RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 RPL39LQ96EH5 51 aaKnown RBP12.36□□□□□ -0.43
SPTAN1-217ENST00000629089 NIT2Q9NQR4 276 aa12.36□□□□□ -0.43
SPTAN1-217ENST00000629089 GAGE12JA6NER3 117 aa12.35□□□□□ -0.43
SPTAN1-217ENST00000629089 NUPR2A6NF83 97 aa12.35□□□□□ -0.43
SPTAN1-217ENST00000629089 IGLL5B9A064 214 aa12.35□□□□□ -0.43
SPTAN1-217ENST00000629089 RPL36AP83881 106 aaKnown RBP12.35□□□□□ -0.43
SPTAN1-217ENST00000629089 GAGE1Q13065 139 aa12.35□□□□□ -0.43
SPTAN1-217ENST00000629089 GAGE4Q13068 117 aa12.35□□□□□ -0.43
SPTAN1-217ENST00000629089 GAGE5Q13069 117 aa12.35□□□□□ -0.43
SPTAN1-217ENST00000629089 GAGE13Q4V321 117 aa12.35□□□□□ -0.43
SPTAN1-217ENST00000629089 NEXN-AS1Q8NBZ9 246 aa12.35□□□□□ -0.43
SPTAN1-217ENST00000629089 ZNRF2Q8NHG8 242 aa12.35□□□□□ -0.43
SPTAN1-217ENST00000629089 RPL36ALQ969Q0 106 aaKnown RBP12.35□□□□□ -0.43
SPTAN1-217ENST00000629089 PRELID3AQ96N28 172 aa12.35□□□□□ -0.43
SPTAN1-217ENST00000629089 Q9UF83 564 aa12.35□□□□□ -0.43
SPTAN1-217ENST00000629089 TNFRSF18Q9Y5U5 241 aa12.35□□□□□ -0.43
SPTAN1-217ENST00000629089 PPP1R17O96001 155 aa12.34□□□□□ -0.43
SPTAN1-217ENST00000629089 CEMP1Q6PRD7 247 aaPredicted RBP12.34□□□□□ -0.43
SPTAN1-217ENST00000629089 MUC7Q8TAX7 377 aa12.34□□□□□ -0.43
SPTAN1-217ENST00000629089 TRBV7-3A0A075B6L6 115 aa12.33□□□□□ -0.44
SPTAN1-217ENST00000629089 H3BNG1 76 aa12.33□□□□□ -0.44
SPTAN1-217ENST00000629089 TRGC2P03986 189 aa12.33□□□□□ -0.44
SPTAN1-217ENST00000629089 DNAJC30Q96LL9 226 aa12.33□□□□□ -0.44
SPTAN1-217ENST00000629089 ICOSQ9Y6W8 199 aa12.33□□□□□ -0.44
SPTAN1-217ENST00000629089 TNFRSF6BO95407 300 aa12.32□□□□□ -0.44
SPTAN1-217ENST00000629089 NUDT3O95989 172 aa12.32□□□□□ -0.44
SPTAN1-217ENST00000629089 ZFAND6Q6FIF0 208 aa12.32□□□□□ -0.44
SPTAN1-217ENST00000629089 NRACQ8N912 160 aa12.32□□□□□ -0.44
SPTAN1-217ENST00000629089 KLK5Q9Y337 293 aaPredicted RBP12.32□□□□□ -0.44
SPTAN1-217ENST00000629089 NPYP01303 97 aa12.32□□□□□ -0.44
SPTAN1-217ENST00000629089 SRIP30626 198 aa12.32□□□□□ -0.44
SPTAN1-217ENST00000629089 MRPL23Q16540 153 aaKnown RBP12.32□□□□□ -0.44
SPTAN1-217ENST00000629089 ST20Q9HBF5 79 aa12.32□□□□□ -0.44
SPTAN1-217ENST00000629089 A0A096LPF7 62 aa12.31□□□□□ -0.44
SPTAN1-217ENST00000629089 C15orf53Q8NAA6 179 aa12.31□□□□□ -0.44
SPTAN1-217ENST00000629089 LAMTOR2Q9Y2Q5 125 aa12.31□□□□□ -0.44
SPTAN1-217ENST00000629089 TGP01266 2768 aa12.3□□□□□ -0.44
SPTAN1-217ENST00000629089 TRBV6-5A0A0K0K1A5 114 aa12.3□□□□□ -0.44
SPTAN1-217ENST00000629089 PHOX2AO14813 284 aa12.3□□□□□ -0.44
SPTAN1-217ENST00000629089 SUMO2P61956 95 aaKnown RBP12.3□□□□□ -0.44
SPTAN1-217ENST00000629089 ALKBH7Q9BT30 221 aaPredicted RBP12.3□□□□□ -0.44
SPTAN1-217ENST00000629089 SDHAF1A6NFY7 115 aa12.29□□□□□ -0.44
SPTAN1-217ENST00000629089 UBE2D3P61077 147 aa12.29□□□□□ -0.44
SPTAN1-217ENST00000629089 UBE2D2P62837 147 aa12.29□□□□□ -0.44
SPTAN1-217ENST00000629089 ATP6V0E2Q8NHE4 81 aa12.28□□□□□ -0.44
SPTAN1-217ENST00000629089 C20orf78Q9BR46 151 aa12.28□□□□□ -0.44
SPTAN1-217ENST00000629089 MAP1LC3AQ9H492 121 aa12.28□□□□□ -0.44
SPTAN1-217ENST00000629089 IGHV3-38A0A0C4DH36 116 aa12.27□□□□□ -0.44
SPTAN1-217ENST00000629089 LOC389332A0A1B0GUA5 103 aa12.27□□□□□ -0.44
SPTAN1-217ENST00000629089 LINC00694P0DN24 101 aa12.27□□□□□ -0.44
SPTAN1-217ENST00000629089 NEGR1Q7Z3B1 354 aa12.27□□□□□ -0.44
SPTAN1-217ENST00000629089 SH2D6Q7Z4S9 175 aa12.27□□□□□ -0.44
SPTAN1-217ENST00000629089 DAZ4Q86SG3 579 aaKnown RBP12.27□□□□□ -0.45
SPTAN1-217ENST00000629089 TMEM70Q9BUB7 260 aa12.27□□□□□ -0.45
SPTAN1-217ENST00000629089 DAZ3Q9NR90 486 aaKnown RBP12.27□□□□□ -0.45
SPTAN1-217ENST00000629089 PMCHP20382 165 aa12.26□□□□□ -0.45
SPTAN1-217ENST00000629089 VCYO14598 125 aa12.25□□□□□ -0.45
SPTAN1-217ENST00000629089 POLR2KP53803 58 aaKnown RBP12.25□□□□□ -0.45
SPTAN1-217ENST00000629089 SMIM2Q9BVW6 85 aa12.25□□□□□ -0.45
SPTAN1-217ENST00000629089 I3L3M4 83 aa12.24□□□□□ -0.45
SPTAN1-217ENST00000629089 TCTAP57738 103 aa12.24□□□□□ -0.45
SPTAN1-217ENST00000629089 DEFB104AQ8WTQ1 72 aa12.24□□□□□ -0.45
SPTAN1-217ENST00000629089 GTSF1LQ9H1H1 148 aa12.24□□□□□ -0.45
SPTAN1-217ENST00000629089 APLNQ9ULZ1 77 aa12.24□□□□□ -0.45
SPTAN1-217ENST00000629089 TRBV27A0A0K0K1C4 114 aa12.23□□□□□ -0.45
SPTAN1-217ENST00000629089 C3orf84H3BNL1 204 aa12.23□□□□□ -0.45
SPTAN1-217ENST00000629089 RPL32P62910 135 aaKnown RBP12.23□□□□□ -0.45
SPTAN1-217ENST00000629089 IQCJQ1A5X6 159 aa12.23□□□□□ -0.45
SPTAN1-217ENST00000629089 C18orf32Q8TCD1 76 aa12.23□□□□□ -0.45
SPTAN1-217ENST00000629089 KIR2DL4Q99706 377 aa12.23□□□□□ -0.45
SPTAN1-217ENST00000629089 PRSS47A8MTI9 375 aa12.22□□□□□ -0.45
SPTAN1-217ENST00000629089 C1orf196B1AJZ1 125 aa12.22□□□□□ -0.45
SPTAN1-217ENST00000629089 COTL1Q14019 142 aa12.22□□□□□ -0.45
SPTAN1-217ENST00000629089 PRSS3P2Q8NHM4 247 aa12.22□□□□□ -0.45
SPTAN1-217ENST00000629089 IFI27P40305 119 aaPredicted RBP12.21□□□□□ -0.45
SPTAN1-217ENST00000629089 LYPD5Q6UWN5 251 aa12.21□□□□□ -0.45
SPTAN1-217ENST00000629089 NXT2Q9NPJ8 142 aaKnown RBP12.21□□□□□ -0.45
SPTAN1-217ENST00000629089 DNAH7Q8WXX0 4024 aa12.21□□□□□ -0.45
SPTAN1-217ENST00000629089 FCER1GP30273 86 aa12.21□□□□□ -0.46
SPTAN1-217ENST00000629089 TMEM97Q5BJF2 176 aa12.21□□□□□ -0.46
SPTAN1-217ENST00000629089 CASC10Q5T4H9 136 aa12.21□□□□□ -0.46
SPTAN1-217ENST00000629089 Q8N8P6 123 aa12.21□□□□□ -0.46
SPTAN1-217ENST00000629089 ESRGQ1W209 222 aa12.2□□□□□ -0.46
SPTAN1-217ENST00000629089 IGLV2-18A0A075B6J9 118 aa12.19□□□□□ -0.46
SPTAN1-217ENST00000629089 TCAPO15273 167 aa12.19□□□□□ -0.46
SPTAN1-217ENST00000629089 CCL18P55774 89 aa12.19□□□□□ -0.46
SPTAN1-217ENST00000629089 FA2HQ7L5A8 372 aa12.19□□□□□ -0.46
SPTAN1-217ENST00000629089 HIST1H2BKO60814 126 aa12.18□□□□□ -0.46
SPTAN1-217ENST00000629089 TSHBP01222 138 aa12.18□□□□□ -0.46
SPTAN1-217ENST00000629089 HIST1H2BJP06899 126 aa12.18□□□□□ -0.46
SPTAN1-217ENST00000629089 HIST1H2BOP23527 126 aa12.18□□□□□ -0.46
SPTAN1-217ENST00000629089 HIST1H2BBP33778 126 aa12.18□□□□□ -0.46
SPTAN1-217ENST00000629089 HIST1H2BDP58876 126 aa12.18□□□□□ -0.46
SPTAN1-217ENST00000629089 HIST1H2BCP62807 126 aa12.18□□□□□ -0.46
SPTAN1-217ENST00000629089 HIST2H2BEQ16778 126 aa12.18□□□□□ -0.46
SPTAN1-217ENST00000629089 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.18□□□□□ -0.46
SPTAN1-217ENST00000629089 NTM-AS1Q6ZSK4 140 aa12.18□□□□□ -0.46
SPTAN1-217ENST00000629089 BAGE3Q86Y29 109 aa12.18□□□□□ -0.46
SPTAN1-217ENST00000629089 HIST1H2BHQ93079 126 aa12.18□□□□□ -0.46
SPTAN1-217ENST00000629089 HIST1H2BNQ99877 126 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 207.8 ms