RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SERF1AO75920 110 aa9.59□□□□□ -0.87
VMP1-217ENST00000593168 EMP1P54849 157 aa9.59□□□□□ -0.87
VMP1-217ENST00000593168 ZNF56Q15929 161 aa9.59□□□□□ -0.87
VMP1-217ENST00000593168 NIT1Q86X76 327 aa9.59□□□□□ -0.87
VMP1-217ENST00000593168 CHCHD1Q96BP2 118 aaKnown RBP9.59□□□□□ -0.87
VMP1-217ENST00000593168 C20orf78Q9BR46 151 aa9.59□□□□□ -0.87
VMP1-217ENST00000593168 MAP1LC3AQ9H492 121 aa9.59□□□□□ -0.87
VMP1-217ENST00000593168 NACAE9PAV3 2078 aa9.59□□□□□ -0.87
VMP1-217ENST00000593168 PLECQ15149 4684 aaKnown RBP9.58□□□□□ -0.88
VMP1-217ENST00000593168 LOC105371267A0A1B0GV96 52 aa9.58□□□□□ -0.88
VMP1-217ENST00000593168 GAGE12BA1L429 117 aa9.58□□□□□ -0.88
VMP1-217ENST00000593168 NUPR1O60356 82 aa9.58□□□□□ -0.88
VMP1-217ENST00000593168 GAGE7O76087 117 aa9.58□□□□□ -0.88
VMP1-217ENST00000593168 IGHV3-53P01767 116 aa9.58□□□□□ -0.88
VMP1-217ENST00000593168 LINC00614P0C842 121 aa9.58□□□□□ -0.88
VMP1-217ENST00000593168 GAGE12FP0CL80 117 aa9.58□□□□□ -0.88
VMP1-217ENST00000593168 GAGE12GP0CL81 117 aa9.58□□□□□ -0.88
VMP1-217ENST00000593168 GAGE12IP0CL82 117 aa9.58□□□□□ -0.88
VMP1-217ENST00000593168 HIST3H2BBQ8N257 126 aa9.58□□□□□ -0.88
VMP1-217ENST00000593168 PRSS3P2Q8NHM4 247 aa9.58□□□□□ -0.88
VMP1-217ENST00000593168 URB1-AS1Q96HZ7 61 aa9.58□□□□□ -0.88
VMP1-217ENST00000593168 TRGV2A0A075B6R0 118 aa9.57□□□□□ -0.88
VMP1-217ENST00000593168 TRBV6-5A0A0K0K1A5 114 aa9.57□□□□□ -0.88
VMP1-217ENST00000593168 LOC389332A0A1B0GUA5 103 aa9.57□□□□□ -0.88
VMP1-217ENST00000593168 SUMO2P61956 95 aaKnown RBP9.57□□□□□ -0.88
VMP1-217ENST00000593168 ZFAND6Q6FIF0 208 aa9.57□□□□□ -0.88
VMP1-217ENST00000593168 RPL39LQ96EH5 51 aaKnown RBP9.57□□□□□ -0.88
VMP1-217ENST00000593168 NXT2Q9NPJ8 142 aaKnown RBP9.57□□□□□ -0.88
VMP1-217ENST00000593168 DKK2Q9UBU2 259 aa9.57□□□□□ -0.88
VMP1-217ENST00000593168 IGHV3-73A0A0B4J1V6 119 aa9.56□□□□□ -0.88
VMP1-217ENST00000593168 HSBP1O75506 76 aa9.56□□□□□ -0.88
VMP1-217ENST00000593168 S100A2P29034 98 aa9.56□□□□□ -0.88
VMP1-217ENST00000593168 IFI27P40305 119 aaPredicted RBP9.56□□□□□ -0.88
VMP1-217ENST00000593168 RPL32P62910 135 aaKnown RBP9.56□□□□□ -0.88
VMP1-217ENST00000593168 FAM222AQ5U5X8 452 aa9.56□□□□□ -0.88
VMP1-217ENST00000593168 FA2HQ7L5A8 372 aa9.56□□□□□ -0.88
VMP1-217ENST00000593168 Q8N8P6 123 aa9.56□□□□□ -0.88
VMP1-217ENST00000593168 ZNF479Q96JC4 524 aa9.56□□□□□ -0.88
VMP1-217ENST00000593168 KRTAP17-1Q9BYP8 105 aa9.56□□□□□ -0.88
VMP1-217ENST00000593168 NIT2Q9NQR4 276 aa9.56□□□□□ -0.88
VMP1-217ENST00000593168 IGLV2-18A0A075B6J9 118 aa9.55□□□□□ -0.88
VMP1-217ENST00000593168 LINC01546A6NGU7 62 aa9.55□□□□□ -0.88
VMP1-217ENST00000593168 PMCHP20382 165 aa9.55□□□□□ -0.88
VMP1-217ENST00000593168 RNASEKQ6P5S7 137 aaKnown RBP9.55□□□□□ -0.88
VMP1-217ENST00000593168 Q6ZSN1 163 aa9.55□□□□□ -0.88
VMP1-217ENST00000593168 TMEM18Q96B42 140 aa9.55□□□□□ -0.88
VMP1-217ENST00000593168 PACRGQ96M98 296 aaPredicted RBP9.55□□□□□ -0.88
VMP1-217ENST00000593168 ST20Q9HBF5 79 aa9.55□□□□□ -0.88
VMP1-217ENST00000593168 AP5S1Q9NUS5 200 aa9.55□□□□□ -0.88
VMP1-217ENST00000593168 IFITM10A6NMD0 228 aa9.54□□□□□ -0.88
VMP1-217ENST00000593168 DEFB4AO15263 64 aa9.54□□□□□ -0.88
VMP1-217ENST00000593168 SPART-AS1P0CW21 52 aa9.54□□□□□ -0.88
VMP1-217ENST00000593168 DEFB130BP0DP73 79 aa9.54□□□□□ -0.88
VMP1-217ENST00000593168 DEFB130AP0DP74 79 aa9.54□□□□□ -0.88
VMP1-217ENST00000593168 POLR2KP53803 58 aaKnown RBP9.54□□□□□ -0.88
VMP1-217ENST00000593168 PDZD11Q5EBL8 140 aa9.54□□□□□ -0.88
VMP1-217ENST00000593168 DNAJC30Q96LL9 226 aa9.54□□□□□ -0.88
VMP1-217ENST00000593168 SPATA25Q9BR10 227 aa9.54□□□□□ -0.88
VMP1-217ENST00000593168 TM2D3Q9BRN9 247 aa9.54□□□□□ -0.88
VMP1-217ENST00000593168 SMIM2Q9BVW6 85 aa9.54□□□□□ -0.88
VMP1-217ENST00000593168 RETNQ9HD89 108 aa9.54□□□□□ -0.88
VMP1-217ENST00000593168 TRBV10-1A0A0K0K1A3 114 aa9.53□□□□□ -0.88
VMP1-217ENST00000593168 TEX48A0A1B0GUV7 120 aa9.53□□□□□ -0.88
VMP1-217ENST00000593168 K7EMI3 77 aa9.53□□□□□ -0.88
VMP1-217ENST00000593168 VCYO14598 125 aa9.53□□□□□ -0.88
VMP1-217ENST00000593168 HIST1H2BLQ99880 126 aa9.53□□□□□ -0.88
VMP1-217ENST00000593168 TRBV6-4A0A1B0GX49 114 aa9.52□□□□□ -0.89
VMP1-217ENST00000593168 AMTP48728 403 aa9.52□□□□□ -0.89
VMP1-217ENST00000593168 FHL2Q14192 279 aa9.52□□□□□ -0.89
VMP1-217ENST00000593168 TMEM70Q9BUB7 260 aa9.52□□□□□ -0.89
VMP1-217ENST00000593168 C11orf68Q9H3H3 251 aaKnown RBP9.52□□□□□ -0.89
VMP1-217ENST00000593168 ZMAT4Q9H898 229 aa9.52□□□□□ -0.89
VMP1-217ENST00000593168 TRGV4A0A0C4DH28 118 aa9.51□□□□□ -0.89
VMP1-217ENST00000593168 TRBV27A0A0K0K1C4 114 aa9.51□□□□□ -0.89
VMP1-217ENST00000593168 SDHAF1A6NFY7 115 aa9.51□□□□□ -0.89
VMP1-217ENST00000593168 DAD1P61803 113 aa9.51□□□□□ -0.89
VMP1-217ENST00000593168 SLC25A29Q8N8R3 303 aa9.51□□□□□ -0.89
VMP1-217ENST00000593168 NEXN-AS1Q8NBZ9 246 aa9.51□□□□□ -0.89
VMP1-217ENST00000593168 TNFRSF18Q9Y5U5 241 aa9.51□□□□□ -0.89
VMP1-217ENST00000593168 K7EQD1 137 aa9.5□□□□□ -0.89
VMP1-217ENST00000593168 P0DMU3 169 aa9.5□□□□□ -0.89
VMP1-217ENST00000593168 FAM231AP0DMU4 169 aa9.5□□□□□ -0.89
VMP1-217ENST00000593168 FAM231CP0DMU5 169 aa9.5□□□□□ -0.89
VMP1-217ENST00000593168 FABP4P15090 132 aa9.5□□□□□ -0.89
VMP1-217ENST00000593168 LAGE3Q14657 143 aa9.5□□□□□ -0.89
VMP1-217ENST00000593168 FAM19A2Q8N3H0 131 aa9.5□□□□□ -0.89
VMP1-217ENST00000593168 CELA1Q9UNI1 258 aa9.5□□□□□ -0.89
VMP1-217ENST00000593168 ALMS1Q8TCU4 4167 aa9.49□□□□□ -0.89
VMP1-217ENST00000593168 IGHV1-24A0A0C4DH33 117 aa9.49□□□□□ -0.89
VMP1-217ENST00000593168 TCAPO15273 167 aa9.49□□□□□ -0.89
VMP1-217ENST00000593168 RHOHQ15669 191 aa9.49□□□□□ -0.89
VMP1-217ENST00000593168 ORMDL2Q53FV1 153 aa9.49□□□□□ -0.89
VMP1-217ENST00000593168 KIR2DL4Q99706 377 aa9.49□□□□□ -0.89
VMP1-217ENST00000593168 TRBV7-3A0A075B6L6 115 aa9.48□□□□□ -0.89
VMP1-217ENST00000593168 I3L3M4 83 aa9.48□□□□□ -0.89
VMP1-217ENST00000593168 ATP5G1P05496 136 aa9.48□□□□□ -0.89
VMP1-217ENST00000593168 FCER1GP30273 86 aa9.48□□□□□ -0.89
VMP1-217ENST00000593168 RPL36AP83881 106 aaKnown RBP9.48□□□□□ -0.89
VMP1-217ENST00000593168 OR10D4PQ8NGN7 298 aa9.48□□□□□ -0.89
VMP1-217ENST00000593168 RPL36ALQ969Q0 106 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms