RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 TRBV19A0A075B6N1 114 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 TRAV12-2A0A075B6T6 113 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 A0A0J9YXV3 536 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 C9orf170A2RU37 121 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 C7orf71A4D174 169 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 RBAKDNA6NC62 111 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 NAP1L6A6NFF2 107 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 IBA57-AS1B1ANH7 110 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 FAM25AB3EWG3 89 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 FAM25CB3EWG5 89 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 FAM25GB3EWG6 89 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 F5H768 121 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 H3BQ15 152 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 MPDU1O75352 247 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 NDUFB6O95139 128 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 OXTP01178 125 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 ORM1P02763 201 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 RLN2P04090 185 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 PRM2P04554 102 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 IL5P05113 134 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 OR5G3P0C626 314 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 OR4E1P0C645 316 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 HIST1H1EP10412 219 aaKnown RBP1.24□□□□□ -2.21
COPS3-217ENST00000583160 ORM2P19652 201 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 FAUP35544 74 aaKnown RBP1.24□□□□□ -2.21
COPS3-217ENST00000583160 CRYBA4P53673 196 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 EMP1P54849 157 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 FXYD7P58549 80 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 AP3S2P59780 193 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 PPP1R1AQ13522 171 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 ZNF266Q14584 549 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 SPCS2Q15005 226 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 ZNF726P1Q15940 193 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 MRPL23Q16540 153 aaKnown RBP1.24□□□□□ -2.21
COPS3-217ENST00000583160 SCGB2B2Q4G0G5 96 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 LINC01556Q5JQF7 62 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 Q5VSD8 79 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 LYPD5Q6UWN5 251 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 Q6ZTI0 123 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 LINC00305Q7Z4B0 112 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 C12orf45Q8N5I9 185 aaPredicted RBP1.24□□□□□ -2.21
COPS3-217ENST00000583160 EIF4E3Q8N5X7 224 aaKnown RBP1.24□□□□□ -2.21
COPS3-217ENST00000583160 OR10P1Q8NGE3 313 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 RNASE11Q8TAA1 199 aaKnown RBP1.24□□□□□ -2.21
COPS3-217ENST00000583160 MITD1Q8WV92 249 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 DIRAS2Q96HU8 199 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 LINC00052Q96N35 136 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 PFDN5Q99471 154 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 MGST2Q99735 147 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 C7orf50Q9BRJ6 194 aaKnown RBP1.24□□□□□ -2.21
COPS3-217ENST00000583160 TMEM208Q9BTX3 173 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 PBDC1Q9BVG4 233 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 TMEM147Q9BVK8 224 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 MRPS26Q9BYN8 205 aaKnown RBP1.24□□□□□ -2.21
COPS3-217ENST00000583160 SRRQ9GZT4 340 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 NAA50Q9GZZ1 169 aaKnown RBP1.24□□□□□ -2.21
COPS3-217ENST00000583160 ARV1Q9H2C2 271 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 NOP10Q9NPE3 64 aaKnown RBP1.24□□□□□ -2.21
COPS3-217ENST00000583160 ZNF492Q9P255 531 aa1.24□□□□□ -2.21
COPS3-217ENST00000583160 RCL1Q9Y2P8 373 aaKnown RBP1.24□□□□□ -2.21
COPS3-217ENST00000583160 CSDC2Q9Y534 153 aaKnown RBP1.24□□□□□ -2.21
COPS3-217ENST00000583160 SRRM2Q9UQ35 2752 aaKnown RBP1.24□□□□□ -2.21
COPS3-217ENST00000583160 TRAV4A0A0B4J268 109 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 LINC00854A0A1B0GVQ3 168 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 TRBV6-4A0A1B0GX49 114 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 FABP12A6NFH5 140 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 SLC17A3O00476 420 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 RGS5O15539 181 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 LINC00694P0DN24 101 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 DEFB130BP0DP73 79 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 DEFB130AP0DP74 79 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 S100A11P31949 105 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 FUSP35637 526 aaKnown RBP eCLIP1.23□□□□□ -2.21
COPS3-217ENST00000583160 LSM3P62310 102 aaKnown RBP1.23□□□□□ -2.21
COPS3-217ENST00000583160 HIST1H1AQ02539 215 aaPredicted RBP1.23□□□□□ -2.21
COPS3-217ENST00000583160 IL18Q14116 193 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 ATP6V1FQ16864 119 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 SPANXN5Q5MJ07 72 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 TMED4Q7Z7H5 227 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 TOMM5Q8N4H5 51 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 ZNF738Q8NE65 137 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 SUN5Q8TC36 379 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 DEFB104AQ8WTQ1 72 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 FAM167A-AS1Q96KT0 104 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 TXNDC17Q9BRA2 123 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 PARD6GQ9BYG4 376 aaPredicted RBP1.23□□□□□ -2.21
COPS3-217ENST00000583160 AGPAT4-IT1Q9H0P7 198 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 SH3BGRL3Q9H299 93 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 LYRM2Q9NU23 88 aaPredicted RBP1.23□□□□□ -2.21
COPS3-217ENST00000583160 SLC39A9Q9NUM3 307 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 PSENENQ9NZ42 101 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 HHLA3Q9XRX5 114 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 FUT9Q9Y231 359 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 ICOSQ9Y6W8 199 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 LY96Q9Y6Y9 160 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 VPS13BQ7Z7G8 4022 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 DNAH8Q96JB1 4490 aa1.23□□□□□ -2.21
COPS3-217ENST00000583160 LRP1Q07954 4544 aaKnown RBP1.22□□□□□ -2.21
COPS3-217ENST00000583160 SMIM26A0A096LP01 95 aa1.22□□□□□ -2.21
COPS3-217ENST00000583160 TRAV5A0A0B4J249 113 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms