RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 TSSC4Q9Y5U2 329 aaPredicted RBP5.76□□□□□ -1.49
RFFL-207ENST00000580569 IGHV1OR15-1A0A075B7D0 117 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 TRAV26-2A0A0B4J265 109 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 C20orf202A1L168 122 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 GAGE12BA1L429 117 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 GAGE12HA6NDE8 117 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 OR4C46A6NHA9 309 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 KNCNA6PVL3 124 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 IGKV3-20P01619 116 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 HBDP02042 147 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 IGLC3P0DOY3 106 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 IGLL1P15814 213 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 S100A4P26447 101 aaKnown RBP5.75□□□□□ -1.49
RFFL-207ENST00000580569 FCER1GP30273 86 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 ZNF124Q15973 351 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 ATOH7Q8N100 152 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 WFDC9Q8NEX5 89 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 SPAG8Q99932 426 aaPredicted RBP5.75□□□□□ -1.49
RFFL-207ENST00000580569 B9D2Q9BPU9 175 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 MAP1LC3CQ9BXW4 147 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 KRTAP17-1Q9BYP8 105 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 MDFICQ9P1T7 246 aa5.75□□□□□ -1.49
RFFL-207ENST00000580569 HUWE1Q7Z6Z7 4374 aaKnown RBP5.74□□□□□ -1.49
RFFL-207ENST00000580569 C3orf84H3BNL1 204 aa5.74□□□□□ -1.49
RFFL-207ENST00000580569 CD7P09564 240 aa5.74□□□□□ -1.49
RFFL-207ENST00000580569 FXYD7P58549 80 aa5.74□□□□□ -1.49
RFFL-207ENST00000580569 RPL32P62910 135 aaKnown RBP5.74□□□□□ -1.49
RFFL-207ENST00000580569 LGALS9BQ3B8N2 356 aa5.74□□□□□ -1.49
RFFL-207ENST00000580569 ODF3L2Q3SX64 289 aa5.74□□□□□ -1.49
RFFL-207ENST00000580569 LGALS9CQ6DKI2 356 aa5.74□□□□□ -1.49
RFFL-207ENST00000580569 C14orf178Q8N769 122 aaPredicted RBP5.74□□□□□ -1.49
RFFL-207ENST00000580569 DYNLRB2Q8TF09 96 aa5.74□□□□□ -1.49
RFFL-207ENST00000580569 C20orf78Q9BR46 151 aa5.74□□□□□ -1.49
RFFL-207ENST00000580569 LINC00467Q9BRT7 94 aa5.74□□□□□ -1.49
RFFL-207ENST00000580569 JPT2Q9H910 190 aa5.74□□□□□ -1.49
RFFL-207ENST00000580569 TIMM8BQ9Y5J9 83 aaPredicted RBP5.74□□□□□ -1.49
RFFL-207ENST00000580569 CRYGDP07320 174 aa5.73□□□□□ -1.49
RFFL-207ENST00000580569 Q6ZSN1 163 aa5.73□□□□□ -1.49
RFFL-207ENST00000580569 MRPL52Q86TS9 123 aaKnown RBP5.73□□□□□ -1.49
RFFL-207ENST00000580569 PTH2Q96A98 100 aa5.73□□□□□ -1.49
RFFL-207ENST00000580569 IFI27L1Q96BM0 104 aa5.73□□□□□ -1.49
RFFL-207ENST00000580569 RPL39LQ96EH5 51 aaKnown RBP5.73□□□□□ -1.49
RFFL-207ENST00000580569 AP1S3Q96PC3 154 aa5.73□□□□□ -1.49
RFFL-207ENST00000580569 C2orf88Q9BSF0 95 aa5.73□□□□□ -1.49
RFFL-207ENST00000580569 MCRIP2Q9BUT9 160 aaKnown RBP5.73□□□□□ -1.49
RFFL-207ENST00000580569 SMIM2Q9BVW6 85 aa5.73□□□□□ -1.49
RFFL-207ENST00000580569 SNHG12Q9BXW3 62 aa5.73□□□□□ -1.49
RFFL-207ENST00000580569 HYDINQ4G0P3 5121 aa5.73□□□□□ -1.49
RFFL-207ENST00000580569 hDV102S1A0JD36 115 aa5.72□□□□□ -1.49
RFFL-207ENST00000580569 USP17L23D6RBM5 183 aa5.72□□□□□ -1.49
RFFL-207ENST00000580569 K7EMI3 77 aa5.72□□□□□ -1.49
RFFL-207ENST00000580569 POLR2KP53803 58 aaKnown RBP5.72□□□□□ -1.49
RFFL-207ENST00000580569 LAGE3Q14657 143 aa5.72□□□□□ -1.49
RFFL-207ENST00000580569 MORN3Q6PF18 240 aaPredicted RBP5.72□□□□□ -1.49
RFFL-207ENST00000580569 ZNF705AQ6ZN79 300 aaPredicted RBP5.72□□□□□ -1.49
RFFL-207ENST00000580569 NDUFA11Q86Y39 141 aa5.72□□□□□ -1.49
RFFL-207ENST00000580569 ST20Q9HBF5 79 aa5.72□□□□□ -1.49
RFFL-207ENST00000580569 UQCR10Q9UDW1 63 aa5.72□□□□□ -1.49
RFFL-207ENST00000580569 STARD9Q9P2P6 4700 aa5.71□□□□□ -1.49
RFFL-207ENST00000580569 TRBV6-5A0A0K0K1A5 114 aa5.71□□□□□ -1.5
RFFL-207ENST00000580569 TCAPO15273 167 aa5.71□□□□□ -1.5
RFFL-207ENST00000580569 IGLV1-51P01701 117 aa5.71□□□□□ -1.5
RFFL-207ENST00000580569 NHLRC4P0CG21 123 aaPredicted RBP5.71□□□□□ -1.5
RFFL-207ENST00000580569 EGFEM1PQ0D2K5 195 aa5.71□□□□□ -1.5
RFFL-207ENST00000580569 LBHQ53QV2 105 aaPredicted RBP5.71□□□□□ -1.5
RFFL-207ENST00000580569 DEFB121Q5J5C9 76 aa5.71□□□□□ -1.5
RFFL-207ENST00000580569 PIK3CD-AS1Q5SR53 167 aa5.71□□□□□ -1.5
RFFL-207ENST00000580569 SUMO4Q6EEV6 95 aa5.71□□□□□ -1.5
RFFL-207ENST00000580569 TRPT1Q86TN4 253 aaKnown RBP5.71□□□□□ -1.5
RFFL-207ENST00000580569 FAM110AQ9BQ89 295 aa5.71□□□□□ -1.5
RFFL-207ENST00000580569 PMCHL2Q9BQD1 86 aa5.71□□□□□ -1.5
RFFL-207ENST00000580569 EDA2RQ9HAV5 297 aa5.71□□□□□ -1.5
RFFL-207ENST00000580569 CBY3A6NI87 242 aa5.7□□□□□ -1.5
RFFL-207ENST00000580569 M0QY20 66 aa5.7□□□□□ -1.5
RFFL-207ENST00000580569 PPP1R17O96001 155 aa5.7□□□□□ -1.5
RFFL-207ENST00000580569 MGPP08493 103 aa5.7□□□□□ -1.5
RFFL-207ENST00000580569 NPSP0C0P6 89 aa5.7□□□□□ -1.5
RFFL-207ENST00000580569 SMIM17P0DL12 118 aa5.7□□□□□ -1.5
RFFL-207ENST00000580569 UFSP1Q6NVU6 142 aa5.7□□□□□ -1.5
RFFL-207ENST00000580569 C11orf72Q8NBR9 251 aa5.7□□□□□ -1.5
RFFL-207ENST00000580569 SYT8Q8NBV8 401 aa5.7□□□□□ -1.5
RFFL-207ENST00000580569 MRPS16Q9Y3D3 137 aaKnown RBP5.7□□□□□ -1.5
RFFL-207ENST00000580569 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
RFFL-207ENST00000580569 M0R143 59 aa5.69□□□□□ -1.5
RFFL-207ENST00000580569 PRM2P04554 102 aa5.69□□□□□ -1.5
RFFL-207ENST00000580569 GIG44P09565 113 aaPredicted RBP5.69□□□□□ -1.5
RFFL-207ENST00000580569 KRTAP10-11P60412 298 aa5.69□□□□□ -1.5
RFFL-207ENST00000580569 NSUN5P1Q3KNT7 163 aa5.69□□□□□ -1.5
RFFL-207ENST00000580569 C1orf158Q8N1D5 194 aa5.69□□□□□ -1.5
RFFL-207ENST00000580569 IL17DQ8TAD2 202 aa5.69□□□□□ -1.5
RFFL-207ENST00000580569 TOMM6Q96B49 74 aa5.69□□□□□ -1.5
RFFL-207ENST00000580569 DKK2Q9UBU2 259 aa5.69□□□□□ -1.5
RFFL-207ENST00000580569 GOLT1BQ9Y3E0 138 aa5.69□□□□□ -1.5
RFFL-207ENST00000580569 A0A0A0MQY5 61 aa5.68□□□□□ -1.5
RFFL-207ENST00000580569 TRBV27A0A0K0K1C4 114 aa5.68□□□□□ -1.5
RFFL-207ENST00000580569 H0Y8G0 127 aa5.68□□□□□ -1.5
RFFL-207ENST00000580569 ATP5LO75964 103 aa5.68□□□□□ -1.5
RFFL-207ENST00000580569 FGF6P10767 208 aa5.68□□□□□ -1.5
RFFL-207ENST00000580569 CMC4P56277 68 aaPredicted RBP5.68□□□□□ -1.5
RFFL-207ENST00000580569 ZNF876PQ49A33 203 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms