RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 MGAM2Q2M2H8 2515 aa14.58□□□□□ -0.08
CLN8-208ENST00000635751 HLA-DRB4P13762 266 aa14.57□□□□□ -0.08
CLN8-208ENST00000635751 CDKN1BP46527 198 aa14.57□□□□□ -0.08
CLN8-208ENST00000635751 TMEM97Q5BJF2 176 aa14.57□□□□□ -0.08
CLN8-208ENST00000635751 HLA-DRB4X5D2U9 266 aa14.57□□□□□ -0.08
CLN8-208ENST00000635751 H3BMM0 161 aa14.57□□□□□ -0.08
CLN8-208ENST00000635751 TOMM6Q96B49 74 aa14.57□□□□□ -0.08
CLN8-208ENST00000635751 DNHD1Q96M86 4753 aa14.56□□□□□ -0.08
CLN8-208ENST00000635751 NOTCH1P46531 2555 aa14.56□□□□□ -0.08
CLN8-208ENST00000635751 A0A087WX48 190 aa14.56□□□□□ -0.08
CLN8-208ENST00000635751 TAX1BP3O14907 124 aa14.56□□□□□ -0.08
CLN8-208ENST00000635751 LINC00315P59091 139 aa14.56□□□□□ -0.08
CLN8-208ENST00000635751 PCP2Q8IVA1 136 aa14.56□□□□□ -0.08
CLN8-208ENST00000635751 Q8N1Y9 231 aa14.56□□□□□ -0.08
CLN8-208ENST00000635751 C9orf85Q96MD7 179 aa14.56□□□□□ -0.08
CLN8-208ENST00000635751 TRAV12-2A0A075B6T6 113 aa14.55□□□□□ -0.08
CLN8-208ENST00000635751 IGHV3-16A0A0C4DH30 117 aa14.55□□□□□ -0.08
CLN8-208ENST00000635751 SEC11AP67812 179 aa14.55□□□□□ -0.08
CLN8-208ENST00000635751 STHQ8IWL8 128 aa14.55□□□□□ -0.08
CLN8-208ENST00000635751 MRPL35Q9NZE8 188 aaKnown RBP14.55□□□□□ -0.08
CLN8-208ENST00000635751 TRAV12-1A0A0B4J245 112 aa14.55□□□□□ -0.08
CLN8-208ENST00000635751 RPL32P62910 135 aaKnown RBP14.55□□□□□ -0.08
CLN8-208ENST00000635751 HSD52Q0P140 79 aa14.55□□□□□ -0.08
CLN8-208ENST00000635751 DNAH3Q8TD57 4116 aa14.54□□□□□ -0.08
CLN8-208ENST00000635751 IGHV1OR15-1A0A075B7D0 117 aa14.54□□□□□ -0.08
CLN8-208ENST00000635751 PLNP26678 52 aa14.54□□□□□ -0.08
CLN8-208ENST00000635751 SPINK13Q1W4C9 94 aa14.54□□□□□ -0.08
CLN8-208ENST00000635751 SCGB3A1Q96QR1 104 aa14.54□□□□□ -0.08
CLN8-208ENST00000635751 CSTL1Q9H114 145 aa14.54□□□□□ -0.08
CLN8-208ENST00000635751 NBEAL1Q6ZS30 2694 aa14.54□□□□□ -0.08
CLN8-208ENST00000635751 SYT8Q8NBV8 401 aa14.53□□□□□ -0.08
CLN8-208ENST00000635751 RBMY1BA6NDE4 496 aaKnown RBP14.52□□□□□ -0.08
CLN8-208ENST00000635751 RBMY1EA6NEQ0 496 aaKnown RBP14.52□□□□□ -0.08
CLN8-208ENST00000635751 RBMY1DP0C7P1 496 aaKnown RBP14.52□□□□□ -0.08
CLN8-208ENST00000635751 UBE2V1Q13404 147 aa14.52□□□□□ -0.08
CLN8-208ENST00000635751 ZC2HC1BQ5TFG8 222 aa14.52□□□□□ -0.08
CLN8-208ENST00000635751 SUMO4Q6EEV6 95 aa14.52□□□□□ -0.08
CLN8-208ENST00000635751 JPT2Q9H910 190 aa14.52□□□□□ -0.08
CLN8-208ENST00000635751 IGKV2D-26A0A0A0MRZ7 120 aa14.52□□□□□ -0.09
CLN8-208ENST00000635751 H7C1H1 209 aa14.52□□□□□ -0.09
CLN8-208ENST00000635751 PTTG1IPP53801 180 aa14.52□□□□□ -0.09
CLN8-208ENST00000635751 AMTNQ6UX39 209 aa14.52□□□□□ -0.09
CLN8-208ENST00000635751 C2orf66Q6UXQ4 117 aa14.52□□□□□ -0.09
CLN8-208ENST00000635751 TRPT1Q86TN4 253 aaKnown RBP14.52□□□□□ -0.09
CLN8-208ENST00000635751 A8MTW9 85 aa14.51□□□□□ -0.09
CLN8-208ENST00000635751 MDFICQ9P1T7 246 aa14.51□□□□□ -0.09
CLN8-208ENST00000635751 A0A087WWL8 130 aa14.5□□□□□ -0.09
CLN8-208ENST00000635751 F8VRH5 84 aa14.5□□□□□ -0.09
CLN8-208ENST00000635751 A6NDN8 102 aa14.5□□□□□ -0.09
CLN8-208ENST00000635751 F5H697 171 aa14.5□□□□□ -0.09
CLN8-208ENST00000635751 RPL35AP18077 110 aaKnown RBP14.5□□□□□ -0.09
CLN8-208ENST00000635751 CBY3A6NI87 242 aa14.49□□□□□ -0.09
CLN8-208ENST00000635751 LINC01549A6NIU2 74 aa14.49□□□□□ -0.09
CLN8-208ENST00000635751 CCL25O15444 150 aa14.49□□□□□ -0.09
CLN8-208ENST00000635751 VAMP3Q15836 100 aa14.49□□□□□ -0.09
CLN8-208ENST00000635751 NEXN-AS1Q8NBZ9 246 aa14.49□□□□□ -0.09
CLN8-208ENST00000635751 CLUHP3Q96NS8 147 aa14.49□□□□□ -0.09
CLN8-208ENST00000635751 HIGD1BQ9P298 99 aa14.49□□□□□ -0.09
CLN8-208ENST00000635751 CHTOPQ9Y3Y2 248 aaKnown RBP14.49□□□□□ -0.09
CLN8-208ENST00000635751 TRGV11A0A075B6L2 103 aa14.48□□□□□ -0.09
CLN8-208ENST00000635751 ERASQ7Z444 233 aa14.48□□□□□ -0.09
CLN8-208ENST00000635751 POLR2KP53803 58 aaKnown RBP14.48□□□□□ -0.09
CLN8-208ENST00000635751 VCYO14598 125 aa14.47□□□□□ -0.09
CLN8-208ENST00000635751 BAALCQ8WXS3 180 aa14.47□□□□□ -0.09
CLN8-208ENST00000635751 CYSLTR1Q9Y271 337 aa14.47□□□□□ -0.09
CLN8-208ENST00000635751 TRBV6-5A0A0K0K1A5 114 aa14.46□□□□□ -0.09
CLN8-208ENST00000635751 PRB2P02812 416 aaPredicted RBP14.46□□□□□ -0.09
CLN8-208ENST00000635751 FAM74A4Q5TZK3 123 aa14.46□□□□□ -0.09
CLN8-208ENST00000635751 NEGR1Q7Z3B1 354 aa14.46□□□□□ -0.09
CLN8-208ENST00000635751 KPRPQ5T749 579 aaPredicted RBP14.45□□□□□ -0.1
CLN8-208ENST00000635751 KIR2DL4Q99706 377 aa14.45□□□□□ -0.1
CLN8-208ENST00000635751 IGHV4-30-4P0DP06 118 aa14.45□□□□□ -0.1
CLN8-208ENST00000635751 ZNF56Q15929 161 aa14.45□□□□□ -0.1
CLN8-208ENST00000635751 ZFP2Q6ZN57 461 aa14.45□□□□□ -0.1
CLN8-208ENST00000635751 TTTY13Q9BZ97 58 aa14.45□□□□□ -0.1
CLN8-208ENST00000635751 SDHAF1A6NFY7 115 aa14.44□□□□□ -0.1
CLN8-208ENST00000635751 CRYGDP07320 174 aa14.44□□□□□ -0.1
CLN8-208ENST00000635751 XCL2Q9UBD3 114 aa14.44□□□□□ -0.1
CLN8-208ENST00000635751 TRBV27A0A0K0K1C4 114 aa14.43□□□□□ -0.1
CLN8-208ENST00000635751 H3BRM9 83 aa14.43□□□□□ -0.1
CLN8-208ENST00000635751 CHAC1Q9BUX1 264 aa14.43□□□□□ -0.1
CLN8-208ENST00000635751 TRBV25-1A0A075B6N4 114 aa14.43□□□□□ -0.1
CLN8-208ENST00000635751 TP53TG1Q9Y2A0 90 aa14.43□□□□□ -0.1
CLN8-208ENST00000635751 M0QY20 66 aa14.42□□□□□ -0.1
CLN8-208ENST00000635751 GIG44P09565 113 aaPredicted RBP14.42□□□□□ -0.1
CLN8-208ENST00000635751 RBMY1A1P0DJD3 496 aaKnown RBP14.42□□□□□ -0.1
CLN8-208ENST00000635751 RBMY1CP0DJD4 496 aa14.42□□□□□ -0.1
CLN8-208ENST00000635751 RBMY1FQ15415 496 aaKnown RBP14.42□□□□□ -0.1
CLN8-208ENST00000635751 ZNF876PQ49A33 203 aa14.42□□□□□ -0.1
CLN8-208ENST00000635751 PRSS29PA6NIE9 313 aa14.41□□□□□ -0.1
CLN8-208ENST00000635751 MORN3Q6PF18 240 aaPredicted RBP14.41□□□□□ -0.1
CLN8-208ENST00000635751 OR4C5Q8NGB2 326 aa14.41□□□□□ -0.1
CLN8-208ENST00000635751 TRAV8-6A0A0B4J262 113 aa14.41□□□□□ -0.1
CLN8-208ENST00000635751 AMMECR1LQ6DCA0 310 aa14.41□□□□□ -0.1
CLN8-208ENST00000635751 TMEM141Q96I45 108 aa14.41□□□□□ -0.1
CLN8-208ENST00000635751 C9orf118A6NHY6 69 aa14.39□□□□□ -0.11
CLN8-208ENST00000635751 IGIPA6NJ69 53 aa14.39□□□□□ -0.11
CLN8-208ENST00000635751 MAPKAPK5-AS1Q8N8E1 139 aa14.39□□□□□ -0.11
CLN8-208ENST00000635751 TIMM17AQ99595 171 aa14.39□□□□□ -0.11
CLN8-208ENST00000635751 INSP01308 110 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms