RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 JPT2Q9H910 190 aa14.19□□□□□ -0.14
ATG4D-208ENST00000588667 TRGV2A0A075B6R0 118 aa14.19□□□□□ -0.14
ATG4D-208ENST00000588667 A0A087WWL8 130 aa14.19□□□□□ -0.14
ATG4D-208ENST00000588667 ESDP10768 282 aa14.19□□□□□ -0.14
ATG4D-208ENST00000588667 PDZD11Q5EBL8 140 aa14.19□□□□□ -0.14
ATG4D-208ENST00000588667 MRPL16Q9NX20 251 aaKnown RBP14.19□□□□□ -0.14
ATG4D-208ENST00000588667 ALMS1Q8TCU4 4167 aa14.19□□□□□ -0.14
ATG4D-208ENST00000588667 FAM74A4Q5TZK3 123 aa14.18□□□□□ -0.14
ATG4D-208ENST00000588667 RASL10AQ92737 203 aa14.18□□□□□ -0.14
ATG4D-208ENST00000588667 F5H768 121 aa14.17□□□□□ -0.14
ATG4D-208ENST00000588667 NPYP01303 97 aa14.17□□□□□ -0.14
ATG4D-208ENST00000588667 CRYGDP07320 174 aa14.17□□□□□ -0.14
ATG4D-208ENST00000588667 LINC00310P59036 64 aa14.17□□□□□ -0.14
ATG4D-208ENST00000588667 LINC00315P59091 139 aa14.17□□□□□ -0.14
ATG4D-208ENST00000588667 APLNQ9ULZ1 77 aa14.17□□□□□ -0.14
ATG4D-208ENST00000588667 TRAV26-2A0A0B4J265 109 aa14.16□□□□□ -0.14
ATG4D-208ENST00000588667 LCE6AA0A183 80 aa14.16□□□□□ -0.14
ATG4D-208ENST00000588667 TNFRSF6BO95407 300 aa14.16□□□□□ -0.14
ATG4D-208ENST00000588667 PPP1R17O96001 155 aa14.16□□□□□ -0.14
ATG4D-208ENST00000588667 SAMD10Q9BYL1 202 aa14.16□□□□□ -0.14
ATG4D-208ENST00000588667 MAP1LC3AQ9H492 121 aa14.16□□□□□ -0.14
ATG4D-208ENST00000588667 SACSQ9NZJ4 4579 aa14.16□□□□□ -0.14
ATG4D-208ENST00000588667 DNAH1Q9P2D7 4330 aa14.16□□□□□ -0.14
ATG4D-208ENST00000588667 F5H697 171 aa14.15□□□□□ -0.14
ATG4D-208ENST00000588667 RNASEKQ6P5S7 137 aaKnown RBP14.15□□□□□ -0.14
ATG4D-208ENST00000588667 NIT1Q86X76 327 aa14.15□□□□□ -0.14
ATG4D-208ENST00000588667 PRSS3P2Q8NHM4 247 aa14.15□□□□□ -0.14
ATG4D-208ENST00000588667 CHCHD1Q96BP2 118 aaKnown RBP14.15□□□□□ -0.14
ATG4D-208ENST00000588667 NUPR1O60356 82 aa14.15□□□□□ -0.14
ATG4D-208ENST00000588667 GAS8-AS1O95177 125 aa14.15□□□□□ -0.14
ATG4D-208ENST00000588667 TMEM18Q96B42 140 aa14.15□□□□□ -0.14
ATG4D-208ENST00000588667 IFITM10A6NMD0 228 aa14.14□□□□□ -0.15
ATG4D-208ENST00000588667 RHODO00212 210 aa14.14□□□□□ -0.15
ATG4D-208ENST00000588667 HSBP1O75506 76 aa14.14□□□□□ -0.15
ATG4D-208ENST00000588667 LINC00614P0C842 121 aa14.14□□□□□ -0.15
ATG4D-208ENST00000588667 GATA1P15976 413 aaPredicted RBP14.14□□□□□ -0.15
ATG4D-208ENST00000588667 ZNF56Q15929 161 aa14.14□□□□□ -0.15
ATG4D-208ENST00000588667 NRACQ8N912 160 aa14.14□□□□□ -0.15
ATG4D-208ENST00000588667 SUMO4Q6EEV6 95 aa14.13□□□□□ -0.15
ATG4D-208ENST00000588667 FA2HQ7L5A8 372 aa14.13□□□□□ -0.15
ATG4D-208ENST00000588667 LINC00476Q8WZB0 136 aa14.13□□□□□ -0.15
ATG4D-208ENST00000588667 HIST1H2BLQ99880 126 aa14.13□□□□□ -0.15
ATG4D-208ENST00000588667 LOC389332A0A1B0GUA5 103 aa14.12□□□□□ -0.15
ATG4D-208ENST00000588667 FABP4P15090 132 aa14.12□□□□□ -0.15
ATG4D-208ENST00000588667 AKR1D1P51857 326 aa14.12□□□□□ -0.15
ATG4D-208ENST00000588667 CFAP126Q5VTH2 177 aa14.12□□□□□ -0.15
ATG4D-208ENST00000588667 NACAE9PAV3 2078 aa14.12□□□□□ -0.15
ATG4D-208ENST00000588667 RS1O15537 224 aa14.12□□□□□ -0.15
ATG4D-208ENST00000588667 C15orf53Q8NAA6 179 aa14.12□□□□□ -0.15
ATG4D-208ENST00000588667 URB1-AS1Q96HZ7 61 aa14.12□□□□□ -0.15
ATG4D-208ENST00000588667 NXT2Q9NPJ8 142 aaKnown RBP14.12□□□□□ -0.15
ATG4D-208ENST00000588667 PRSS47A8MTI9 375 aa14.11□□□□□ -0.15
ATG4D-208ENST00000588667 IFI27P40305 119 aaPredicted RBP14.11□□□□□ -0.15
ATG4D-208ENST00000588667 PACRGQ96M98 296 aaPredicted RBP14.11□□□□□ -0.15
ATG4D-208ENST00000588667 C20orf78Q9BR46 151 aa14.11□□□□□ -0.15
ATG4D-208ENST00000588667 AP5S1Q9NUS5 200 aa14.11□□□□□ -0.15
ATG4D-208ENST00000588667 H7C1H1 209 aa14.1□□□□□ -0.15
ATG4D-208ENST00000588667 PMCHP20382 165 aa14.1□□□□□ -0.15
ATG4D-208ENST00000588667 AMTP48728 403 aa14.1□□□□□ -0.15
ATG4D-208ENST00000588667 UFSP1Q6NVU6 142 aa14.1□□□□□ -0.15
ATG4D-208ENST00000588667 ZFP2Q6ZN57 461 aa14.1□□□□□ -0.15
ATG4D-208ENST00000588667 IGHV3-53P01767 116 aa14.09□□□□□ -0.15
ATG4D-208ENST00000588667 LGALS9CQ6DKI2 356 aa14.09□□□□□ -0.15
ATG4D-208ENST00000588667 OR4C5Q8NGB2 326 aa14.09□□□□□ -0.15
ATG4D-208ENST00000588667 TRAV26-1A0A087WT03 109 aa14.08□□□□□ -0.15
ATG4D-208ENST00000588667 TRAV4A0A0B4J268 109 aa14.08□□□□□ -0.15
ATG4D-208ENST00000588667 M0QY20 66 aa14.08□□□□□ -0.15
ATG4D-208ENST00000588667 SUMO2P61956 95 aaKnown RBP14.08□□□□□ -0.15
ATG4D-208ENST00000588667 RPL39LQ96EH5 51 aaKnown RBP14.08□□□□□ -0.15
ATG4D-208ENST00000588667 IGHV3-73A0A0B4J1V6 119 aa14.08□□□□□ -0.16
ATG4D-208ENST00000588667 LY6G6CO95867 125 aa14.08□□□□□ -0.16
ATG4D-208ENST00000588667 H3BNG1 76 aa14.07□□□□□ -0.16
ATG4D-208ENST00000588667 Q8N8P6 123 aa14.07□□□□□ -0.16
ATG4D-208ENST00000588667 OR10D4PQ8NGN7 298 aa14.07□□□□□ -0.16
ATG4D-208ENST00000588667 ZNF479Q96JC4 524 aa14.07□□□□□ -0.16
ATG4D-208ENST00000588667 ST20Q9HBF5 79 aa14.07□□□□□ -0.16
ATG4D-208ENST00000588667 CIDEAO60543 219 aa14.06□□□□□ -0.16
ATG4D-208ENST00000588667 FAM19A2Q8N3H0 131 aa14.06□□□□□ -0.16
ATG4D-208ENST00000588667 SMIM2Q9BVW6 85 aa14.06□□□□□ -0.16
ATG4D-208ENST00000588667 VPS13DQ5THJ4 4388 aa14.06□□□□□ -0.16
ATG4D-208ENST00000588667 A0A0J9YY99 117 aa14.05□□□□□ -0.16
ATG4D-208ENST00000588667 TRBV6-5A0A0K0K1A5 114 aa14.05□□□□□ -0.16
ATG4D-208ENST00000588667 FHL2Q14192 279 aa14.05□□□□□ -0.16
ATG4D-208ENST00000588667 NIT2Q9NQR4 276 aa14.05□□□□□ -0.16
ATG4D-208ENST00000588667 TRGV4A0A0C4DH28 118 aa14.04□□□□□ -0.16
ATG4D-208ENST00000588667 LINC01546A6NGU7 62 aa14.04□□□□□ -0.16
ATG4D-208ENST00000588667 NUDT3O95989 172 aa14.04□□□□□ -0.16
ATG4D-208ENST00000588667 P0DMU3 169 aa14.04□□□□□ -0.16
ATG4D-208ENST00000588667 FAM231AP0DMU4 169 aa14.04□□□□□ -0.16
ATG4D-208ENST00000588667 FAM231CP0DMU5 169 aa14.04□□□□□ -0.16
ATG4D-208ENST00000588667 RPL32P62910 135 aaKnown RBP14.04□□□□□ -0.16
ATG4D-208ENST00000588667 PRO0255Q9UI72 69 aa14.04□□□□□ -0.16
ATG4D-208ENST00000588667 IGLV2-18A0A075B6J9 118 aa14.04□□□□□ -0.16
ATG4D-208ENST00000588667 IGHV1-24A0A0C4DH33 117 aa14.04□□□□□ -0.16
ATG4D-208ENST00000588667 RYR2Q92736 4967 aa14.03□□□□□ -0.16
ATG4D-208ENST00000588667 VSIG2Q96IQ7 327 aa14.03□□□□□ -0.16
ATG4D-208ENST00000588667 HHLA3Q9XRX5 114 aa14.03□□□□□ -0.16
ATG4D-208ENST00000588667 K7EMI3 77 aa14.02□□□□□ -0.16
ATG4D-208ENST00000588667 PAX4O43316 350 aa14.02□□□□□ -0.16
ATG4D-208ENST00000588667 CRYBA4P53673 196 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 222.2 ms