RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 LINC01546A6NGU7 62 aa5.54□□□□□ -1.52
SMAD4-209ENST00000589941 FBLL1A6NHQ2 334 aaKnown RBP5.54□□□□□ -1.52
SMAD4-209ENST00000589941 IGKV1-17P01599 117 aa5.54□□□□□ -1.52
SMAD4-209ENST00000589941 TRGV3P03979 118 aa5.54□□□□□ -1.52
SMAD4-209ENST00000589941 FGF6P10767 208 aa5.54□□□□□ -1.52
SMAD4-209ENST00000589941 CRIP2P52943 208 aaPredicted RBP5.54□□□□□ -1.52
SMAD4-209ENST00000589941 RIGQ13278 110 aa5.54□□□□□ -1.52
SMAD4-209ENST00000589941 PDE6HQ13956 83 aa5.54□□□□□ -1.52
SMAD4-209ENST00000589941 PRR27Q6MZM9 219 aa5.54□□□□□ -1.52
SMAD4-209ENST00000589941 SIGLEC15Q6ZMC9 328 aa5.54□□□□□ -1.52
SMAD4-209ENST00000589941 C2orf91Q6ZV80 131 aa5.54□□□□□ -1.52
SMAD4-209ENST00000589941 OR1B1Q8NGR6 318 aa5.54□□□□□ -1.52
SMAD4-209ENST00000589941 PGLYRP4Q96LB8 373 aa5.54□□□□□ -1.52
SMAD4-209ENST00000589941 MAP1LC3CQ9BXW4 147 aa5.54□□□□□ -1.52
SMAD4-209ENST00000589941 SLC25A39Q9BZJ4 359 aaPredicted RBP5.54□□□□□ -1.52
SMAD4-209ENST00000589941 A0A096LNJ9 63 aa5.53□□□□□ -1.52
SMAD4-209ENST00000589941 A0A1B0GUV1 79 aa5.53□□□□□ -1.52
SMAD4-209ENST00000589941 CHEK1O14757 476 aa5.53□□□□□ -1.52
SMAD4-209ENST00000589941 ORM2P19652 201 aa5.53□□□□□ -1.52
SMAD4-209ENST00000589941 SEC11AP67812 179 aa5.53□□□□□ -1.52
SMAD4-209ENST00000589941 DEFB114Q30KQ6 69 aa5.53□□□□□ -1.52
SMAD4-209ENST00000589941 MPV17L2Q567V2 206 aa5.53□□□□□ -1.52
SMAD4-209ENST00000589941 PSMG4Q5JS54 123 aa5.53□□□□□ -1.52
SMAD4-209ENST00000589941 TMEM61Q8N0U2 210 aa5.53□□□□□ -1.52
SMAD4-209ENST00000589941 C11orf68Q9H3H3 251 aaKnown RBP5.53□□□□□ -1.52
SMAD4-209ENST00000589941 MDFICQ9P1T7 246 aa5.53□□□□□ -1.52
SMAD4-209ENST00000589941 HSBP1L1C9JCN9 74 aa5.52□□□□□ -1.53
SMAD4-209ENST00000589941 K7EIM0 57 aa5.52□□□□□ -1.53
SMAD4-209ENST00000589941 SIVA1O15304 175 aa5.52□□□□□ -1.53
SMAD4-209ENST00000589941 CSN1S1P47710 185 aa5.52□□□□□ -1.53
SMAD4-209ENST00000589941 PSG3Q16557 428 aa5.52□□□□□ -1.53
SMAD4-209ENST00000589941 C5orf64Q2M2E5 130 aa5.52□□□□□ -1.53
SMAD4-209ENST00000589941 KLK9Q2XQG4 91 aa5.52□□□□□ -1.53
SMAD4-209ENST00000589941 OR10AG1Q8NH19 301 aa5.52□□□□□ -1.53
SMAD4-209ENST00000589941 DYNLRB2Q8TF09 96 aa5.52□□□□□ -1.53
SMAD4-209ENST00000589941 BLNKQ8WV28 456 aa5.52□□□□□ -1.53
SMAD4-209ENST00000589941 ZC2HC1AQ96GY0 325 aa5.52□□□□□ -1.53
SMAD4-209ENST00000589941 KLK9Q9UKQ9 250 aa5.52□□□□□ -1.53
SMAD4-209ENST00000589941 PSG8Q9UQ74 426 aa5.52□□□□□ -1.53
SMAD4-209ENST00000589941 MUC21A0A0G2JKD1 596 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 MUC21A0A140T8X8 626 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 NBR2O15453 112 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 NDUFA3O95167 84 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 ARMS2P0C7Q2 107 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 RPL35AP18077 110 aaKnown RBP5.51□□□□□ -1.53
SMAD4-209ENST00000589941 GPR183P32249 361 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 CRIP1P50238 77 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 APOC4P55056 127 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 COTL1Q14019 142 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 MUC21Q5SSG8 566 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 C1orf134Q5TEV5 83 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 UFSP1Q6NVU6 142 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 Q6ZTC4 211 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 GOLT1AQ6ZVE7 132 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 Q6ZVH6 145 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 PPP1R27Q86WC6 154 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 BPIFA4PQ86YQ2 179 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 BOD1L2Q8IYS8 172 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 OR4C5Q8NGB2 326 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 SRSF12Q8WXF0 261 aaKnown RBP5.51□□□□□ -1.53
SMAD4-209ENST00000589941 ZNF414Q96IQ9 312 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 CNFNQ9BYD5 112 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 KRTAP2-2Q9BYT5 123 aa5.51□□□□□ -1.53
SMAD4-209ENST00000589941 PEF1Q9UBV8 284 aaKnown RBP5.51□□□□□ -1.53
SMAD4-209ENST00000589941 TRAV8-1A0A0A6YYK1 113 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 K7EQM0 130 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 LGALS9O00182 355 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 GAGE7O76087 117 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 IGHV3-48P01763 117 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 GAGE12FP0CL80 117 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 GAGE12GP0CL81 117 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 GAGE12IP0CL82 117 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 CT45A10P0DMU9 189 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 PSG9Q00887 426 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 GAGE4Q13068 117 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 FAM104BQ5XKR9 115 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 S100A7AQ86SG5 101 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 NPBQ8NG41 125 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 FBXL15Q9H469 300 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 CST9LQ9H4G1 147 aa5.5□□□□□ -1.53
SMAD4-209ENST00000589941 OR2T8A6NH00 312 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 USP17L23D6RBM5 183 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 H3BRM9 83 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 IGLC6P0CF74 106 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 P0DMU3 169 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 FAM231AP0DMU4 169 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 FAM231CP0DMU5 169 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 HLA-DRB4P13762 266 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 XGP55808 180 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 LYZP61626 148 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 RPL36AP83881 106 aaKnown RBP5.49□□□□□ -1.53
SMAD4-209ENST00000589941 VAMP3Q15836 100 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 OCIAD2Q56VL3 154 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 TMEM97Q5BJF2 176 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 FA2HQ7L5A8 372 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 PRNTQ86SH4 94 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 EXOC3-AS1Q8N2X6 119 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 SGK494Q96LW2 274 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 TP73-AS1Q9UF72 201 aa5.49□□□□□ -1.53
SMAD4-209ENST00000589941 RPH3ALQ9UNE2 315 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms