RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 NPYP01303 97 aa5.67□□□□□ -1.5
TARDBP-219ENST00000617757 P0DMU3 169 aa5.67□□□□□ -1.5
TARDBP-219ENST00000617757 FAM231AP0DMU4 169 aa5.67□□□□□ -1.5
TARDBP-219ENST00000617757 FAM231CP0DMU5 169 aa5.67□□□□□ -1.5
TARDBP-219ENST00000617757 HTN3P15516 51 aa5.67□□□□□ -1.5
TARDBP-219ENST00000617757 CRYBA4P53673 196 aa5.67□□□□□ -1.5
TARDBP-219ENST00000617757 OR10J3Q5JRS4 329 aa5.67□□□□□ -1.5
TARDBP-219ENST00000617757 NIT2Q9NQR4 276 aa5.67□□□□□ -1.5
TARDBP-219ENST00000617757 Q9UF83 564 aa5.67□□□□□ -1.5
TARDBP-219ENST00000617757 HHLA3Q9XRX5 114 aa5.67□□□□□ -1.5
TARDBP-219ENST00000617757 LAMTOR2Q9Y2Q5 125 aa5.67□□□□□ -1.5
TARDBP-219ENST00000617757 TRBV10-1A0A0K0K1A3 114 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 HIST1H2BKO60814 126 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 PPP1R17O96001 155 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 HIST1H2BJP06899 126 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 HIST1H2BOP23527 126 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 HIST1H2BBP33778 126 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 HIST1H2BDP58876 126 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 HIST1H2BCP62807 126 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 RHOHQ15669 191 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 HIST2H2BEQ16778 126 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.66□□□□□ -1.5
TARDBP-219ENST00000617757 NEXN-AS1Q8NBZ9 246 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 C18orf32Q8TCD1 76 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 HIST1H2BHQ93079 126 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 DNAJC30Q96LL9 226 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 HIST1H2BNQ99877 126 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 HIST1H2BMQ99879 126 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 PRO0255Q9UI72 69 aa5.66□□□□□ -1.5
TARDBP-219ENST00000617757 CSMD3Q7Z407 3707 aa5.65□□□□□ -1.5
TARDBP-219ENST00000617757 DEFB131BA0A096LNP1 70 aa5.65□□□□□ -1.5
TARDBP-219ENST00000617757 TRBV6-5A0A0K0K1A5 114 aa5.65□□□□□ -1.5
TARDBP-219ENST00000617757 LOC100131303A0A0U1RQF7 123 aa5.65□□□□□ -1.5
TARDBP-219ENST00000617757 PRSS47A8MTI9 375 aa5.65□□□□□ -1.5
TARDBP-219ENST00000617757 PAX4O43316 350 aa5.65□□□□□ -1.5
TARDBP-219ENST00000617757 POLR2KP53803 58 aaKnown RBP5.65□□□□□ -1.5
TARDBP-219ENST00000617757 RAB5BP61020 215 aa5.65□□□□□ -1.5
TARDBP-219ENST00000617757 IQCJQ1A5X6 159 aa5.65□□□□□ -1.5
TARDBP-219ENST00000617757 VSIG2Q96IQ7 327 aa5.65□□□□□ -1.5
TARDBP-219ENST00000617757 C20orf78Q9BR46 151 aa5.65□□□□□ -1.5
TARDBP-219ENST00000617757 PRADC1Q9BSG0 188 aa5.65□□□□□ -1.5
TARDBP-219ENST00000617757 ST20Q9HBF5 79 aa5.65□□□□□ -1.5
TARDBP-219ENST00000617757 TRBV7-3A0A075B6L6 115 aa5.64□□□□□ -1.51
TARDBP-219ENST00000617757 TRAV26-1A0A087WT03 109 aa5.64□□□□□ -1.51
TARDBP-219ENST00000617757 TRAV10A0A0B4J240 114 aa5.64□□□□□ -1.51
TARDBP-219ENST00000617757 A0A0J9YY99 117 aa5.64□□□□□ -1.51
TARDBP-219ENST00000617757 LOC389332A0A1B0GUA5 103 aa5.64□□□□□ -1.51
TARDBP-219ENST00000617757 SDHAF1A6NFY7 115 aa5.64□□□□□ -1.51
TARDBP-219ENST00000617757 GYPEP15421 78 aa5.64□□□□□ -1.51
TARDBP-219ENST00000617757 SUMO2P61956 95 aaKnown RBP5.64□□□□□ -1.51
TARDBP-219ENST00000617757 RPL36AP83881 106 aaKnown RBP5.64□□□□□ -1.51
TARDBP-219ENST00000617757 Q0VG73 95 aa5.64□□□□□ -1.51
TARDBP-219ENST00000617757 ZNRF2Q8NHG8 242 aa5.64□□□□□ -1.51
TARDBP-219ENST00000617757 RPL36ALQ969Q0 106 aaKnown RBP5.64□□□□□ -1.51
TARDBP-219ENST00000617757 MAP1LC3AQ9H492 121 aa5.64□□□□□ -1.51
TARDBP-219ENST00000617757 TNFRSF18Q9Y5U5 241 aa5.64□□□□□ -1.51
TARDBP-219ENST00000617757 IGLV2-18A0A075B6J9 118 aa5.63□□□□□ -1.51
TARDBP-219ENST00000617757 GAGE12JA6NER3 117 aa5.63□□□□□ -1.51
TARDBP-219ENST00000617757 LINC00694P0DN24 101 aa5.63□□□□□ -1.51
TARDBP-219ENST00000617757 IFI27P40305 119 aaPredicted RBP5.63□□□□□ -1.51
TARDBP-219ENST00000617757 UBE2D3P61077 147 aa5.63□□□□□ -1.51
TARDBP-219ENST00000617757 UBE2D2P62837 147 aa5.63□□□□□ -1.51
TARDBP-219ENST00000617757 RPL32P62910 135 aaKnown RBP5.63□□□□□ -1.51
TARDBP-219ENST00000617757 GAGE1Q13065 139 aa5.63□□□□□ -1.51
TARDBP-219ENST00000617757 GAGE4Q13068 117 aa5.63□□□□□ -1.51
TARDBP-219ENST00000617757 GAGE5Q13069 117 aa5.63□□□□□ -1.51
TARDBP-219ENST00000617757 GAGE13Q4V321 117 aa5.63□□□□□ -1.51
TARDBP-219ENST00000617757 Q8N8P6 123 aa5.63□□□□□ -1.51
TARDBP-219ENST00000617757 PHLDA1Q8WV24 401 aaPredicted RBP5.63□□□□□ -1.51
TARDBP-219ENST00000617757 URB1-AS1Q96HZ7 61 aa5.63□□□□□ -1.51
TARDBP-219ENST00000617757 TMEM70Q9BUB7 260 aa5.63□□□□□ -1.51
TARDBP-219ENST00000617757 SMIM2Q9BVW6 85 aa5.63□□□□□ -1.51
TARDBP-219ENST00000617757 TRBV27A0A0K0K1C4 114 aa5.62□□□□□ -1.51
TARDBP-219ENST00000617757 H3BNG1 76 aa5.62□□□□□ -1.51
TARDBP-219ENST00000617757 I3L3M4 83 aa5.62□□□□□ -1.51
TARDBP-219ENST00000617757 VCYO14598 125 aa5.62□□□□□ -1.51
TARDBP-219ENST00000617757 NDUFA6P56556 154 aa5.62□□□□□ -1.51
TARDBP-219ENST00000617757 NEGR1Q7Z3B1 354 aa5.62□□□□□ -1.51
TARDBP-219ENST00000617757 NIT1Q86X76 327 aa5.62□□□□□ -1.51
TARDBP-219ENST00000617757 BAGE3Q86Y29 109 aa5.62□□□□□ -1.51
TARDBP-219ENST00000617757 PRSS3P2Q8NHM4 247 aa5.62□□□□□ -1.51
TARDBP-219ENST00000617757 NXT2Q9NPJ8 142 aaKnown RBP5.62□□□□□ -1.51
TARDBP-219ENST00000617757 PLECQ15149 4684 aaKnown RBP5.62□□□□□ -1.51
TARDBP-219ENST00000617757 A0A096LPF7 62 aa5.61□□□□□ -1.51
TARDBP-219ENST00000617757 IGHV3-38A0A0C4DH36 116 aa5.61□□□□□ -1.51
TARDBP-219ENST00000617757 LINC00614P0C842 121 aa5.61□□□□□ -1.51
TARDBP-219ENST00000617757 PMCHP20382 165 aa5.61□□□□□ -1.51
TARDBP-219ENST00000617757 LINC00310P59036 64 aa5.61□□□□□ -1.51
TARDBP-219ENST00000617757 MRPL23Q16540 153 aaKnown RBP5.61□□□□□ -1.51
TARDBP-219ENST00000617757 COA6Q5JTJ3 125 aaKnown RBP5.61□□□□□ -1.51
TARDBP-219ENST00000617757 DAZ4Q86SG3 579 aaKnown RBP5.61□□□□□ -1.51
TARDBP-219ENST00000617757 LINC00528Q8N1L1 170 aa5.61□□□□□ -1.51
TARDBP-219ENST00000617757 DAZ3Q9NR90 486 aaKnown RBP5.61□□□□□ -1.51
TARDBP-219ENST00000617757 ICOSQ9Y6W8 199 aa5.61□□□□□ -1.51
TARDBP-219ENST00000617757 STARD9Q9P2P6 4700 aa5.6□□□□□ -1.51
TARDBP-219ENST00000617757 LINC01546A6NGU7 62 aa5.6□□□□□ -1.51
TARDBP-219ENST00000617757 TCAPO15273 167 aa5.6□□□□□ -1.51
TARDBP-219ENST00000617757 NUPR1O60356 82 aa5.6□□□□□ -1.51
TARDBP-219ENST00000617757 NUDT3O95989 172 aa5.6□□□□□ -1.51
TARDBP-219ENST00000617757 TSHBP01222 138 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms