RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 TMEM88Q6PEY1 159 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 ATRAIDQ6UW56 229 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 PRADC1Q9BSG0 188 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 MRPL16Q9NX20 251 aaKnown RBP6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 PRO0255Q9UI72 69 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 F5H697 171 aa6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 K7EMI3 77 aa6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 IGHV3-53P01767 116 aa6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 APCSP02743 223 aa6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 CRYGDP07320 174 aa6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 EVI2AP22794 236 aa6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 ZNF56Q15929 161 aa6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 TMEM97Q5BJF2 176 aa6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 Q6ZR54 194 aa6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 CBLN2Q8IUK8 224 aa6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 ORMDL3Q8N138 153 aa6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 C14orf178Q8N769 122 aaPredicted RBP6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 YPEL4Q96NS1 127 aa6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 HHLA3Q9XRX5 114 aa6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 TRAPPC1Q9Y5R8 145 aa6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 KIF25-AS1Q9Y6Z4 181 aa6.14□□□□□ -1.43
PDLIM1P3-201ENST00000582370 NACAE9PAV3 2078 aa6.13□□□□□ -1.43
PDLIM1P3-201ENST00000582370 RAB5AP20339 215 aa6.13□□□□□ -1.43
PDLIM1P3-201ENST00000582370 G0S2P27469 103 aa6.13□□□□□ -1.43
PDLIM1P3-201ENST00000582370 CKS2P33552 79 aa6.13□□□□□ -1.43
PDLIM1P3-201ENST00000582370 FAM74A4Q5TZK3 123 aa6.13□□□□□ -1.43
PDLIM1P3-201ENST00000582370 UFSP1Q6NVU6 142 aa6.13□□□□□ -1.43
PDLIM1P3-201ENST00000582370 TMEM136Q6ZRR5 245 aa6.13□□□□□ -1.43
PDLIM1P3-201ENST00000582370 C15orf53Q8NAA6 179 aa6.13□□□□□ -1.43
PDLIM1P3-201ENST00000582370 C20orf78Q9BR46 151 aa6.13□□□□□ -1.43
PDLIM1P3-201ENST00000582370 TRAV26-1A0A087WT03 109 aa6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 TGIF2-C20orf24A0A0A6YYL0 155 aa6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 LINC01549A6NIU2 74 aa6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 COLCA2A8K830 154 aa6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 EPM2AB3EWF7 344 aa6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 DEFB4AO15263 64 aa6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 PRM2P04554 102 aa6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 GATA1P15976 413 aaPredicted RBP6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 RAB4AP20338 218 aa6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 RPL36AP83881 106 aaKnown RBP6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 C12orf74Q32Q52 190 aa6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 C1orf134Q5TEV5 83 aa6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 Q6ZTC4 211 aa6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 DAZ4Q86SG3 579 aaKnown RBP6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 RPL36ALQ969Q0 106 aaKnown RBP6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 NIT2Q9NQR4 276 aa6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 DAZ3Q9NR90 486 aaKnown RBP6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 MSRB1Q9NZV6 116 aa6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 TNFRSF18Q9Y5U5 241 aa6.12□□□□□ -1.43
PDLIM1P3-201ENST00000582370 TRBV7-3A0A075B6L6 115 aa6.11□□□□□ -1.43
PDLIM1P3-201ENST00000582370 A0A087WWL8 130 aa6.11□□□□□ -1.43
PDLIM1P3-201ENST00000582370 DEFB131BA0A096LNP1 70 aa6.11□□□□□ -1.43
PDLIM1P3-201ENST00000582370 TRBV6-5A0A0K0K1A5 114 aa6.11□□□□□ -1.43
PDLIM1P3-201ENST00000582370 K7EQD1 137 aa6.11□□□□□ -1.43
PDLIM1P3-201ENST00000582370 MGPP08493 103 aa6.11□□□□□ -1.43
PDLIM1P3-201ENST00000582370 INAFM2P0DMQ5 153 aa6.11□□□□□ -1.43
PDLIM1P3-201ENST00000582370 RPS10P46783 165 aaKnown RBP6.11□□□□□ -1.43
PDLIM1P3-201ENST00000582370 RAB5BP61020 215 aa6.11□□□□□ -1.43
PDLIM1P3-201ENST00000582370 RPL32P62910 135 aaKnown RBP6.11□□□□□ -1.43
PDLIM1P3-201ENST00000582370 FHL2Q14192 279 aa6.11□□□□□ -1.43
PDLIM1P3-201ENST00000582370 AMN1Q8IY45 258 aa6.11□□□□□ -1.43
PDLIM1P3-201ENST00000582370 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
PDLIM1P3-201ENST00000582370 HMCN2Q8NDA2 5059 aa6.11□□□□□ -1.43
PDLIM1P3-201ENST00000582370 IGLV2-18A0A075B6J9 118 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 MUC21A0A0G2JKD1 596 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 MUC21A0A140T8X8 626 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 PRSS47A8MTI9 375 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 F5H768 121 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 M0QY20 66 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 PAX4O43316 350 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 CRYBA4P53673 196 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 LINC00315P59091 139 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 SSTP61278 116 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 PKIAP61925 76 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 SMAGPQ0VAQ4 97 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 FABP9Q0Z7S8 132 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 MRPL23Q16540 153 aaKnown RBP6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 SLC25A29Q8N8R3 303 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 ZNF479Q96JC4 524 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 ST20Q9HBF5 79 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 CELA1Q9UNI1 258 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 VPS13BQ7Z7G8 4022 aa6.1□□□□□ -1.43
PDLIM1P3-201ENST00000582370 VCYO14598 125 aa6.09□□□□□ -1.43
PDLIM1P3-201ENST00000582370 NCR2O95944 276 aa6.09□□□□□ -1.43
PDLIM1P3-201ENST00000582370 PMCHP20382 165 aa6.09□□□□□ -1.43
PDLIM1P3-201ENST00000582370 TNP2Q05952 138 aa6.09□□□□□ -1.43
PDLIM1P3-201ENST00000582370 MRPL51Q4U2R6 128 aaKnown RBP6.09□□□□□ -1.43
PDLIM1P3-201ENST00000582370 OR10J3Q5JRS4 329 aa6.09□□□□□ -1.43
PDLIM1P3-201ENST00000582370 SUMO4Q6EEV6 95 aa6.09□□□□□ -1.43
PDLIM1P3-201ENST00000582370 UBE2DNLQ8IWF7 75 aa6.09□□□□□ -1.43
PDLIM1P3-201ENST00000582370 RNF185Q96GF1 192 aa6.09□□□□□ -1.43
PDLIM1P3-201ENST00000582370 PRELID3AQ96N28 172 aa6.09□□□□□ -1.43
PDLIM1P3-201ENST00000582370 KIR2DL4Q99706 377 aa6.09□□□□□ -1.43
PDLIM1P3-201ENST00000582370 SAMD10Q9BYL1 202 aa6.09□□□□□ -1.43
PDLIM1P3-201ENST00000582370 MAP1LC3AQ9H492 121 aa6.09□□□□□ -1.43
PDLIM1P3-201ENST00000582370 NXT2Q9NPJ8 142 aaKnown RBP6.09□□□□□ -1.43
PDLIM1P3-201ENST00000582370 ICOSQ9Y6W8 199 aa6.09□□□□□ -1.43
PDLIM1P3-201ENST00000582370 C1orf196B1AJZ1 125 aa6.08□□□□□ -1.44
PDLIM1P3-201ENST00000582370 D6R8Y8 96 aa6.08□□□□□ -1.44
PDLIM1P3-201ENST00000582370 SRIP30626 198 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms