RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 H3BVH4 76 aa9.86□□□□□ -0.83
VAPA-209ENST00000585042 LECT2O14960 151 aa9.86□□□□□ -0.83
VAPA-209ENST00000585042 Q0VG73 95 aa9.86□□□□□ -0.83
VAPA-209ENST00000585042 CENPWQ5EE01 88 aa9.86□□□□□ -0.83
VAPA-209ENST00000585042 ATRAIDQ6UW56 229 aa9.86□□□□□ -0.83
VAPA-209ENST00000585042 DERL1Q9BUN8 251 aa9.86□□□□□ -0.83
VAPA-209ENST00000585042 CXCL1P09341 107 aa9.85□□□□□ -0.83
VAPA-209ENST00000585042 KCNIP4Q6PIL6 250 aa9.85□□□□□ -0.83
VAPA-209ENST00000585042 LYPD6BQ8NI32 183 aa9.85□□□□□ -0.83
VAPA-209ENST00000585042 CHAC1Q9BUX1 264 aa9.85□□□□□ -0.83
VAPA-209ENST00000585042 TRBV7-3A0A075B6L6 115 aa9.84□□□□□ -0.83
VAPA-209ENST00000585042 IGKV2D-24A0A075B6R9 120 aa9.84□□□□□ -0.83
VAPA-209ENST00000585042 A0A087WX48 190 aa9.84□□□□□ -0.83
VAPA-209ENST00000585042 RAB19A4D1S5 217 aa9.84□□□□□ -0.83
VAPA-209ENST00000585042 TMEM250H0YL14 139 aa9.84□□□□□ -0.83
VAPA-209ENST00000585042 RPL36AP83881 106 aaKnown RBP9.84□□□□□ -0.83
VAPA-209ENST00000585042 ZFP82Q8N141 532 aa9.84□□□□□ -0.83
VAPA-209ENST00000585042 RPL36ALQ969Q0 106 aaKnown RBP9.84□□□□□ -0.83
VAPA-209ENST00000585042 EIF5A2Q9GZV4 153 aaKnown RBP9.84□□□□□ -0.83
VAPA-209ENST00000585042 KLK12Q9UKR0 248 aa9.84□□□□□ -0.83
VAPA-209ENST00000585042 XKRY2A2RUG3 117 aa9.83□□□□□ -0.84
VAPA-209ENST00000585042 RPS20P60866 119 aaKnown RBP9.83□□□□□ -0.84
VAPA-209ENST00000585042 C14orf177Q52M58 125 aa9.83□□□□□ -0.84
VAPA-209ENST00000585042 FAM74A4Q5TZK3 123 aa9.83□□□□□ -0.84
VAPA-209ENST00000585042 SCXQ7RTU7 201 aa9.83□□□□□ -0.84
VAPA-209ENST00000585042 UBE2D3P61077 147 aa9.82□□□□□ -0.84
VAPA-209ENST00000585042 UBE2D2P62837 147 aa9.82□□□□□ -0.84
VAPA-209ENST00000585042 OR10G8Q8NGN5 311 aa9.82□□□□□ -0.84
VAPA-209ENST00000585042 UBE2WQ96B02 151 aa9.82□□□□□ -0.84
VAPA-209ENST00000585042 A0A087WWL8 130 aa9.81□□□□□ -0.84
VAPA-209ENST00000585042 M0R381 172 aa9.81□□□□□ -0.84
VAPA-209ENST00000585042 NDUFS6O75380 124 aaKnown RBP9.81□□□□□ -0.84
VAPA-209ENST00000585042 GHRHP01286 108 aa9.81□□□□□ -0.84
VAPA-209ENST00000585042 P01737 135 aa9.81□□□□□ -0.84
VAPA-209ENST00000585042 RAB4BP61018 213 aa9.81□□□□□ -0.84
VAPA-209ENST00000585042 SERTAD4-AS1Q5TG53 156 aa9.81□□□□□ -0.84
VAPA-209ENST00000585042 TEX261Q6UWH6 196 aa9.81□□□□□ -0.84
VAPA-209ENST00000585042 DNAH8Q96JB1 4490 aa9.81□□□□□ -0.84
VAPA-209ENST00000585042 OXTP01178 125 aa9.8□□□□□ -0.84
VAPA-209ENST00000585042 IGLV2-8P01709 118 aa9.8□□□□□ -0.84
VAPA-209ENST00000585042 CEBPGP53567 150 aa9.8□□□□□ -0.84
VAPA-209ENST00000585042 PKIAP61925 76 aa9.8□□□□□ -0.84
VAPA-209ENST00000585042 RPL19P84098 196 aaKnown RBP9.8□□□□□ -0.84
VAPA-209ENST00000585042 SPANXN1Q5VSR9 72 aa9.8□□□□□ -0.84
VAPA-209ENST00000585042 OR2D3Q8NGH3 330 aa9.8□□□□□ -0.84
VAPA-209ENST00000585042 FAM210AQ96ND0 272 aa9.8□□□□□ -0.84
VAPA-209ENST00000585042 TRBV6-8A0A0A6YYG3 113 aa9.79□□□□□ -0.84
VAPA-209ENST00000585042 OR5AL1P0C617 328 aa9.79□□□□□ -0.84
VAPA-209ENST00000585042 LINC01620Q4KN68 170 aa9.79□□□□□ -0.84
VAPA-209ENST00000585042 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.79□□□□□ -0.84
VAPA-209ENST00000585042 CIRBP-AS1Q8TBR5 109 aa9.79□□□□□ -0.84
VAPA-209ENST00000585042 DNAJC30Q96LL9 226 aa9.79□□□□□ -0.84
VAPA-209ENST00000585042 SSBP4Q9BWG4 385 aaPredicted RBP9.79□□□□□ -0.84
VAPA-209ENST00000585042 C1orf43Q9BWL3 253 aa9.79□□□□□ -0.84
VAPA-209ENST00000585042 TRBV20OR9-2A0A075B6H5 130 aa9.78□□□□□ -0.84
VAPA-209ENST00000585042 C19orf71A6NCJ1 209 aa9.78□□□□□ -0.84
VAPA-209ENST00000585042 TMEM262E9PQX1 116 aa9.78□□□□□ -0.84
VAPA-209ENST00000585042 SNAI2O43623 268 aa9.78□□□□□ -0.84
VAPA-209ENST00000585042 KRTAP10-4P60372 401 aaPredicted RBP9.78□□□□□ -0.84
VAPA-209ENST00000585042 LCE2CQ5TA81 110 aa9.78□□□□□ -0.84
VAPA-209ENST00000585042 F2Z2F3 143 aa9.77□□□□□ -0.85
VAPA-209ENST00000585042 SMIM17P0DL12 118 aa9.77□□□□□ -0.85
VAPA-209ENST00000585042 TMEM97Q5BJF2 176 aa9.77□□□□□ -0.85
VAPA-209ENST00000585042 ENHOQ6UWT2 76 aa9.77□□□□□ -0.85
VAPA-209ENST00000585042 FER1L6-AS1Q8NA97 138 aa9.77□□□□□ -0.85
VAPA-209ENST00000585042 OCC1Q8TAD7 63 aa9.77□□□□□ -0.85
VAPA-209ENST00000585042 CACNG7P62955 275 aa9.76□□□□□ -0.85
VAPA-209ENST00000585042 PEA15Q15121 130 aa9.76□□□□□ -0.85
VAPA-209ENST00000585042 DGAT2L7PQ6IED9 249 aa9.76□□□□□ -0.85
VAPA-209ENST00000585042 OR10AG1Q8NH19 301 aa9.76□□□□□ -0.85
VAPA-209ENST00000585042 SMIM7Q9BQ49 75 aa9.76□□□□□ -0.85
VAPA-209ENST00000585042 TPPP3Q9BW30 176 aa9.76□□□□□ -0.85
VAPA-209ENST00000585042 CRPP02741 224 aa9.75□□□□□ -0.85
VAPA-209ENST00000585042 RAB14P61106 215 aa9.75□□□□□ -0.85
VAPA-209ENST00000585042 MIAQ16674 131 aa9.75□□□□□ -0.85
VAPA-209ENST00000585042 NEXN-AS1Q8NBZ9 246 aa9.75□□□□□ -0.85
VAPA-209ENST00000585042 NUDT10Q8NFP7 164 aa9.75□□□□□ -0.85
VAPA-209ENST00000585042 NUDT11Q96G61 164 aa9.75□□□□□ -0.85
VAPA-209ENST00000585042 AP1S3Q96PC3 154 aa9.75□□□□□ -0.85
VAPA-209ENST00000585042 SMDT1Q9H4I9 107 aa9.75□□□□□ -0.85
VAPA-209ENST00000585042 RPP21Q9H633 154 aaKnown RBP9.75□□□□□ -0.85
VAPA-209ENST00000585042 ZNF727A8MUV8 499 aa9.74□□□□□ -0.85
VAPA-209ENST00000585042 FAM74A3Q4VXF1 159 aa9.74□□□□□ -0.85
VAPA-209ENST00000585042 ANGP03950 147 aaKnown RBP9.73□□□□□ -0.85
VAPA-209ENST00000585042 SRP19P09132 144 aaKnown RBP9.73□□□□□ -0.85
VAPA-209ENST00000585042 IGLC6P0CF74 106 aa9.73□□□□□ -0.85
VAPA-209ENST00000585042 GZMBP10144 247 aa9.73□□□□□ -0.85
VAPA-209ENST00000585042 SSTP61278 116 aa9.73□□□□□ -0.85
VAPA-209ENST00000585042 ZNF56Q15929 161 aa9.73□□□□□ -0.85
VAPA-209ENST00000585042 MPV17L2Q567V2 206 aa9.73□□□□□ -0.85
VAPA-209ENST00000585042 C15orf54Q8N8G6 183 aa9.73□□□□□ -0.85
VAPA-209ENST00000585042 MUC21A0A0G2JKD1 596 aa9.72□□□□□ -0.85
VAPA-209ENST00000585042 MUC21A0A140T8X8 626 aa9.72□□□□□ -0.85
VAPA-209ENST00000585042 F5H697 171 aa9.72□□□□□ -0.85
VAPA-209ENST00000585042 K7EN84 100 aa9.72□□□□□ -0.85
VAPA-209ENST00000585042 GATCO43716 136 aaKnown RBP9.72□□□□□ -0.85
VAPA-209ENST00000585042 WDR73Q6P4I2 378 aa9.72□□□□□ -0.85
VAPA-209ENST00000585042 FAM231DQ6ZW35 169 aa9.72□□□□□ -0.85
VAPA-209ENST00000585042 CHCHD5Q9BSY4 110 aa9.72□□□□□ -0.85
VAPA-209ENST00000585042 RNASE7Q9H1E1 156 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms