RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 ZNF674Q2M3X9 581 aa5.45□□□□□ -1.54
GGA3-212ENST00000582376 SAPCD1Q5SSQ6 148 aa5.45□□□□□ -1.54
GGA3-212ENST00000582376 PHF5AQ7RTV0 110 aaKnown RBP5.45□□□□□ -1.54
GGA3-212ENST00000582376 OR5C1Q8NGR4 320 aa5.45□□□□□ -1.54
GGA3-212ENST00000582376 DEDD2Q8WXF8 326 aa5.45□□□□□ -1.54
GGA3-212ENST00000582376 GRIFINA4D1Z8 144 aa5.44□□□□□ -1.54
GGA3-212ENST00000582376 FAM25EA8MYX2 175 aa5.44□□□□□ -1.54
GGA3-212ENST00000582376 C17orf112F2Z3M2 114 aa5.44□□□□□ -1.54
GGA3-212ENST00000582376 EIF3GO75821 320 aaKnown RBP eCLIP5.44□□□□□ -1.54
GGA3-212ENST00000582376 C9orf116Q5BN46 136 aaPredicted RBP5.44□□□□□ -1.54
GGA3-212ENST00000582376 FLVCR2Q9UPI3 526 aa5.44□□□□□ -1.54
GGA3-212ENST00000582376 A0A087WZ39 114 aa5.43□□□□□ -1.54
GGA3-212ENST00000582376 IGKV3OR2-268A0A0C4DH90 116 aa5.43□□□□□ -1.54
GGA3-212ENST00000582376 LOC107984640A0A0U1RRK4 108 aa5.43□□□□□ -1.54
GGA3-212ENST00000582376 M0R036 132 aa5.43□□□□□ -1.54
GGA3-212ENST00000582376 PQLC2Q6ZP29 291 aa5.43□□□□□ -1.54
GGA3-212ENST00000582376 C5orf17Q8NAS9 161 aa5.43□□□□□ -1.54
GGA3-212ENST00000582376 CHCHD10Q8WYQ3 142 aaPredicted RBP5.43□□□□□ -1.54
GGA3-212ENST00000582376 LINC00526Q96FQ7 95 aa5.43□□□□□ -1.54
GGA3-212ENST00000582376 TMEM243Q9BU79 118 aa5.43□□□□□ -1.54
GGA3-212ENST00000582376 WDR61Q9GZS3 305 aaKnown RBP5.43□□□□□ -1.54
GGA3-212ENST00000582376 KRBOX1C9JBD0 128 aa5.42□□□□□ -1.54
GGA3-212ENST00000582376 NDUFB6O95139 128 aa5.42□□□□□ -1.54
GGA3-212ENST00000582376 SYCNQ0VAF6 134 aa5.42□□□□□ -1.54
GGA3-212ENST00000582376 RETNLBQ9BQ08 111 aa5.42□□□□□ -1.54
GGA3-212ENST00000582376 F5H697 171 aa5.41□□□□□ -1.54
GGA3-212ENST00000582376 UBE2L6O14933 153 aa5.41□□□□□ -1.54
GGA3-212ENST00000582376 FGF6P10767 208 aa5.41□□□□□ -1.54
GGA3-212ENST00000582376 NHLH2Q02577 135 aa5.41□□□□□ -1.54
GGA3-212ENST00000582376 PYDC2Q56P42 97 aa5.41□□□□□ -1.54
GGA3-212ENST00000582376 IGLV7-46A0A075B6I9 117 aa5.4□□□□□ -1.54
GGA3-212ENST00000582376 IGHV1-58A0A0C4DH39 117 aa5.4□□□□□ -1.54
GGA3-212ENST00000582376 TMBIM6P55061 237 aa5.4□□□□□ -1.54
GGA3-212ENST00000582376 FAM162BQ5T6X4 162 aa5.4□□□□□ -1.54
GGA3-212ENST00000582376 SDHCQ99643 169 aaPredicted RBP5.4□□□□□ -1.54
GGA3-212ENST00000582376 RPP21Q9H633 154 aaKnown RBP5.4□□□□□ -1.54
GGA3-212ENST00000582376 EPDR1Q9UM22 224 aa5.4□□□□□ -1.54
GGA3-212ENST00000582376 ARL2-SNX15V9GYD0 113 aa5.4□□□□□ -1.54
GGA3-212ENST00000582376 TMSB15BA0A087X1C1 80 aa5.39□□□□□ -1.55
GGA3-212ENST00000582376 A0A1W2PPV4 95 aa5.39□□□□□ -1.55
GGA3-212ENST00000582376 ZNF561-AS1K7EIQ3 104 aa5.39□□□□□ -1.55
GGA3-212ENST00000582376 CFC1BP0CG36 223 aa5.39□□□□□ -1.55
GGA3-212ENST00000582376 BCL2P10415 239 aa5.39□□□□□ -1.55
GGA3-212ENST00000582376 FOXI1Q12951 378 aa5.39□□□□□ -1.55
GGA3-212ENST00000582376 RAB32Q13637 225 aa5.39□□□□□ -1.55
GGA3-212ENST00000582376 SPCS2Q15005 226 aa5.39□□□□□ -1.55
GGA3-212ENST00000582376 TSKUQ8WUA8 353 aa5.39□□□□□ -1.55
GGA3-212ENST00000582376 ISOC2Q96AB3 205 aa5.39□□□□□ -1.55
GGA3-212ENST00000582376 TRAV34A0A0B4J273 112 aa5.38□□□□□ -1.55
GGA3-212ENST00000582376 H3BMQ9 156 aa5.38□□□□□ -1.55
GGA3-212ENST00000582376 SH2D1AO60880 128 aa5.38□□□□□ -1.55
GGA3-212ENST00000582376 SUMO1P63165 101 aaKnown RBP5.38□□□□□ -1.55
GGA3-212ENST00000582376 KRTAP11-1Q8IUC1 163 aa5.38□□□□□ -1.55
GGA3-212ENST00000582376 SSBP4Q9BWG4 385 aaPredicted RBP5.38□□□□□ -1.55
GGA3-212ENST00000582376 NAP1L6A6NFF2 107 aa5.37□□□□□ -1.55
GGA3-212ENST00000582376 HMGB3O15347 200 aaKnown RBP5.37□□□□□ -1.55
GGA3-212ENST00000582376 CAMPP49913 170 aa5.37□□□□□ -1.55
GGA3-212ENST00000582376 CRIP1P50238 77 aa5.37□□□□□ -1.55
GGA3-212ENST00000582376 RPL18AQ02543 176 aaKnown RBP5.37□□□□□ -1.55
GGA3-212ENST00000582376 LINC01559Q495D7 138 aa5.37□□□□□ -1.55
GGA3-212ENST00000582376 ASB16-AS1Q495Z4 193 aa5.37□□□□□ -1.55
GGA3-212ENST00000582376 EIF5AL1Q6IS14 154 aaKnown RBP5.37□□□□□ -1.55
GGA3-212ENST00000582376 TYMSOSQ8TAI1 123 aa5.37□□□□□ -1.55
GGA3-212ENST00000582376 ZNF471Q9BX82 626 aaPredicted RBP5.37□□□□□ -1.55
GGA3-212ENST00000582376 KRTAP4-1Q9BYQ7 146 aa5.37□□□□□ -1.55
GGA3-212ENST00000582376 A6NHS1 94 aa5.36□□□□□ -1.55
GGA3-212ENST00000582376 APOMO95445 188 aa5.36□□□□□ -1.55
GGA3-212ENST00000582376 ARL14EPLP0DKL9 152 aa5.36□□□□□ -1.55
GGA3-212ENST00000582376 RPL12P30050 165 aaKnown RBP5.36□□□□□ -1.55
GGA3-212ENST00000582376 IL15RAQ13261 267 aa5.36□□□□□ -1.55
GGA3-212ENST00000582376 LINC00173Q6ZV60 143 aa5.36□□□□□ -1.55
GGA3-212ENST00000582376 OR10AG1Q8NH19 301 aa5.36□□□□□ -1.55
GGA3-212ENST00000582376 RBM38Q9H0Z9 239 aaKnown RBP5.36□□□□□ -1.55
GGA3-212ENST00000582376 MED28Q9H204 178 aa5.36□□□□□ -1.55
GGA3-212ENST00000582376 IGLV4-69A0A075B6H9 119 aa5.35□□□□□ -1.55
GGA3-212ENST00000582376 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.35□□□□□ -1.55
GGA3-212ENST00000582376 ATP6V1G2O95670 118 aa5.35□□□□□ -1.55
GGA3-212ENST00000582376 SMIM17P0DL12 118 aa5.35□□□□□ -1.55
GGA3-212ENST00000582376 XCL1P47992 114 aa5.35□□□□□ -1.55
GGA3-212ENST00000582376 MEF2BQ02080 365 aaPredicted RBP5.35□□□□□ -1.55
GGA3-212ENST00000582376 Q86TA4 180 aa5.35□□□□□ -1.55
GGA3-212ENST00000582376 SCGB1C1Q8TD33 95 aa5.35□□□□□ -1.55
GGA3-212ENST00000582376 PGLYRP4Q96LB8 373 aa5.35□□□□□ -1.55
GGA3-212ENST00000582376 PPDPFQ9H3Y8 114 aa5.35□□□□□ -1.55
GGA3-212ENST00000582376 A0A087X002 238 aa5.34□□□□□ -1.55
GGA3-212ENST00000582376 NKX2-5P52952 324 aaPredicted RBP5.34□□□□□ -1.55
GGA3-212ENST00000582376 SPANXN1Q5VSR9 72 aa5.34□□□□□ -1.55
GGA3-212ENST00000582376 AMMECR1LQ6DCA0 310 aa5.34□□□□□ -1.55
GGA3-212ENST00000582376 NUP35Q8NFH5 326 aa5.34□□□□□ -1.55
GGA3-212ENST00000582376 V9GYH0 126 aa5.34□□□□□ -1.55
GGA3-212ENST00000582376 M0QY20 66 aa5.33□□□□□ -1.56
GGA3-212ENST00000582376 CCL25O15444 150 aa5.33□□□□□ -1.56
GGA3-212ENST00000582376 LORP23490 312 aaPredicted RBP5.33□□□□□ -1.56
GGA3-212ENST00000582376 GCHFRP30047 84 aa5.33□□□□□ -1.56
GGA3-212ENST00000582376 UBE2BP63146 152 aa5.33□□□□□ -1.56
GGA3-212ENST00000582376 COTL1Q14019 142 aa5.33□□□□□ -1.56
GGA3-212ENST00000582376 LCE2CQ5TA81 110 aa5.33□□□□□ -1.56
GGA3-212ENST00000582376 COX8CQ7Z4L0 72 aa5.33□□□□□ -1.56
GGA3-212ENST00000582376 CAMK2N2Q96S95 79 aa5.33□□□□□ -1.56
GGA3-212ENST00000582376 MUC21A0A140T8X8 626 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms