RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 BUB3O43684 328 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 CDK2AP2O75956 126 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 DUSP14O95147 198 aaKnown RBP3.67□□□□□ -1.82
VRK3-226ENST00000602029 ATP5G1P05496 136 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 CAMPP49913 170 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 HNRNPA3P51991 378 aaKnown RBP3.67□□□□□ -1.82
VRK3-226ENST00000602029 HIST1H1AQ02539 215 aaPredicted RBP3.67□□□□□ -1.82
VRK3-226ENST00000602029 TTC32Q5I0X7 151 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 LCE2AQ5TA79 106 aaPredicted RBP3.67□□□□□ -1.82
VRK3-226ENST00000602029 RNASEKQ6P5S7 137 aaKnown RBP3.67□□□□□ -1.82
VRK3-226ENST00000602029 PRNTQ86SH4 94 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 ORMDL3Q8N138 153 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 OR10AG1Q8NH19 301 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 ZC2HC1AQ96GY0 325 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 PAM16Q9Y3D7 125 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 U3KQE9 123 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 SRRM2Q9UQ35 2752 aaKnown RBP3.66□□□□□ -1.82
VRK3-226ENST00000602029 TRAV12-2A0A075B6T6 113 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 A0A0J9YX75 114 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 A0A0J9YY99 117 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 LINC01546A6NGU7 62 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 LYRM9A8MSI8 78 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 FABP5P3A8MUU1 101 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 EPM2AB3EWF7 344 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 SPINK4O60575 86 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 PRM2P04554 102 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 IGLC6P0CF74 106 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 PRB4P10163 310 aaPredicted RBP3.66□□□□□ -1.82
VRK3-226ENST00000602029 NTF3P20783 257 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 TSPOP30536 169 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 KIAA1644Q3SXP7 199 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 LINC01545Q5VT33 79 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 IGFL4Q6B9Z1 124 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 C1orf158Q8N1D5 194 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 Q8N1X5 172 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 ORAOV1Q8WV07 137 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 PGLYRP4Q96LB8 373 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 RPH3ALQ9UNE2 315 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 AGRNO00468 2067 aa3.66□□□□□ -1.82
VRK3-226ENST00000602029 PRSS47A8MTI9 375 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 J3KRW8 73 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 SIVA1O15304 175 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 DLEU1O43261 78 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 SNRPCP09234 159 aaKnown RBP3.65□□□□□ -1.83
VRK3-226ENST00000602029 INAFM2P0DMQ5 153 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 CACNG7P62955 275 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 KIR3DS1Q14943 382 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 FAM104BQ5XKR9 115 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 SLC25A34Q6PIV7 304 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 Q6ZN92 141 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 C9orf47Q6ZRZ4 202 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 FA2HQ7L5A8 372 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 SMIM15Q7Z3B0 74 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 EXOC3-AS1Q8N2X6 119 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 FAM19A2Q8N3H0 131 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 RNF182Q8N6D2 247 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 OR10J6PQ8NGY7 276 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 URB1-AS1Q96HZ7 61 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 SSBP4Q9BWG4 385 aaPredicted RBP3.65□□□□□ -1.83
VRK3-226ENST00000602029 Q9H8V8 135 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 NOP10Q9NPE3 64 aaKnown RBP3.65□□□□□ -1.83
VRK3-226ENST00000602029 NXT2Q9NPJ8 142 aaKnown RBP3.65□□□□□ -1.83
VRK3-226ENST00000602029 LINC00588Q9Y4M8 146 aa3.65□□□□□ -1.83
VRK3-226ENST00000602029 TIMM8BQ9Y5J9 83 aaPredicted RBP3.65□□□□□ -1.83
VRK3-226ENST00000602029 TRAV26-1A0A087WT03 109 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 TRAV8-1A0A0A6YYK1 113 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 GAGE12BA1L429 117 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 CBY3A6NI87 242 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 SH2D1AO60880 128 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 GAGE7O76087 117 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 PPP1R17O96001 155 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 HBDP02042 147 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 ARMS2P0C7Q2 107 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 GAGE12FP0CL80 117 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 GAGE12GP0CL81 117 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 GAGE12IP0CL82 117 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 G0S2P27469 103 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 SEC11AP67812 179 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 TMEM78Q5T7P6 136 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 FER1L6-AS1Q8NA97 138 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 ZNRF2Q8NHG8 242 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 PRSS3P2Q8NHM4 247 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 C16orf74Q96GX8 76 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 C20orf173Q96LM9 149 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 PRELID3AQ96N28 172 aa3.64□□□□□ -1.83
VRK3-226ENST00000602029 RNF213Q63HN8 5207 aa3.63□□□□□ -1.83
VRK3-226ENST00000602029 TRGV2A0A075B6R0 118 aa3.63□□□□□ -1.83
VRK3-226ENST00000602029 SNAI2O43623 268 aa3.63□□□□□ -1.83
VRK3-226ENST00000602029 COX8AP10176 69 aa3.63□□□□□ -1.83
VRK3-226ENST00000602029 AZU1P20160 251 aa3.63□□□□□ -1.83
VRK3-226ENST00000602029 CRIP1P50238 77 aa3.63□□□□□ -1.83
VRK3-226ENST00000602029 ZNF138P52744 262 aa3.63□□□□□ -1.83
VRK3-226ENST00000602029 TDRG1Q3Y452 100 aa3.63□□□□□ -1.83
VRK3-226ENST00000602029 LYZL1Q6UWQ5 148 aa3.63□□□□□ -1.83
VRK3-226ENST00000602029 BOD1L2Q8IYS8 172 aa3.63□□□□□ -1.83
VRK3-226ENST00000602029 MAP1LC3AQ9H492 121 aa3.63□□□□□ -1.83
VRK3-226ENST00000602029 M0R381 172 aa3.62□□□□□ -1.83
VRK3-226ENST00000602029 M0R3E3 92 aa3.62□□□□□ -1.83
VRK3-226ENST00000602029 SOCS3O14543 225 aa3.62□□□□□ -1.83
VRK3-226ENST00000602029 ATP5LO75964 103 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms