RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 ITPR3Q14573 2671 aa8.8□□□□□ -1
TP53-227ENST00000622645 IGLV4-69A0A075B6H9 119 aa8.8□□□□□ -1
TP53-227ENST00000622645 C11orf86A6NJI1 115 aa8.8□□□□□ -1
TP53-227ENST00000622645 E9PLD3 99 aa8.8□□□□□ -1
TP53-227ENST00000622645 H3BMM0 161 aa8.8□□□□□ -1
TP53-227ENST00000622645 FABP2P12104 132 aa8.8□□□□□ -1
TP53-227ENST00000622645 WFDC11Q8NEX6 87 aa8.8□□□□□ -1
TP53-227ENST00000622645 IGHV3-73A0A0B4J1V6 119 aa8.79□□□□□ -1
TP53-227ENST00000622645 PMVKQ15126 192 aa8.79□□□□□ -1
TP53-227ENST00000622645 KLHL30-AS1Q8NEE0 82 aa8.79□□□□□ -1
TP53-227ENST00000622645 PHLDA1Q8WV24 401 aaPredicted RBP8.79□□□□□ -1
TP53-227ENST00000622645 OPRPNQ99935 248 aaPredicted RBP8.79□□□□□ -1
TP53-227ENST00000622645 TRGV11A0A075B6L2 103 aa8.79□□□□□ -1
TP53-227ENST00000622645 RIPPLY3P57055 190 aa8.79□□□□□ -1
TP53-227ENST00000622645 HIST2H2BCQ6DN03 193 aa8.79□□□□□ -1
TP53-227ENST00000622645 C11orf44Q8N8P7 122 aa8.79□□□□□ -1
TP53-227ENST00000622645 C4orf3Q8WVX3 66 aa8.79□□□□□ -1
TP53-227ENST00000622645 PEMTQ9UBM1 199 aa8.79□□□□□ -1
TP53-227ENST00000622645 PROK1P58294 105 aa8.78□□□□□ -1
TP53-227ENST00000622645 TRPT1Q86TN4 253 aaKnown RBP8.78□□□□□ -1
TP53-227ENST00000622645 P0DMU3 169 aa8.78□□□□□ -1
TP53-227ENST00000622645 FAM231AP0DMU4 169 aa8.78□□□□□ -1
TP53-227ENST00000622645 FAM231CP0DMU5 169 aa8.78□□□□□ -1
TP53-227ENST00000622645 OR5A1Q8NGJ0 315 aa8.78□□□□□ -1
TP53-227ENST00000622645 TIMM17AQ99595 171 aa8.78□□□□□ -1
TP53-227ENST00000622645 NF1P21359 2839 aa8.78□□□□□ -1
TP53-227ENST00000622645 TRBV7-3A0A075B6L6 115 aa8.77□□□□□ -1
TP53-227ENST00000622645 Q6ZSV7 163 aa8.77□□□□□ -1
TP53-227ENST00000622645 TMEM141Q96I45 108 aa8.77□□□□□ -1
TP53-227ENST00000622645 ZNF815PA8K554 130 aa8.77□□□□□ -1.01
TP53-227ENST00000622645 SCGB2A2Q13296 93 aa8.77□□□□□ -1.01
TP53-227ENST00000622645 TAL2Q16559 108 aa8.77□□□□□ -1.01
TP53-227ENST00000622645 DYNLRB2Q8TF09 96 aa8.77□□□□□ -1.01
TP53-227ENST00000622645 CHD6Q8TD26 2715 aa8.77□□□□□ -1.01
TP53-227ENST00000622645 LINC01549A6NIU2 74 aa8.77□□□□□ -1.01
TP53-227ENST00000622645 ZNRF2Q8NHG8 242 aa8.77□□□□□ -1.01
TP53-227ENST00000622645 PLEKHB2Q96CS7 222 aa8.77□□□□□ -1.01
TP53-227ENST00000622645 MAP6D1Q9H9H5 199 aa8.77□□□□□ -1.01
TP53-227ENST00000622645 DEFB114Q30KQ6 69 aa8.76□□□□□ -1.01
TP53-227ENST00000622645 C12orf74Q32Q52 190 aa8.76□□□□□ -1.01
TP53-227ENST00000622645 TMEM170BQ5T4T1 132 aa8.76□□□□□ -1.01
TP53-227ENST00000622645 WNK1Q9H4A3 2382 aa8.76□□□□□ -1.01
TP53-227ENST00000622645 SCGB1D4Q6XE38 83 aa8.76□□□□□ -1.01
TP53-227ENST00000622645 Q9UF83 564 aa8.76□□□□□ -1.01
TP53-227ENST00000622645 FLNAP21333 2647 aaKnown RBP8.76□□□□□ -1.01
TP53-227ENST00000622645 A0A1W2PRX2 142 aa8.75□□□□□ -1.01
TP53-227ENST00000622645 A8MTW9 85 aa8.75□□□□□ -1.01
TP53-227ENST00000622645 I3L3M4 83 aa8.75□□□□□ -1.01
TP53-227ENST00000622645 NSUN5P1Q3KNT7 163 aa8.75□□□□□ -1.01
TP53-227ENST00000622645 SETD2Q9BYW2 2564 aaPredicted RBP8.75□□□□□ -1.01
TP53-227ENST00000622645 DNAJC9-AS1A6NH13 148 aa8.75□□□□□ -1.01
TP53-227ENST00000622645 G3V4G9 280 aa8.75□□□□□ -1.01
TP53-227ENST00000622645 COTL1Q14019 142 aa8.75□□□□□ -1.01
TP53-227ENST00000622645 RHOHQ15669 191 aa8.75□□□□□ -1.01
TP53-227ENST00000622645 PAPPA-AS1Q5QFB9 102 aa8.75□□□□□ -1.01
TP53-227ENST00000622645 C20orf203Q8NBC4 194 aa8.75□□□□□ -1.01
TP53-227ENST00000622645 IGLL5B9A064 214 aa8.74□□□□□ -1.01
TP53-227ENST00000622645 TRAV2A0A0B4J234 112 aa8.74□□□□□ -1.01
TP53-227ENST00000622645 LINC01587Q99440 93 aa8.74□□□□□ -1.01
TP53-227ENST00000622645 SPAG8Q99932 426 aaPredicted RBP8.74□□□□□ -1.01
TP53-227ENST00000622645 ESM1Q9NQ30 184 aa8.74□□□□□ -1.01
TP53-227ENST00000622645 AKAP9Q99996 3911 aa8.73□□□□□ -1.01
TP53-227ENST00000622645 TSPEAR-AS2P59090 65 aa8.73□□□□□ -1.01
TP53-227ENST00000622645 Q6ZSN1 163 aa8.73□□□□□ -1.01
TP53-227ENST00000622645 RAX2Q96IS3 184 aa8.73□□□□□ -1.01
TP53-227ENST00000622645 ACANP16112 2415 aa8.73□□□□□ -1.01
TP53-227ENST00000622645 M0R2P5 195 aa8.73□□□□□ -1.01
TP53-227ENST00000622645 HERVK_113P61574 105 aa8.73□□□□□ -1.01
TP53-227ENST00000622645 TENM4Q6N022 2769 aa8.73□□□□□ -1.01
TP53-227ENST00000622645 SRSF9Q13242 221 aaKnown RBP eCLIP8.72□□□□□ -1.01
TP53-227ENST00000622645 TMEM86BQ8N661 226 aa8.72□□□□□ -1.01
TP53-227ENST00000622645 ZNF479Q96JC4 524 aa8.72□□□□□ -1.01
TP53-227ENST00000622645 RPL24P83731 157 aaKnown RBP8.72□□□□□ -1.01
TP53-227ENST00000622645 ZNF415Q09FC8 603 aa8.71□□□□□ -1.01
TP53-227ENST00000622645 ODF3L2Q3SX64 289 aa8.71□□□□□ -1.01
TP53-227ENST00000622645 XCL2Q9UBD3 114 aa8.71□□□□□ -1.01
TP53-227ENST00000622645 IGLV4-3A0A075B6K6 122 aa8.71□□□□□ -1.02
TP53-227ENST00000622645 A8MWV9 139 aa8.71□□□□□ -1.02
TP53-227ENST00000622645 CD28P10747 220 aa8.71□□□□□ -1.02
TP53-227ENST00000622645 CEMP1Q6PRD7 247 aaPredicted RBP8.71□□□□□ -1.02
TP53-227ENST00000622645 C11orf72Q8NBR9 251 aa8.71□□□□□ -1.02
TP53-227ENST00000622645 MRPL16Q9NX20 251 aaKnown RBP8.71□□□□□ -1.02
TP53-227ENST00000622645 TNFRSF18Q9Y5U5 241 aa8.71□□□□□ -1.02
TP53-227ENST00000622645 A0A0J9YY99 117 aa8.7□□□□□ -1.02
TP53-227ENST00000622645 A0A1B0GWB2 263 aa8.7□□□□□ -1.02
TP53-227ENST00000622645 CFAP126Q5VTH2 177 aa8.7□□□□□ -1.02
TP53-227ENST00000622645 IGHV3-64A0A075B6Q5 118 aa8.7□□□□□ -1.02
TP53-227ENST00000622645 A0A0J9YXV3 536 aa8.7□□□□□ -1.02
TP53-227ENST00000622645 TEX48A0A1B0GUV7 120 aa8.7□□□□□ -1.02
TP53-227ENST00000622645 NFE4Q86UQ8 179 aa8.7□□□□□ -1.02
TP53-227ENST00000622645 VCX2Q9H322 139 aa8.7□□□□□ -1.02
TP53-227ENST00000622645 NACAE9PAV3 2078 aa8.7□□□□□ -1.02
TP53-227ENST00000622645 IGHV3OR16-12A0A075B7B8 117 aa8.69□□□□□ -1.02
TP53-227ENST00000622645 J3QQQ9 107 aa8.69□□□□□ -1.02
TP53-227ENST00000622645 CCL24O00175 119 aa8.69□□□□□ -1.02
TP53-227ENST00000622645 INSP01308 110 aa8.69□□□□□ -1.02
TP53-227ENST00000622645 AZU1P20160 251 aa8.69□□□□□ -1.02
TP53-227ENST00000622645 EDA2RQ9HAV5 297 aa8.69□□□□□ -1.02
TP53-227ENST00000622645 MTORP42345 2549 aa8.69□□□□□ -1.02
TP53-227ENST00000622645 H3BMG7 143 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms