RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 X6R8D5 127 aa9.84□□□□□ -0.83
IRF3-229ENST00000601373 TRAV4A0A0B4J268 109 aa9.83□□□□□ -0.84
IRF3-229ENST00000601373 M0QY20 66 aa9.83□□□□□ -0.84
IRF3-229ENST00000601373 DEFB135Q30KP9 77 aa9.83□□□□□ -0.84
IRF3-229ENST00000601373 FAM19A2Q8N3H0 131 aa9.83□□□□□ -0.84
IRF3-229ENST00000601373 OR11H2Q8NH07 326 aa9.83□□□□□ -0.84
IRF3-229ENST00000601373 SMIM2Q9BVW6 85 aa9.83□□□□□ -0.84
IRF3-229ENST00000601373 IGLV2-18A0A075B6J9 118 aa9.82□□□□□ -0.84
IRF3-229ENST00000601373 SCGB1D1O95968 90 aa9.82□□□□□ -0.84
IRF3-229ENST00000601373 MIFP14174 115 aa9.82□□□□□ -0.84
IRF3-229ENST00000601373 Q6ZTI0 123 aa9.82□□□□□ -0.84
IRF3-229ENST00000601373 RPL39LQ96EH5 51 aaKnown RBP9.82□□□□□ -0.84
IRF3-229ENST00000601373 NBEAL2Q6ZNJ1 2754 aa9.81□□□□□ -0.84
IRF3-229ENST00000601373 IGHV1-24A0A0C4DH33 117 aa9.81□□□□□ -0.84
IRF3-229ENST00000601373 VCYO14598 125 aa9.81□□□□□ -0.84
IRF3-229ENST00000601373 IGHV3-53P01767 116 aa9.81□□□□□ -0.84
IRF3-229ENST00000601373 TP53TG1Q9Y2A0 90 aa9.81□□□□□ -0.84
IRF3-229ENST00000601373 TRGV2A0A075B6R0 118 aa9.8□□□□□ -0.84
IRF3-229ENST00000601373 GAGE12BA1L429 117 aa9.8□□□□□ -0.84
IRF3-229ENST00000601373 LYRM9A8MSI8 78 aa9.8□□□□□ -0.84
IRF3-229ENST00000601373 GAGE7O76087 117 aa9.8□□□□□ -0.84
IRF3-229ENST00000601373 GAGE12FP0CL80 117 aa9.8□□□□□ -0.84
IRF3-229ENST00000601373 GAGE12GP0CL81 117 aa9.8□□□□□ -0.84
IRF3-229ENST00000601373 GAGE12IP0CL82 117 aa9.8□□□□□ -0.84
IRF3-229ENST00000601373 POLR2KP53803 58 aaKnown RBP9.8□□□□□ -0.84
IRF3-229ENST00000601373 LAGE3Q14657 143 aa9.8□□□□□ -0.84
IRF3-229ENST00000601373 KPRPQ5T749 579 aaPredicted RBP9.8□□□□□ -0.84
IRF3-229ENST00000601373 DNAJC30Q96LL9 226 aa9.8□□□□□ -0.84
IRF3-229ENST00000601373 C18orf15Q96N68 181 aa9.8□□□□□ -0.84
IRF3-229ENST00000601373 IGHV3-73A0A0B4J1V6 119 aa9.79□□□□□ -0.84
IRF3-229ENST00000601373 TCAPO15273 167 aa9.79□□□□□ -0.84
IRF3-229ENST00000601373 LEPROTL1O95214 131 aa9.79□□□□□ -0.84
IRF3-229ENST00000601373 HBDP02042 147 aa9.79□□□□□ -0.84
IRF3-229ENST00000601373 G0S2P27469 103 aa9.79□□□□□ -0.84
IRF3-229ENST00000601373 FCER1GP30273 86 aa9.79□□□□□ -0.84
IRF3-229ENST00000601373 ORMDL2Q53FV1 153 aa9.79□□□□□ -0.84
IRF3-229ENST00000601373 LINC00612Q8N6U2 182 aa9.79□□□□□ -0.84
IRF3-229ENST00000601373 TMEM70Q9BUB7 260 aa9.79□□□□□ -0.84
IRF3-229ENST00000601373 HSPB8Q9UJY1 196 aa9.79□□□□□ -0.84
IRF3-229ENST00000601373 SDHAF1A6NFY7 115 aa9.78□□□□□ -0.84
IRF3-229ENST00000601373 EMP1P54849 157 aa9.78□□□□□ -0.84
IRF3-229ENST00000601373 PMCHL1Q16048 86 aa9.78□□□□□ -0.84
IRF3-229ENST00000601373 KIR2DL4Q99706 377 aa9.78□□□□□ -0.84
IRF3-229ENST00000601373 TNFRSF18Q9Y5U5 241 aa9.78□□□□□ -0.84
IRF3-229ENST00000601373 NACAE9PAV3 2078 aa9.78□□□□□ -0.84
IRF3-229ENST00000601373 IGHV4-28A0A0C4DH34 117 aa9.77□□□□□ -0.85
IRF3-229ENST00000601373 TRBV10-1A0A0K0K1A3 114 aa9.77□□□□□ -0.85
IRF3-229ENST00000601373 TRBV27A0A0K0K1C4 114 aa9.77□□□□□ -0.85
IRF3-229ENST00000601373 C20orf202A1L168 122 aa9.77□□□□□ -0.85
IRF3-229ENST00000601373 ZNF479Q96JC4 524 aa9.77□□□□□ -0.85
IRF3-229ENST00000601373 LINC01549A6NIU2 74 aa9.76□□□□□ -0.85
IRF3-229ENST00000601373 Q6ZSN1 163 aa9.76□□□□□ -0.85
IRF3-229ENST00000601373 Q8NAQ8 132 aa9.76□□□□□ -0.85
IRF3-229ENST00000601373 A0A096LNJ9 63 aa9.75□□□□□ -0.85
IRF3-229ENST00000601373 TEX48A0A1B0GUV7 120 aa9.75□□□□□ -0.85
IRF3-229ENST00000601373 TRBV6-4A0A1B0GX49 114 aa9.75□□□□□ -0.85
IRF3-229ENST00000601373 I3L3M4 83 aa9.75□□□□□ -0.85
IRF3-229ENST00000601373 NUDT3O95989 172 aa9.75□□□□□ -0.85
IRF3-229ENST00000601373 BTF3P20290 206 aaKnown RBP9.75□□□□□ -0.85
IRF3-229ENST00000601373 KRTDAPP60985 99 aa9.75□□□□□ -0.85
IRF3-229ENST00000601373 MAP1LC3CQ9BXW4 147 aa9.75□□□□□ -0.85
IRF3-229ENST00000601373 TRGV4A0A0C4DH28 118 aa9.74□□□□□ -0.85
IRF3-229ENST00000601373 K7EQD1 137 aa9.74□□□□□ -0.85
IRF3-229ENST00000601373 C3orf79P0CE67 100 aa9.74□□□□□ -0.85
IRF3-229ENST00000601373 SPART-AS1P0CW21 52 aa9.74□□□□□ -0.85
IRF3-229ENST00000601373 DEFB130BP0DP73 79 aa9.74□□□□□ -0.85
IRF3-229ENST00000601373 DEFB130AP0DP74 79 aa9.74□□□□□ -0.85
IRF3-229ENST00000601373 LBHQ53QV2 105 aaPredicted RBP9.74□□□□□ -0.85
IRF3-229ENST00000601373 FAM222AQ5U5X8 452 aa9.74□□□□□ -0.85
IRF3-229ENST00000601373 TEX43Q6ZNM6 134 aa9.74□□□□□ -0.85
IRF3-229ENST00000601373 NEXN-AS1Q8NBZ9 246 aa9.74□□□□□ -0.85
IRF3-229ENST00000601373 VAMP8Q9BV40 100 aa9.74□□□□□ -0.85
IRF3-229ENST00000601373 DKK2Q9UBU2 259 aa9.74□□□□□ -0.85
IRF3-229ENST00000601373 DNAH3Q8TD57 4116 aa9.74□□□□□ -0.85
IRF3-229ENST00000601373 DDTP30046 118 aa9.73□□□□□ -0.85
IRF3-229ENST00000601373 RPL36AP83881 106 aaKnown RBP9.73□□□□□ -0.85
IRF3-229ENST00000601373 RHOHQ15669 191 aa9.73□□□□□ -0.85
IRF3-229ENST00000601373 MRPL52Q86TS9 123 aaKnown RBP9.73□□□□□ -0.85
IRF3-229ENST00000601373 RPL36ALQ969Q0 106 aaKnown RBP9.73□□□□□ -0.85
IRF3-229ENST00000601373 TRBV7-3A0A075B6L6 115 aa9.72□□□□□ -0.85
IRF3-229ENST00000601373 ATP5LO75964 103 aa9.72□□□□□ -0.85
IRF3-229ENST00000601373 P0DMU3 169 aa9.72□□□□□ -0.85
IRF3-229ENST00000601373 FAM231AP0DMU4 169 aa9.72□□□□□ -0.85
IRF3-229ENST00000601373 FAM231CP0DMU5 169 aa9.72□□□□□ -0.85
IRF3-229ENST00000601373 FHL2Q14192 279 aa9.72□□□□□ -0.85
IRF3-229ENST00000601373 PET117Q6UWS5 81 aa9.72□□□□□ -0.85
IRF3-229ENST00000601373 SLC25A29Q8N8R3 303 aa9.72□□□□□ -0.85
IRF3-229ENST00000601373 PRADC1Q9BSG0 188 aa9.72□□□□□ -0.85
IRF3-229ENST00000601373 SYS1-DBNDD2H3BUS1 97 aa9.71□□□□□ -0.86
IRF3-229ENST00000601373 K7EIL1 84 aa9.71□□□□□ -0.86
IRF3-229ENST00000601373 DAD1P61803 113 aa9.71□□□□□ -0.86
IRF3-229ENST00000601373 NEGR1Q7Z3B1 354 aa9.71□□□□□ -0.86
IRF3-229ENST00000601373 MRAPQ8TCY5 172 aa9.71□□□□□ -0.86
IRF3-229ENST00000601373 TOMM6Q96B49 74 aa9.71□□□□□ -0.86
IRF3-229ENST00000601373 IFI27L1Q96BM0 104 aa9.71□□□□□ -0.86
IRF3-229ENST00000601373 LINC00587B1AMM8 73 aa9.7□□□□□ -0.86
IRF3-229ENST00000601373 DEFB4AO15263 64 aa9.7□□□□□ -0.86
IRF3-229ENST00000601373 TSHBP01222 138 aa9.7□□□□□ -0.86
IRF3-229ENST00000601373 DEFB121Q5J5C9 76 aa9.7□□□□□ -0.86
IRF3-229ENST00000601373 C2orf66Q6UXQ4 117 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms