RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 FAT4Q6V0I7 4981 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 SNRPGP15A8MWD9 76 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 FNDC10F2Z333 226 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 F5H768 121 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 H7BYZ3 331 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 K7EP13 123 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 SPINK4O60575 86 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 CFDP00746 253 aaPredicted RBP1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 LINC00694P0DN24 101 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 DEFB130BP0DP73 79 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 DEFB130AP0DP74 79 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 TCL1AP56279 114 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 VBP1P61758 197 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 HAMPP81172 84 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 MRPS10P82664 201 aaKnown RBP1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 RAB31Q13636 194 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 MOBPQ13875 183 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 OR10J3Q5JRS4 329 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 IBA57Q5T440 356 aaKnown RBP1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 PRR9Q5T870 116 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 EBLN2Q6P2I7 272 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 TMEM14EPQ6UXP3 125 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 Q6ZTI0 123 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 NEGR1Q7Z3B1 354 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 LYZL2Q7Z4W2 148 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 TMEM144Q7Z5S9 345 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 OR8I2Q8N0Y5 310 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 OR4B1Q8NGF8 309 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 GNPNAT1Q96EK6 184 aaPredicted RBP1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 LINC00052Q96N35 136 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 PDCD10Q9BUL8 212 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 PBDC1Q9BVG4 233 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 C11orf1Q9H5F2 150 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 ENY2Q9NPA8 101 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 NOP10Q9NPE3 64 aaKnown RBP1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 CYTL1Q9NRR1 136 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 ZNF586Q9NXT0 402 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 COPZ2Q9P299 210 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 COMMD3Q9UBI1 195 aa1.41□□□□□ -2.18
SMARCB1-208ENST00000634926 PGPA6NDG6 321 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 COLCA2A8K830 154 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 CEBPZOSA8MTT3 80 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 H3BP45 60 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 H3BQ15 152 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 SMLR1H3BR10 107 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 COX7A2P2O60397 106 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 FABP1P07148 127 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 SEC11BP0C7V7 166 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 AKAIN1P0CW23 69 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 IAPPP10997 89 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 RPL7P18124 248 aaKnown RBP1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 CRYBA4P53673 196 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 LSM3P62310 102 aaKnown RBP1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 HBG1P69891 147 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 HBG2P69892 147 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 HIST1H1AQ02539 215 aaPredicted RBP1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 PPP1R1AQ13522 171 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 OR2F1Q13607 317 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 WFDC2Q14508 124 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 SPCS2Q15005 226 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 TMEM128Q5BJH2 165 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 LINC01556Q5JQF7 62 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 FAM162BQ5T6X4 162 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 LCN15Q6UWW0 184 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 Q6ZQT7 251 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 CYP2G1PQ6ZSU1 146 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 WFDC10BQ8IUB3 73 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 MIR7-3HGQ8N6C7 128 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 ZFAND2AQ8N6M9 145 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 Q8N814 137 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 ZNF680Q8NEM1 530 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 DYNC2LI1Q8TCX1 351 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 ZNF431Q8TF32 576 aaPredicted RBP1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 DEDD2Q8WXF8 326 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 FMC1Q96HJ9 113 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 LINC00477Q96M19 166 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 YPEL4Q96NS1 127 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 MGST2Q99735 147 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 PRRT1Q99946 306 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 C7orf50Q9BRJ6 194 aaKnown RBP1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 SLC50A1Q9BRV3 221 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 PARD6GQ9BYG4 376 aaPredicted RBP1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 SRRQ9GZT4 340 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 RBM12B-AS1Q9P1G2 102 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 C14orf166Q9Y224 244 aaKnown RBP1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 V9GYH0 126 aa1.4□□□□□ -2.19
SMARCB1-208ENST00000634926 TRBV19A0A075B6N1 114 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 A0A087WXM4 84 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 TRAV8-3A0A0A6YYJ7 113 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 A0A0J9YY99 117 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 SMIM31A0A1B0GVY4 71 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 C7orf71A4D174 169 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 A8MUU9 505 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 DISC1C4P0D8 188 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 SYNGR2O43760 224 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 HYPMO75409 117 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 ADAP1O75689 374 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 SMR3BP02814 79 aaPredicted RBP1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 SLC25A5P05141 298 aaKnown RBP1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 NMBP08949 121 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms