RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 CDIP1Q9H305 208 aa9.14□□□□□ -0.95
PDE4A-207ENST00000590407 A0A1B0GV72 72 aa9.13□□□□□ -0.95
PDE4A-207ENST00000590407 PIEZO1Q92508 2521 aa9.13□□□□□ -0.95
PDE4A-207ENST00000590407 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.12□□□□□ -0.95
PDE4A-207ENST00000590407 A8MWV9 139 aa9.12□□□□□ -0.95
PDE4A-207ENST00000590407 AVPP01185 164 aa9.12□□□□□ -0.95
PDE4A-207ENST00000590407 IGHV3-33P01772 117 aa9.12□□□□□ -0.95
PDE4A-207ENST00000590407 ELANEP08246 267 aa9.12□□□□□ -0.95
PDE4A-207ENST00000590407 TMEM263Q8WUH6 116 aaKnown RBP9.12□□□□□ -0.95
PDE4A-207ENST00000590407 TRAV12-2A0A075B6T6 113 aa9.12□□□□□ -0.95
PDE4A-207ENST00000590407 J3QLI3 93 aa9.12□□□□□ -0.95
PDE4A-207ENST00000590407 M0R2P5 195 aa9.12□□□□□ -0.95
PDE4A-207ENST00000590407 WFDC12Q8WWY7 111 aa9.12□□□□□ -0.95
PDE4A-207ENST00000590407 TRAV2A0A0B4J234 112 aa9.11□□□□□ -0.95
PDE4A-207ENST00000590407 A4D1N5 150 aa9.11□□□□□ -0.95
PDE4A-207ENST00000590407 MRPS36P82909 103 aaKnown RBP9.11□□□□□ -0.95
PDE4A-207ENST00000590407 SPINK13Q1W4C9 94 aa9.11□□□□□ -0.95
PDE4A-207ENST00000590407 TMEM95Q3KNT9 176 aa9.11□□□□□ -0.95
PDE4A-207ENST00000590407 Q5PR19 223 aa9.11□□□□□ -0.95
PDE4A-207ENST00000590407 CARD19Q96LW7 228 aa9.11□□□□□ -0.95
PDE4A-207ENST00000590407 IGHV4-59P01825 116 aa9.1□□□□□ -0.95
PDE4A-207ENST00000590407 RELNP78509 3460 aa9.1□□□□□ -0.95
PDE4A-207ENST00000590407 AKAP6Q13023 2319 aa9.1□□□□□ -0.95
PDE4A-207ENST00000590407 DEFB112Q30KQ8 113 aa9.09□□□□□ -0.95
PDE4A-207ENST00000590407 ZNF418Q8TF45 676 aaPredicted RBP9.09□□□□□ -0.95
PDE4A-207ENST00000590407 RNF183Q96D59 192 aa9.09□□□□□ -0.95
PDE4A-207ENST00000590407 UBE2E2Q96LR5 201 aa9.09□□□□□ -0.95
PDE4A-207ENST00000590407 OPRPNQ99935 248 aaPredicted RBP9.09□□□□□ -0.95
PDE4A-207ENST00000590407 SPTAN1Q13813 2472 aaKnown RBP9.09□□□□□ -0.95
PDE4A-207ENST00000590407 A0A0J9YXV3 536 aa9.09□□□□□ -0.95
PDE4A-207ENST00000590407 TMEM262E9PQX1 116 aa9.09□□□□□ -0.95
PDE4A-207ENST00000590407 EIF4EBP3O60516 100 aaPredicted RBP9.09□□□□□ -0.95
PDE4A-207ENST00000590407 LINC01356Q8N9X3 169 aa9.09□□□□□ -0.95
PDE4A-207ENST00000590407 LINC00467Q9BRT7 94 aa9.09□□□□□ -0.95
PDE4A-207ENST00000590407 ERG28Q9UKR5 140 aa9.09□□□□□ -0.95
PDE4A-207ENST00000590407 A0A0J9YXY3 114 aa9.08□□□□□ -0.96
PDE4A-207ENST00000590407 SCGB1C2P0DMR2 95 aa9.08□□□□□ -0.96
PDE4A-207ENST00000590407 SYNJ2BPP57105 145 aa9.08□□□□□ -0.96
PDE4A-207ENST00000590407 MUSTN1Q8IVN3 82 aa9.08□□□□□ -0.96
PDE4A-207ENST00000590407 FAM104AQ969W3 186 aa9.08□□□□□ -0.96
PDE4A-207ENST00000590407 SPANXDQ9BXN6 97 aa9.08□□□□□ -0.96
PDE4A-207ENST00000590407 SPANXA1Q9NS26 97 aa9.08□□□□□ -0.96
PDE4A-207ENST00000590407 SPANXCQ9NY87 97 aa9.08□□□□□ -0.96
PDE4A-207ENST00000590407 IGKV3-20P01619 116 aa9.07□□□□□ -0.96
PDE4A-207ENST00000590407 Q6ZUT4 128 aa9.07□□□□□ -0.96
PDE4A-207ENST00000590407 DEFB104AQ8WTQ1 72 aa9.07□□□□□ -0.96
PDE4A-207ENST00000590407 LITAFQ99732 161 aa9.07□□□□□ -0.96
PDE4A-207ENST00000590407 TRBV30A0A0K0K1B3 111 aa9.07□□□□□ -0.96
PDE4A-207ENST00000590407 TINCRA0A1B0GVN0 87 aa9.07□□□□□ -0.96
PDE4A-207ENST00000590407 IGHV3-30-3P0DP02 117 aa9.07□□□□□ -0.96
PDE4A-207ENST00000590407 HOXD3P31249 432 aaPredicted RBP9.07□□□□□ -0.96
PDE4A-207ENST00000590407 FHL3Q13643 280 aa9.07□□□□□ -0.96
PDE4A-207ENST00000590407 SFTA2Q6UW10 78 aa9.07□□□□□ -0.96
PDE4A-207ENST00000590407 C10orf99Q6UWK7 81 aa9.07□□□□□ -0.96
PDE4A-207ENST00000590407 ANKRD29Q8N6D5 301 aa9.07□□□□□ -0.96
PDE4A-207ENST00000590407 VPREB3Q9UKI3 123 aa9.07□□□□□ -0.96
PDE4A-207ENST00000590407 ASH1LQ9NR48 2969 aaKnown RBP9.06□□□□□ -0.96
PDE4A-207ENST00000590407 A0A096LNT2 108 aa9.06□□□□□ -0.96
PDE4A-207ENST00000590407 IGHV1-58A0A0C4DH39 117 aa9.06□□□□□ -0.96
PDE4A-207ENST00000590407 SLC25A20O43772 301 aa9.06□□□□□ -0.96
PDE4A-207ENST00000590407 FSHBP01225 129 aa9.06□□□□□ -0.96
PDE4A-207ENST00000590407 CD28P10747 220 aa9.06□□□□□ -0.96
PDE4A-207ENST00000590407 TIMM21Q9BVV7 248 aa9.06□□□□□ -0.96
PDE4A-207ENST00000590407 TIMM17BO60830 172 aa9.05□□□□□ -0.96
PDE4A-207ENST00000590407 RBMY1A1P0DJD3 496 aaKnown RBP9.05□□□□□ -0.96
PDE4A-207ENST00000590407 RBMY1CP0DJD4 496 aa9.05□□□□□ -0.96
PDE4A-207ENST00000590407 RBMY1FQ15415 496 aaKnown RBP9.05□□□□□ -0.96
PDE4A-207ENST00000590407 DNAJC30Q96LL9 226 aa9.05□□□□□ -0.96
PDE4A-207ENST00000590407 ZNF702PQ9H963 129 aa9.05□□□□□ -0.96
PDE4A-207ENST00000590407 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.05□□□□□ -0.961e-6■■■■□ 25.4
PDE4A-207ENST00000590407 H3BMM0 161 aa9.04□□□□□ -0.96
PDE4A-207ENST00000590407 SPINK8P0C7L1 97 aa9.04□□□□□ -0.96
PDE4A-207ENST00000590407 CKS1BP61024 79 aa9.04□□□□□ -0.96
PDE4A-207ENST00000590407 ZNF415Q09FC8 603 aa9.04□□□□□ -0.96
PDE4A-207ENST00000590407 ATXN8Q156A1 80 aa9.04□□□□□ -0.96
PDE4A-207ENST00000590407 TNFRSF18Q9Y5U5 241 aa9.04□□□□□ -0.96
PDE4A-207ENST00000590407 CHCHD7Q9BUK0 85 aa9.04□□□□□ -0.96
PDE4A-207ENST00000590407 C9JAW5 83 aa9.03□□□□□ -0.96
PDE4A-207ENST00000590407 RPL13AP40429 203 aaKnown RBP9.03□□□□□ -0.96
PDE4A-207ENST00000590407 XGP55808 180 aa9.03□□□□□ -0.96
PDE4A-207ENST00000590407 BEAN1Q3B7T3 259 aa9.03□□□□□ -0.96
PDE4A-207ENST00000590407 LINC01620Q4KN68 170 aa9.03□□□□□ -0.96
PDE4A-207ENST00000590407 Q6YL49 198 aa9.03□□□□□ -0.96
PDE4A-207ENST00000590407 VSIG2Q96IQ7 327 aa9.03□□□□□ -0.96
PDE4A-207ENST00000590407 RAX2Q96IS3 184 aa9.03□□□□□ -0.96
PDE4A-207ENST00000590407 CLUHP3Q96NS8 147 aa9.03□□□□□ -0.96
PDE4A-207ENST00000590407 UBE2D4Q9Y2X8 147 aa9.03□□□□□ -0.96
PDE4A-207ENST00000590407 MT-ATP8P03928 68 aa9.02□□□□□ -0.97
PDE4A-207ENST00000590407 MIAQ16674 131 aa9.02□□□□□ -0.97
PDE4A-207ENST00000590407 SPXQ9BT56 116 aa9.02□□□□□ -0.97
PDE4A-207ENST00000590407 DOPEY2Q9Y3R5 2298 aa9.02□□□□□ -0.97
PDE4A-207ENST00000590407 KNCNA6PVL3 124 aa9.01□□□□□ -0.97
PDE4A-207ENST00000590407 IGHV3-53P01767 116 aa9.01□□□□□ -0.97
PDE4A-207ENST00000590407 IFITM1P13164 125 aa9.01□□□□□ -0.97
PDE4A-207ENST00000590407 DEFB131AP59861 70 aa9.01□□□□□ -0.97
PDE4A-207ENST00000590407 ZFAND6Q6FIF0 208 aa9.01□□□□□ -0.97
PDE4A-207ENST00000590407 Q8N2B8 174 aa9.01□□□□□ -0.97
PDE4A-207ENST00000590407 YAE1D1Q9NRH1 226 aa9.01□□□□□ -0.97
PDE4A-207ENST00000590407 NDUFA12Q9UI09 145 aa9.01□□□□□ -0.97
PDE4A-207ENST00000590407 IGHV3-64A0A075B6Q5 118 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms