RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-223ENST00000589266 Q6ZSN1 163 aa17.56■□□□□ 0.4
CIRBP-223ENST00000589266 SLC25A29Q8N8R3 303 aa17.56■□□□□ 0.4
CIRBP-223ENST00000589266 PHLDA1Q8WV24 401 aaPredicted RBP17.56■□□□□ 0.4
CIRBP-223ENST00000589266 K7EQD1 137 aa17.55■□□□□ 0.4
CIRBP-223ENST00000589266 PPBPP02775 128 aa17.55■□□□□ 0.4
CIRBP-223ENST00000589266 PRADC1Q9BSG0 188 aa17.55■□□□□ 0.4
CIRBP-223ENST00000589266 M0QY20 66 aa17.54■□□□□ 0.4
CIRBP-223ENST00000589266 MRPL51Q4U2R6 128 aaKnown RBP17.54■□□□□ 0.4
CIRBP-223ENST00000589266 PAX4O43316 350 aa17.53■□□□□ 0.4
CIRBP-223ENST00000589266 PPP1R17O96001 155 aa17.53■□□□□ 0.4
CIRBP-223ENST00000589266 CEMP1Q6PRD7 247 aaPredicted RBP17.53■□□□□ 0.4
CIRBP-223ENST00000589266 APCSP02743 223 aa17.52■□□□□ 0.4
CIRBP-223ENST00000589266 VSIG2Q96IQ7 327 aa17.52■□□□□ 0.4
CIRBP-223ENST00000589266 DNAJC30Q96LL9 226 aa17.52■□□□□ 0.4
CIRBP-223ENST00000589266 HECTD4Q9Y4D8 3996 aa17.52■□□□□ 0.39
CIRBP-223ENST00000589266 TRAV26-1A0A087WT03 109 aa17.51■□□□□ 0.39
CIRBP-223ENST00000589266 KIAA1109Q2LD37 5005 aa17.51■□□□□ 0.39
CIRBP-223ENST00000589266 KLK5Q9Y337 293 aaPredicted RBP17.51■□□□□ 0.39
CIRBP-223ENST00000589266 TRAPPC1Q9Y5R8 145 aa17.51■□□□□ 0.39
CIRBP-223ENST00000589266 RAB5AP20339 215 aa17.5■□□□□ 0.39
CIRBP-223ENST00000589266 CKS2P33552 79 aa17.5■□□□□ 0.39
CIRBP-223ENST00000589266 MRPL18Q9H0U6 180 aaKnown RBP17.5■□□□□ 0.39
CIRBP-223ENST00000589266 NIT2Q9NQR4 276 aa17.5■□□□□ 0.39
CIRBP-223ENST00000589266 ORMDL3Q8N138 153 aa17.49■□□□□ 0.39
CIRBP-223ENST00000589266 LAMTOR2Q9Y2Q5 125 aa17.49■□□□□ 0.39
CIRBP-223ENST00000589266 TRAV26-2A0A0B4J265 109 aa17.48■□□□□ 0.39
CIRBP-223ENST00000589266 PHOX2AO14813 284 aa17.48■□□□□ 0.39
CIRBP-223ENST00000589266 TRBV6-5A0A0K0K1A5 114 aa17.47■□□□□ 0.39
CIRBP-223ENST00000589266 D6R8Y8 96 aa17.47■□□□□ 0.39
CIRBP-223ENST00000589266 RPL36AP83881 106 aaKnown RBP17.47■□□□□ 0.39
CIRBP-223ENST00000589266 FABP9Q0Z7S8 132 aa17.47■□□□□ 0.39
CIRBP-223ENST00000589266 C15orf53Q8NAA6 179 aa17.47■□□□□ 0.39
CIRBP-223ENST00000589266 RPL36ALQ969Q0 106 aaKnown RBP17.47■□□□□ 0.39
CIRBP-223ENST00000589266 A0A0J9YY99 117 aa17.46■□□□□ 0.39
CIRBP-223ENST00000589266 GYPEP15421 78 aa17.46■□□□□ 0.39
CIRBP-223ENST00000589266 RPS10P46783 165 aaKnown RBP17.46■□□□□ 0.39
CIRBP-223ENST00000589266 SH2D6Q7Z4S9 175 aa17.46■□□□□ 0.39
CIRBP-223ENST00000589266 NEXN-AS1Q8NBZ9 246 aa17.46■□□□□ 0.39
CIRBP-223ENST00000589266 TRBV7-3A0A075B6L6 115 aa17.45■□□□□ 0.38
CIRBP-223ENST00000589266 TCTAP57738 103 aa17.45■□□□□ 0.38
CIRBP-223ENST00000589266 MRPL23Q16540 153 aaKnown RBP17.45■□□□□ 0.38
CIRBP-223ENST00000589266 NRACQ8N912 160 aa17.45■□□□□ 0.38
CIRBP-223ENST00000589266 TNFRSF18Q9Y5U5 241 aa17.45■□□□□ 0.38
CIRBP-223ENST00000589266 ICOSQ9Y6W8 199 aa17.45■□□□□ 0.38
CIRBP-223ENST00000589266 P0DMU3 169 aa17.44■□□□□ 0.38
CIRBP-223ENST00000589266 FAM231AP0DMU4 169 aa17.44■□□□□ 0.38
CIRBP-223ENST00000589266 FAM231CP0DMU5 169 aa17.44■□□□□ 0.38
CIRBP-223ENST00000589266 LINC00694P0DN24 101 aa17.44■□□□□ 0.38
CIRBP-223ENST00000589266 OR10J3Q5JRS4 329 aa17.44■□□□□ 0.38
CIRBP-223ENST00000589266 LGALS9CQ6DKI2 356 aa17.44■□□□□ 0.38
CIRBP-223ENST00000589266 PRELID3AQ96N28 172 aa17.44■□□□□ 0.38
CIRBP-223ENST00000589266 NCR2O95944 276 aa17.43■□□□□ 0.38
CIRBP-223ENST00000589266 C20orf78Q9BR46 151 aa17.43■□□□□ 0.38
CIRBP-223ENST00000589266 SMKR1H3BMG3 65 aa17.42■□□□□ 0.38
CIRBP-223ENST00000589266 GAS8-AS1O95177 125 aa17.42■□□□□ 0.38
CIRBP-223ENST00000589266 ZNRF2Q8NHG8 242 aa17.42■□□□□ 0.38
CIRBP-223ENST00000589266 RPL39LQ96EH5 51 aaKnown RBP17.42■□□□□ 0.38
CIRBP-223ENST00000589266 ST20Q9HBF5 79 aa17.42■□□□□ 0.38
CIRBP-223ENST00000589266 LOC100131303A0A0U1RQF7 123 aa17.41■□□□□ 0.38
CIRBP-223ENST00000589266 IGLL5B9A064 214 aa17.41■□□□□ 0.38
CIRBP-223ENST00000589266 TNFRSF6BO95407 300 aa17.41■□□□□ 0.38
CIRBP-223ENST00000589266 SRIP30626 198 aa17.41■□□□□ 0.38
CIRBP-223ENST00000589266 UBE2D3P61077 147 aa17.41■□□□□ 0.38
CIRBP-223ENST00000589266 UBE2D2P62837 147 aa17.41■□□□□ 0.38
CIRBP-223ENST00000589266 RPL32P62910 135 aaKnown RBP17.41■□□□□ 0.38
CIRBP-223ENST00000589266 KIAA1644Q3SXP7 199 aa17.41■□□□□ 0.38
CIRBP-223ENST00000589266 Q9UF83 564 aa17.41■□□□□ 0.38
CIRBP-223ENST00000589266 A0A096LPF7 62 aa17.4■□□□□ 0.38
CIRBP-223ENST00000589266 GAGE12JA6NER3 117 aa17.4■□□□□ 0.38
CIRBP-223ENST00000589266 GAGE1Q13065 139 aa17.4■□□□□ 0.38
CIRBP-223ENST00000589266 GAGE4Q13068 117 aa17.4■□□□□ 0.38
CIRBP-223ENST00000589266 GAGE5Q13069 117 aa17.4■□□□□ 0.38
CIRBP-223ENST00000589266 GAGE13Q4V321 117 aa17.4■□□□□ 0.38
CIRBP-223ENST00000589266 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.4■□□□□ 0.38
CIRBP-223ENST00000589266 ALKBH7Q9BT30 221 aaPredicted RBP17.4■□□□□ 0.38
CIRBP-223ENST00000589266 PRSS47A8MTI9 375 aa17.39■□□□□ 0.37
CIRBP-223ENST00000589266 NPYP01303 97 aa17.39■□□□□ 0.37
CIRBP-223ENST00000589266 TRGC2P03986 189 aa17.39■□□□□ 0.37
CIRBP-223ENST00000589266 SUMO2P61956 95 aaKnown RBP17.39■□□□□ 0.37
CIRBP-223ENST00000589266 DAZ4Q86SG3 579 aaKnown RBP17.39■□□□□ 0.37
CIRBP-223ENST00000589266 DAZ3Q9NR90 486 aaKnown RBP17.39■□□□□ 0.37
CIRBP-223ENST00000589266 NEGR1Q7Z3B1 354 aa17.38■□□□□ 0.37
CIRBP-223ENST00000589266 SDHAF1A6NFY7 115 aa17.37■□□□□ 0.37
CIRBP-223ENST00000589266 POLR2KP53803 58 aaKnown RBP17.37■□□□□ 0.37
CIRBP-223ENST00000589266 ATP6V0E2Q8NHE4 81 aa17.37■□□□□ 0.37
CIRBP-223ENST00000589266 NUDT3O95989 172 aa17.36■□□□□ 0.37
CIRBP-223ENST00000589266 TIRAPP58753 221 aa17.36■□□□□ 0.37
CIRBP-223ENST00000589266 TMEM70Q9BUB7 260 aa17.36■□□□□ 0.37
CIRBP-223ENST00000589266 TRBV27A0A0K0K1C4 114 aa17.35■□□□□ 0.37
CIRBP-223ENST00000589266 VCYO14598 125 aa17.35■□□□□ 0.37
CIRBP-223ENST00000589266 TMEM97Q5BJF2 176 aa17.35■□□□□ 0.37
CIRBP-223ENST00000589266 MAP1LC3AQ9H492 121 aa17.35■□□□□ 0.37
CIRBP-223ENST00000589266 APLNQ9ULZ1 77 aa17.35■□□□□ 0.37
CIRBP-223ENST00000589266 VPS13DQ5THJ4 4388 aa17.35■□□□□ 0.37
CIRBP-223ENST00000589266 GTSF1LQ9H1H1 148 aa17.33■□□□□ 0.36
CIRBP-223ENST00000589266 I3L3M4 83 aa17.32■□□□□ 0.36
CIRBP-223ENST00000589266 SMIM2Q9BVW6 85 aa17.32■□□□□ 0.36
CIRBP-223ENST00000589266 TCAPO15273 167 aa17.31■□□□□ 0.36
CIRBP-223ENST00000589266 PMCHP20382 165 aa17.3■□□□□ 0.36
CIRBP-223ENST00000589266 NXT2Q9NPJ8 142 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms