RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 MRPL51Q4U2R6 128 aaKnown RBP12.92□□□□□ -0.34
NDEL1-217ENST00000583683 COL7A1Q02388 2944 aa12.92□□□□□ -0.34
NDEL1-217ENST00000583683 RS1O15537 224 aa12.92□□□□□ -0.34
NDEL1-217ENST00000583683 UFSP1Q6NVU6 142 aa12.92□□□□□ -0.34
NDEL1-217ENST00000583683 C11orf68Q9H3H3 251 aaKnown RBP12.91□□□□□ -0.34
NDEL1-217ENST00000583683 UQCR10Q9UDW1 63 aa12.91□□□□□ -0.34
NDEL1-217ENST00000583683 CELA1Q9UNI1 258 aa12.91□□□□□ -0.34
NDEL1-217ENST00000583683 TRGV2A0A075B6R0 118 aa12.9□□□□□ -0.34
NDEL1-217ENST00000583683 MGPP08493 103 aa12.9□□□□□ -0.34
NDEL1-217ENST00000583683 DEFB130BP0DP73 79 aa12.9□□□□□ -0.34
NDEL1-217ENST00000583683 DEFB130AP0DP74 79 aa12.9□□□□□ -0.34
NDEL1-217ENST00000583683 NIT1Q86X76 327 aa12.9□□□□□ -0.34
NDEL1-217ENST00000583683 ZMAT4Q9H898 229 aa12.9□□□□□ -0.34
NDEL1-217ENST00000583683 CBY1Q9Y3M2 126 aa12.9□□□□□ -0.34
NDEL1-217ENST00000583683 TRAV4A0A0B4J268 109 aa12.9□□□□□ -0.34
NDEL1-217ENST00000583683 IGLC3P0DOY3 106 aa12.9□□□□□ -0.34
NDEL1-217ENST00000583683 KRTDAPP60985 99 aa12.9□□□□□ -0.34
NDEL1-217ENST00000583683 SPATA45Q537H7 98 aa12.9□□□□□ -0.34
NDEL1-217ENST00000583683 OR4C5Q8NGB2 326 aa12.9□□□□□ -0.34
NDEL1-217ENST00000583683 C18orf15Q96N68 181 aa12.9□□□□□ -0.34
NDEL1-217ENST00000583683 IGHV3-73A0A0B4J1V6 119 aa12.89□□□□□ -0.35
NDEL1-217ENST00000583683 TRAV26-2A0A0B4J265 109 aa12.89□□□□□ -0.35
NDEL1-217ENST00000583683 SPART-AS1P0CW21 52 aa12.89□□□□□ -0.35
NDEL1-217ENST00000583683 AMTP48728 403 aa12.89□□□□□ -0.35
NDEL1-217ENST00000583683 ZNF479Q96JC4 524 aa12.89□□□□□ -0.35
NDEL1-217ENST00000583683 A0A0J9YWU9 116 aa12.88□□□□□ -0.35
NDEL1-217ENST00000583683 D6R8Y8 96 aa12.88□□□□□ -0.35
NDEL1-217ENST00000583683 GAS8-AS1O95177 125 aa12.88□□□□□ -0.35
NDEL1-217ENST00000583683 ZFP2Q6ZN57 461 aa12.88□□□□□ -0.35
NDEL1-217ENST00000583683 HUWE1Q7Z6Z7 4374 aaKnown RBP12.88□□□□□ -0.35
NDEL1-217ENST00000583683 SMKR1H3BMG3 65 aa12.88□□□□□ -0.35
NDEL1-217ENST00000583683 RHODO00212 210 aa12.88□□□□□ -0.35
NDEL1-217ENST00000583683 IGHV3-53P01767 116 aa12.88□□□□□ -0.35
NDEL1-217ENST00000583683 ZNF56Q15929 161 aa12.88□□□□□ -0.35
NDEL1-217ENST00000583683 U3KQK5 164 aa12.88□□□□□ -0.35
NDEL1-217ENST00000583683 F5H697 171 aa12.87□□□□□ -0.35
NDEL1-217ENST00000583683 NCR2O95944 276 aa12.87□□□□□ -0.35
NDEL1-217ENST00000583683 C3orf79P0CE67 100 aa12.87□□□□□ -0.35
NDEL1-217ENST00000583683 CKS2P33552 79 aa12.87□□□□□ -0.35
NDEL1-217ENST00000583683 SUMO4Q6EEV6 95 aa12.87□□□□□ -0.35
NDEL1-217ENST00000583683 ORMDL3Q8N138 153 aa12.87□□□□□ -0.35
NDEL1-217ENST00000583683 MRAP2Q96G30 205 aa12.87□□□□□ -0.35
NDEL1-217ENST00000583683 ALKBH7Q9BT30 221 aaPredicted RBP12.87□□□□□ -0.35
NDEL1-217ENST00000583683 DNAH9Q9NYC9 4486 aa12.86□□□□□ -0.35
NDEL1-217ENST00000583683 SRIP30626 198 aa12.86□□□□□ -0.35
NDEL1-217ENST00000583683 Q6ZSN1 163 aa12.86□□□□□ -0.35
NDEL1-217ENST00000583683 TEX48A0A1B0GUV7 120 aa12.85□□□□□ -0.35
NDEL1-217ENST00000583683 PPBPP02775 128 aa12.85□□□□□ -0.35
NDEL1-217ENST00000583683 GATA1P15976 413 aaPredicted RBP12.85□□□□□ -0.35
NDEL1-217ENST00000583683 DAD1P61803 113 aa12.85□□□□□ -0.35
NDEL1-217ENST00000583683 BATFQ16520 125 aa12.85□□□□□ -0.35
NDEL1-217ENST00000583683 PRKDCP78527 4128 aaKnown RBP12.85□□□□□ -0.35
NDEL1-217ENST00000583683 PMCHP20382 165 aa12.85□□□□□ -0.35
NDEL1-217ENST00000583683 STPG4Q8N801 248 aa12.85□□□□□ -0.35
NDEL1-217ENST00000583683 ORAOV1Q8WV07 137 aa12.85□□□□□ -0.35
NDEL1-217ENST00000583683 MRPS16Q9Y3D3 137 aaKnown RBP12.85□□□□□ -0.35
NDEL1-217ENST00000583683 PRELID3AQ96N28 172 aa12.84□□□□□ -0.35
NDEL1-217ENST00000583683 LAMTOR2Q9Y2Q5 125 aa12.84□□□□□ -0.35
NDEL1-217ENST00000583683 C20orf202A1L168 122 aa12.83□□□□□ -0.35
NDEL1-217ENST00000583683 M0QY20 66 aa12.83□□□□□ -0.35
NDEL1-217ENST00000583683 CIDEAO60543 219 aa12.83□□□□□ -0.35
NDEL1-217ENST00000583683 HNRNPA3P51991 378 aaKnown RBP12.83□□□□□ -0.35
NDEL1-217ENST00000583683 PMCHL1Q16048 86 aa12.83□□□□□ -0.35
NDEL1-217ENST00000583683 NRACQ8N912 160 aa12.83□□□□□ -0.35
NDEL1-217ENST00000583683 C18orf32Q8TCD1 76 aa12.83□□□□□ -0.35
NDEL1-217ENST00000583683 NPYP01303 97 aa12.83□□□□□ -0.36
NDEL1-217ENST00000583683 C12orf74Q32Q52 190 aa12.83□□□□□ -0.36
NDEL1-217ENST00000583683 EDA2RQ9HAV5 297 aa12.83□□□□□ -0.36
NDEL1-217ENST00000583683 NHLRC4P0CG21 123 aaPredicted RBP12.82□□□□□ -0.36
NDEL1-217ENST00000583683 FHL2Q14192 279 aa12.82□□□□□ -0.36
NDEL1-217ENST00000583683 Q6ZN92 141 aa12.82□□□□□ -0.36
NDEL1-217ENST00000583683 RPL39LQ96EH5 51 aaKnown RBP12.82□□□□□ -0.36
NDEL1-217ENST00000583683 TNFRSF6BO95407 300 aa12.81□□□□□ -0.36
NDEL1-217ENST00000583683 TRGV4A0A0C4DH28 118 aa12.81□□□□□ -0.36
NDEL1-217ENST00000583683 Q9UF83 564 aa12.81□□□□□ -0.36
NDEL1-217ENST00000583683 P0DMU3 169 aa12.8□□□□□ -0.36
NDEL1-217ENST00000583683 FAM231AP0DMU4 169 aa12.8□□□□□ -0.36
NDEL1-217ENST00000583683 FAM231CP0DMU5 169 aa12.8□□□□□ -0.36
NDEL1-217ENST00000583683 SLC25A29Q8N8R3 303 aa12.8□□□□□ -0.36
NDEL1-217ENST00000583683 H7C1H1 209 aa12.79□□□□□ -0.36
NDEL1-217ENST00000583683 ATP5G1P05496 136 aa12.79□□□□□ -0.36
NDEL1-217ENST00000583683 C11orf45Q8TAV5 145 aa12.79□□□□□ -0.36
NDEL1-217ENST00000583683 TRAV9-2A0A087WT02 112 aa12.78□□□□□ -0.36
NDEL1-217ENST00000583683 FAM19A2Q8N3H0 131 aa12.78□□□□□ -0.36
NDEL1-217ENST00000583683 TRBV6-4A0A1B0GX49 114 aa12.78□□□□□ -0.36
NDEL1-217ENST00000583683 PPP1R17O96001 155 aa12.78□□□□□ -0.36
NDEL1-217ENST00000583683 HHLA3Q9XRX5 114 aa12.78□□□□□ -0.36
NDEL1-217ENST00000583683 K7EQD1 137 aa12.77□□□□□ -0.37
NDEL1-217ENST00000583683 NANOS2P60321 138 aaKnown RBP12.77□□□□□ -0.37
NDEL1-217ENST00000583683 Q6ZTC4 211 aa12.77□□□□□ -0.37
NDEL1-217ENST00000583683 STAB2Q8WWQ8 2551 aa12.77□□□□□ -0.37
NDEL1-217ENST00000583683 SUMO2P61956 95 aaKnown RBP12.76□□□□□ -0.37
NDEL1-217ENST00000583683 FBN3Q75N90 2809 aa12.76□□□□□ -0.37
NDEL1-217ENST00000583683 TRBV6-5A0A0K0K1A5 114 aa12.76□□□□□ -0.37
NDEL1-217ENST00000583683 LOC389332A0A1B0GUA5 103 aa12.76□□□□□ -0.37
NDEL1-217ENST00000583683 PRSS47A8MTI9 375 aa12.76□□□□□ -0.37
NDEL1-217ENST00000583683 NEXN-AS1Q8NBZ9 246 aa12.76□□□□□ -0.37
NDEL1-217ENST00000583683 C20orf78Q9BR46 151 aa12.76□□□□□ -0.37
NDEL1-217ENST00000583683 MAP1LC3AQ9H492 121 aa12.76□□□□□ -0.37
NDEL1-217ENST00000583683 COX11Q9Y6N1 276 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms