RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 CFAP161Q6P656 301 aa5.3□□□□□ -1.56
NEDD9-216ENST00000620854 LY6G5BQ8NDX9 201 aa5.3□□□□□ -1.56
NEDD9-216ENST00000620854 C10orf105Q8TEF2 133 aa5.3□□□□□ -1.56
NEDD9-216ENST00000620854 POLQO75417 2590 aa5.3□□□□□ -1.56
NEDD9-216ENST00000620854 LY6LH3BQJ8 138 aa5.3□□□□□ -1.56
NEDD9-216ENST00000620854 RPL36AP83881 106 aaKnown RBP5.3□□□□□ -1.56
NEDD9-216ENST00000620854 CFHR3Q02985 330 aa5.3□□□□□ -1.56
NEDD9-216ENST00000620854 PRR9Q5T870 116 aa5.3□□□□□ -1.56
NEDD9-216ENST00000620854 RPL36ALQ969Q0 106 aaKnown RBP5.3□□□□□ -1.56
NEDD9-216ENST00000620854 TRBV7-3A0A075B6L6 115 aa5.3□□□□□ -1.56
NEDD9-216ENST00000620854 MALP21145 153 aa5.3□□□□□ -1.56
NEDD9-216ENST00000620854 SMCPP49901 116 aaPredicted RBP5.3□□□□□ -1.56
NEDD9-216ENST00000620854 PMVKQ15126 192 aa5.3□□□□□ -1.56
NEDD9-216ENST00000620854 USMG5Q96IX5 58 aa5.3□□□□□ -1.56
NEDD9-216ENST00000620854 JPT2Q9H910 190 aa5.3□□□□□ -1.56
NEDD9-216ENST00000620854 IGHV7-4-1A0A0J9YVY3 117 aa5.29□□□□□ -1.56
NEDD9-216ENST00000620854 RBMY1BA6NDE4 496 aaKnown RBP5.29□□□□□ -1.56
NEDD9-216ENST00000620854 RBMY1EA6NEQ0 496 aaKnown RBP5.29□□□□□ -1.56
NEDD9-216ENST00000620854 PRSS47A8MTI9 375 aa5.29□□□□□ -1.56
NEDD9-216ENST00000620854 RBMY1DP0C7P1 496 aaKnown RBP5.29□□□□□ -1.56
NEDD9-216ENST00000620854 RBMY1A1P0DJD3 496 aaKnown RBP5.29□□□□□ -1.56
NEDD9-216ENST00000620854 RBMY1CP0DJD4 496 aa5.29□□□□□ -1.56
NEDD9-216ENST00000620854 XGP55808 180 aa5.29□□□□□ -1.56
NEDD9-216ENST00000620854 RPL39P62891 51 aaKnown RBP5.29□□□□□ -1.56
NEDD9-216ENST00000620854 NSUN5P1Q3KNT7 163 aa5.29□□□□□ -1.56
NEDD9-216ENST00000620854 SPATA25Q9BR10 227 aa5.29□□□□□ -1.56
NEDD9-216ENST00000620854 PRO0461Q9UI25 63 aa5.29□□□□□ -1.56
NEDD9-216ENST00000620854 IGHV7-81A0A0B4J1V7 117 aa5.29□□□□□ -1.56
NEDD9-216ENST00000620854 HIST1H4AP62805 103 aaKnown RBP5.29□□□□□ -1.56
NEDD9-216ENST00000620854 FHL3Q13643 280 aa5.29□□□□□ -1.56
NEDD9-216ENST00000620854 MTORP42345 2549 aa5.29□□□□□ -1.56
NEDD9-216ENST00000620854 DEFB130BP0DP73 79 aa5.29□□□□□ -1.56
NEDD9-216ENST00000620854 DEFB130AP0DP74 79 aa5.29□□□□□ -1.56
NEDD9-216ENST00000620854 ZNF415Q09FC8 603 aa5.29□□□□□ -1.56
NEDD9-216ENST00000620854 Q6ZS46 218 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 FAM223BA6NKX1 122 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 RS1O15537 224 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 CRPP02741 224 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 C6orf226Q5I0X4 101 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 FAM223AQ8IWN6 122 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 OR11H6Q8NGC7 330 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 PIFOQ8TCI5 191 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 BAALCQ8WXS3 180 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 RASL10AQ92737 203 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 RNF183Q96D59 192 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 SS18L2Q9UHA2 77 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 GAGE12JA6NER3 117 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 GAGE4Q13068 117 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 GAGE5Q13069 117 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 OPRPNQ99935 248 aaPredicted RBP5.28□□□□□ -1.56
NEDD9-216ENST00000620854 C1QTNF4Q9BXJ3 329 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 CNFNQ9BYD5 112 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 CDIP1Q9H305 208 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 MUC4Q99102 2169 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 TRBV20-1A0A075B6N2 111 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 J3QQQ9 107 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 TCL1BO95988 128 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 PFN2P35080 140 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 CDSNQ15517 529 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 CFAP126Q5VTH2 177 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 GAGE2AQ6NT46 116 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 DPH3Q96FX2 82 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 PRO1854Q9UHT4 67 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 NDUFA12Q9UI09 145 aa5.28□□□□□ -1.56
NEDD9-216ENST00000620854 C11orf86A6NJI1 115 aa5.27□□□□□ -1.57
NEDD9-216ENST00000620854 TRPT1Q86TN4 253 aaKnown RBP5.27□□□□□ -1.57
NEDD9-216ENST00000620854 TMEM86BQ8N661 226 aa5.27□□□□□ -1.57
NEDD9-216ENST00000620854 NPBQ8NG41 125 aa5.27□□□□□ -1.57
NEDD9-216ENST00000620854 TMEM190Q8WZ59 177 aa5.27□□□□□ -1.57
NEDD9-216ENST00000620854 TAL2Q16559 108 aa5.27□□□□□ -1.57
NEDD9-216ENST00000620854 Q6ZUT4 128 aa5.27□□□□□ -1.57
NEDD9-216ENST00000620854 NTN5Q8WTR8 489 aaPredicted RBP5.27□□□□□ -1.57
NEDD9-216ENST00000620854 PPDPFLQ8WWR9 84 aa5.27□□□□□ -1.57
NEDD9-216ENST00000620854 ZNF48Q96MX3 618 aaPredicted RBP5.27□□□□□ -1.57
NEDD9-216ENST00000620854 PRRC2AP48634 2157 aaKnown RBP5.27□□□□□ -1.57
NEDD9-216ENST00000620854 IGHV1OR15-1A0A075B7D0 117 aa5.27□□□□□ -1.57
NEDD9-216ENST00000620854 CRIP2P52943 208 aaPredicted RBP5.27□□□□□ -1.57
NEDD9-216ENST00000620854 TCTEX1D4Q5JR98 221 aa5.27□□□□□ -1.57
NEDD9-216ENST00000620854 S100A7L2Q5SY68 101 aa5.27□□□□□ -1.57
NEDD9-216ENST00000620854 NEXN-AS1Q8NBZ9 246 aa5.27□□□□□ -1.57
NEDD9-216ENST00000620854 CELSR2Q9HCU4 2923 aa5.26□□□□□ -1.57
NEDD9-216ENST00000620854 CLPSL1A2RUU4 121 aa5.26□□□□□ -1.57
NEDD9-216ENST00000620854 ZFP36P26651 326 aaKnown RBP5.26□□□□□ -1.57
NEDD9-216ENST00000620854 ZNRF2Q8NHG8 242 aa5.26□□□□□ -1.57
NEDD9-216ENST00000620854 C20orf173Q96LM9 149 aa5.26□□□□□ -1.57
NEDD9-216ENST00000620854 CARD19Q96LW7 228 aa5.26□□□□□ -1.57
NEDD9-216ENST00000620854 CCDC140Q96MF4 163 aa5.26□□□□□ -1.57
NEDD9-216ENST00000620854 B5MCH6 92 aa5.26□□□□□ -1.57
NEDD9-216ENST00000620854 SLC25A20O43772 301 aa5.26□□□□□ -1.57
NEDD9-216ENST00000620854 TRBV12-3P01733 135 aa5.26□□□□□ -1.57
NEDD9-216ENST00000620854 BLCAPP62952 87 aa5.26□□□□□ -1.57
NEDD9-216ENST00000620854 Q8N9W7 124 aa5.26□□□□□ -1.57
NEDD9-216ENST00000620854 ZFAND3Q9H8U3 227 aa5.26□□□□□ -1.57
NEDD9-216ENST00000620854 EDA2RQ9HAV5 297 aa5.26□□□□□ -1.57
NEDD9-216ENST00000620854 CENPVL3A0A0U1RRI6 287 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 NXPH4O95158 308 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 INSP01308 110 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 UNQ9165/PRO28630Q6UXU0 137 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 COX8CQ7Z4L0 72 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 ANKRD29Q8N6D5 301 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms