENST00000636780 SCGB2A2Q13296 93 aa13.75□□□□□ -0.21
CLN5-216ENST00000636780 SAMD5Q5TGI4 173 aa13.75□□□□□ -0.21
CLN5-216ENST00000636780 A0A1W2PPM0 123 aa13.75□□□□□ -0.21
CLN5-216ENST00000636780 PPP1R17O96001 155 aa13.75□□□□□ -0.21
CLN5-216ENST00000636780 KRTAP1-1Q07627 177 aa13.75□□□□□ -0.21
CLN5-216ENST00000636780 PMVKQ15126 192 aa13.75□□□□□ -0.21
CLN5-216ENST00000636780 SCGB1D4Q6XE38 83 aa13.75□□□□□ -0.21
CLN5-216ENST00000636780 HIGD1BQ9P298 99 aa13.75□□□□□ -0.21
CLN5-216ENST00000636780 SPCS1Q9Y6A9 102 aa13.75□□□□□ -0.21
CLN5-216ENST00000636780 CCL24O00175 119 aa13.74□□□□□ -0.21
CLN5-216ENST00000636780 IGHV3-53P01767 116 aa13.74□□□□□ -0.21
CLN5-216ENST00000636780 CFAP161Q6P656 301 aa13.74□□□□□ -0.21
CLN5-216ENST00000636780 TENM1Q9UKZ4 2725 aa13.73□□□□□ -0.21
CLN5-216ENST00000636780 TRGV11A0A075B6L2 103 aa13.73□□□□□ -0.21
CLN5-216ENST00000636780 A0A0J9YXV3 536 aa13.73□□□□□ -0.21
CLN5-216ENST00000636780 TRPT1Q86TN4 253 aaKnown RBP13.73□□□□□ -0.21
CLN5-216ENST00000636780 ADARB2-AS1A8MUL3 147 aa13.72□□□□□ -0.21
CLN5-216ENST00000636780 E9PLD3 99 aa13.72□□□□□ -0.21
CLN5-216ENST00000636780 UFSP1Q6NVU6 142 aa13.72□□□□□ -0.21
CLN5-216ENST00000636780 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.71□□□□□ -0.21
CLN5-216ENST00000636780 IGKV2-29A2NJV5 120 aaPredicted RBP13.71□□□□□ -0.21
CLN5-216ENST00000636780 C12orf74Q32Q52 190 aa13.71□□□□□ -0.21
CLN5-216ENST00000636780 TM2D2Q9BX73 214 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms