RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 KLHL30-AS1Q8NEE0 82 aa7.8□□□□□ -1.16
TOP3A-209ENST00000580095 CYSLTR1Q9Y271 337 aa7.8□□□□□ -1.16
TOP3A-209ENST00000580095 TP53TG1Q9Y2A0 90 aa7.8□□□□□ -1.16
TOP3A-209ENST00000580095 ITPR3Q14573 2671 aa7.8□□□□□ -1.16
TOP3A-209ENST00000580095 IGHV3-73A0A0B4J1V6 119 aa7.8□□□□□ -1.16
TOP3A-209ENST00000580095 SAMD5Q5TGI4 173 aa7.8□□□□□ -1.16
TOP3A-209ENST00000580095 NEXN-AS1Q8NBZ9 246 aa7.8□□□□□ -1.16
TOP3A-209ENST00000580095 HIST1H4GQ99525 98 aa7.8□□□□□ -1.16
TOP3A-209ENST00000580095 OPRPNQ99935 248 aaPredicted RBP7.8□□□□□ -1.16
TOP3A-209ENST00000580095 CSDC2Q9Y534 153 aaKnown RBP7.8□□□□□ -1.16
TOP3A-209ENST00000580095 KIF25-AS1Q9Y6Z4 181 aa7.8□□□□□ -1.16
TOP3A-209ENST00000580095 FLNAP21333 2647 aaKnown RBP7.8□□□□□ -1.16
TOP3A-209ENST00000580095 PLNP26678 52 aa7.79□□□□□ -1.16
TOP3A-209ENST00000580095 KNCNA6PVL3 124 aa7.79□□□□□ -1.16
TOP3A-209ENST00000580095 CCDC179H3BU77 68 aa7.79□□□□□ -1.16
TOP3A-209ENST00000580095 HOXA3O43365 443 aaPredicted RBP7.79□□□□□ -1.16
TOP3A-209ENST00000580095 HOXD3P31249 432 aaPredicted RBP7.79□□□□□ -1.16
TOP3A-209ENST00000580095 SFTA2Q6UW10 78 aa7.79□□□□□ -1.16
TOP3A-209ENST00000580095 Q6ZUT4 128 aa7.79□□□□□ -1.16
TOP3A-209ENST00000580095 CEND1Q8N111 149 aa7.79□□□□□ -1.16
TOP3A-209ENST00000580095 TSHBP01222 138 aa7.79□□□□□ -1.16
TOP3A-209ENST00000580095 ZNF56Q15929 161 aa7.79□□□□□ -1.16
TOP3A-209ENST00000580095 APRG1Q8IVJ8 170 aa7.79□□□□□ -1.16
TOP3A-209ENST00000580095 SDHAF1A6NFY7 115 aa7.78□□□□□ -1.16
TOP3A-209ENST00000580095 HLA-DRB4P13762 266 aa7.78□□□□□ -1.16
TOP3A-209ENST00000580095 SLURP1P55000 103 aa7.78□□□□□ -1.16
TOP3A-209ENST00000580095 KHDC1LQ5JSQ8 128 aa7.78□□□□□ -1.16
TOP3A-209ENST00000580095 PRADC1Q9BSG0 188 aa7.78□□□□□ -1.16
TOP3A-209ENST00000580095 HLA-DRB4X5D2U9 266 aa7.78□□□□□ -1.16
TOP3A-209ENST00000580095 A0A0J9YX75 114 aa7.78□□□□□ -1.16
TOP3A-209ENST00000580095 K7EMT4 169 aa7.78□□□□□ -1.16
TOP3A-209ENST00000580095 CRYGDP07320 174 aa7.78□□□□□ -1.16
TOP3A-209ENST00000580095 SNRPD3P62318 126 aaKnown RBP7.78□□□□□ -1.16
TOP3A-209ENST00000580095 PTH2Q96A98 100 aa7.78□□□□□ -1.16
TOP3A-209ENST00000580095 AKAP9Q99996 3911 aa7.78□□□□□ -1.16
TOP3A-209ENST00000580095 A0A096LNT2 108 aa7.77□□□□□ -1.17
TOP3A-209ENST00000580095 WIPF1O43516 503 aa7.77□□□□□ -1.17
TOP3A-209ENST00000580095 SLC25A16P16260 332 aa7.77□□□□□ -1.17
TOP3A-209ENST00000580095 AMTNQ6UX39 209 aa7.77□□□□□ -1.17
TOP3A-209ENST00000580095 ZFP2Q6ZN57 461 aa7.77□□□□□ -1.17
TOP3A-209ENST00000580095 SYT8Q8NBV8 401 aa7.77□□□□□ -1.17
TOP3A-209ENST00000580095 PLEKHB2Q96CS7 222 aa7.77□□□□□ -1.17
TOP3A-209ENST00000580095 IGHV3-16A0A0C4DH30 117 aa7.77□□□□□ -1.17
TOP3A-209ENST00000580095 C11orf86A6NJI1 115 aa7.77□□□□□ -1.17
TOP3A-209ENST00000580095 C11orf44Q8N8P7 122 aa7.77□□□□□ -1.17
TOP3A-209ENST00000580095 PHLDA1Q8WV24 401 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-209ENST00000580095 HIGD1BQ9P298 99 aa7.77□□□□□ -1.17
TOP3A-209ENST00000580095 F8W1H4 67 aa7.76□□□□□ -1.17
TOP3A-209ENST00000580095 K7EQG2 157 aa7.76□□□□□ -1.17
TOP3A-209ENST00000580095 P0DMU3 169 aa7.76□□□□□ -1.17
TOP3A-209ENST00000580095 FAM231AP0DMU4 169 aa7.76□□□□□ -1.17
TOP3A-209ENST00000580095 FAM231CP0DMU5 169 aa7.76□□□□□ -1.17
TOP3A-209ENST00000580095 ZNF843Q8N446 348 aa7.76□□□□□ -1.17
TOP3A-209ENST00000580095 Q9UF83 564 aa7.76□□□□□ -1.17
TOP3A-209ENST00000580095 MYMXA0A1B0GTQ4 84 aa7.76□□□□□ -1.17
TOP3A-209ENST00000580095 RBMY1A1P0DJD3 496 aaKnown RBP7.76□□□□□ -1.17
TOP3A-209ENST00000580095 RBMY1CP0DJD4 496 aa7.76□□□□□ -1.17
TOP3A-209ENST00000580095 PROK1P58294 105 aa7.76□□□□□ -1.17
TOP3A-209ENST00000580095 RBMY1FQ15415 496 aaKnown RBP7.76□□□□□ -1.17
TOP3A-209ENST00000580095 ZNF876PQ49A33 203 aa7.76□□□□□ -1.17
TOP3A-209ENST00000580095 ZNF702PQ9H963 129 aa7.76□□□□□ -1.17
TOP3A-209ENST00000580095 IGHV3-64A0A075B6Q5 118 aa7.75□□□□□ -1.17
TOP3A-209ENST00000580095 TRAV12-1A0A0B4J245 112 aa7.75□□□□□ -1.17
TOP3A-209ENST00000580095 ZNF815PA8K554 130 aa7.75□□□□□ -1.17
TOP3A-209ENST00000580095 LGALS1P09382 135 aaKnown RBP7.75□□□□□ -1.17
TOP3A-209ENST00000580095 COX6B1P14854 86 aa7.75□□□□□ -1.17
TOP3A-209ENST00000580095 MORN3Q6PF18 240 aaPredicted RBP7.75□□□□□ -1.17
TOP3A-209ENST00000580095 NACAE9PAV3 2078 aa7.75□□□□□ -1.17
TOP3A-209ENST00000580095 NXPH4O95158 308 aa7.75□□□□□ -1.17
TOP3A-209ENST00000580095 POLR2KP53803 58 aaKnown RBP7.75□□□□□ -1.17
TOP3A-209ENST00000580095 SCGB1D4Q6XE38 83 aa7.75□□□□□ -1.17
TOP3A-209ENST00000580095 MED14OSP0DP75 135 aa7.75□□□□□ -1.17
TOP3A-209ENST00000580095 DEFB131AP59861 70 aa7.75□□□□□ -1.17
TOP3A-209ENST00000580095 C12orf74Q32Q52 190 aa7.75□□□□□ -1.17
TOP3A-209ENST00000580095 TMEM170BQ5T4T1 132 aa7.75□□□□□ -1.17
TOP3A-209ENST00000580095 KIR2DL4Q99706 377 aa7.75□□□□□ -1.17
TOP3A-209ENST00000580095 TENM4Q6N022 2769 aa7.74□□□□□ -1.17
TOP3A-209ENST00000580095 IGLV4-69A0A075B6H9 119 aa7.74□□□□□ -1.17
TOP3A-209ENST00000580095 IGHV1OR15-1A0A075B7D0 117 aa7.74□□□□□ -1.17
TOP3A-209ENST00000580095 GAGE12JA6NER3 117 aa7.74□□□□□ -1.17
TOP3A-209ENST00000580095 GAGE7O76087 117 aa7.74□□□□□ -1.17
TOP3A-209ENST00000580095 GAGE12FP0CL80 117 aa7.74□□□□□ -1.17
TOP3A-209ENST00000580095 GAGE12GP0CL81 117 aa7.74□□□□□ -1.17
TOP3A-209ENST00000580095 GAGE12IP0CL82 117 aa7.74□□□□□ -1.17
TOP3A-209ENST00000580095 GAGE4Q13068 117 aa7.74□□□□□ -1.17
TOP3A-209ENST00000580095 PRO0461Q9UI25 63 aa7.74□□□□□ -1.17
TOP3A-209ENST00000580095 IGIPA6NJ69 53 aa7.74□□□□□ -1.17
TOP3A-209ENST00000580095 IGHV4-31P0DP07 118 aa7.74□□□□□ -1.17
TOP3A-209ENST00000580095 ITPR2Q14571 2701 aa7.73□□□□□ -1.17
TOP3A-209ENST00000580095 NOTCH2Q04721 2471 aa7.73□□□□□ -1.17
TOP3A-209ENST00000580095 IGLL5B9A064 214 aa7.73□□□□□ -1.17
TOP3A-209ENST00000580095 H3BMG7 143 aa7.73□□□□□ -1.17
TOP3A-209ENST00000580095 M0QY20 66 aa7.73□□□□□ -1.17
TOP3A-209ENST00000580095 VCYO14598 125 aa7.73□□□□□ -1.17
TOP3A-209ENST00000580095 HIST2H2BCQ6DN03 193 aa7.73□□□□□ -1.17
TOP3A-209ENST00000580095 DSCR9P59020 149 aa7.73□□□□□ -1.17
TOP3A-209ENST00000580095 TSPEAR-AS2P59090 65 aa7.73□□□□□ -1.17
TOP3A-209ENST00000580095 RNASE13Q5GAN3 156 aaKnown RBP7.73□□□□□ -1.17
TOP3A-209ENST00000580095 ZNRF2Q8NHG8 242 aa7.73□□□□□ -1.17
TOP3A-209ENST00000580095 C9orf85Q96MD7 179 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms