RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 LYRM2Q9NU23 88 aaPredicted RBP6.41□□□□□ -1.38
GGA3-206ENST00000578773 V9GYH0 126 aa6.41□□□□□ -1.38
GGA3-206ENST00000578773 FLGP20930 4061 aaPredicted RBP6.4□□□□□ -1.38
GGA3-206ENST00000578773 B4DEV8 164 aa6.4□□□□□ -1.38
GGA3-206ENST00000578773 PVALBP20472 110 aaPredicted RBP6.4□□□□□ -1.38
GGA3-206ENST00000578773 SULT1A2P50226 295 aa6.4□□□□□ -1.38
GGA3-206ENST00000578773 DEFA3P59666 94 aa6.4□□□□□ -1.38
GGA3-206ENST00000578773 ATP6V1FQ16864 119 aa6.4□□□□□ -1.38
GGA3-206ENST00000578773 AQP10Q96PS8 301 aa6.4□□□□□ -1.38
GGA3-206ENST00000578773 SYNE2Q8WXH0 6885 aaKnown RBP6.4□□□□□ -1.39
GGA3-206ENST00000578773 A0A087WZ39 114 aa6.39□□□□□ -1.39
GGA3-206ENST00000578773 IGHV1-24A0A0C4DH33 117 aa6.39□□□□□ -1.39
GGA3-206ENST00000578773 FAM168BA1KXE4 195 aa6.39□□□□□ -1.39
GGA3-206ENST00000578773 KRBOX1C9JBD0 128 aa6.39□□□□□ -1.39
GGA3-206ENST00000578773 EIF5AP63241 154 aaKnown RBP6.39□□□□□ -1.39
GGA3-206ENST00000578773 NHLH2Q02577 135 aa6.39□□□□□ -1.39
GGA3-206ENST00000578773 FOXI1Q12951 378 aa6.39□□□□□ -1.39
GGA3-206ENST00000578773 DEDD2Q8WXF8 326 aa6.39□□□□□ -1.39
GGA3-206ENST00000578773 CHCHD10Q8WYQ3 142 aaPredicted RBP6.39□□□□□ -1.39
GGA3-206ENST00000578773 TMSB15BA0A087X1C1 80 aa6.38□□□□□ -1.39
GGA3-206ENST00000578773 HMGB3O15347 200 aaKnown RBP6.38□□□□□ -1.39
GGA3-206ENST00000578773 TCRAP04437 139 aa6.38□□□□□ -1.39
GGA3-206ENST00000578773 CRIP1P50238 77 aa6.38□□□□□ -1.39
GGA3-206ENST00000578773 RAB4BP61018 213 aa6.38□□□□□ -1.39
GGA3-206ENST00000578773 FLI1Q01543 452 aaPredicted RBP6.38□□□□□ -1.39
GGA3-206ENST00000578773 ASB16-AS1Q495Z4 193 aa6.38□□□□□ -1.39
GGA3-206ENST00000578773 ZFP69Q49AA0 526 aa6.38□□□□□ -1.39
GGA3-206ENST00000578773 FAM74A1Q5RGS3 127 aa6.38□□□□□ -1.39
GGA3-206ENST00000578773 OR5C1Q8NGR4 320 aa6.38□□□□□ -1.39
GGA3-206ENST00000578773 ZNF471Q9BX82 626 aaPredicted RBP6.38□□□□□ -1.39
GGA3-206ENST00000578773 TRAV34A0A0B4J273 112 aa6.37□□□□□ -1.39
GGA3-206ENST00000578773 A0A1B0GUV1 79 aa6.37□□□□□ -1.39
GGA3-206ENST00000578773 RAB32Q13637 225 aa6.37□□□□□ -1.39
GGA3-206ENST00000578773 KHDC3LQ587J8 217 aa6.37□□□□□ -1.39
GGA3-206ENST00000578773 DNLZQ5SXM8 178 aa6.37□□□□□ -1.39
GGA3-206ENST00000578773 MLST8Q9BVC4 326 aa6.37□□□□□ -1.39
GGA3-206ENST00000578773 LOC107984640A0A0U1RRK4 108 aa6.36□□□□□ -1.39
GGA3-206ENST00000578773 NAP1L6A6NFF2 107 aa6.36□□□□□ -1.39
GGA3-206ENST00000578773 SYCNQ0VAF6 134 aa6.36□□□□□ -1.39
GGA3-206ENST00000578773 CARHSP1Q9Y2V2 147 aaKnown RBP6.36□□□□□ -1.39
GGA3-206ENST00000578773 MACF1Q9UPN3 7388 aaKnown RBP6.36□□□□□ -1.39
GGA3-206ENST00000578773 MUC21A0A140T8X8 626 aa6.35□□□□□ -1.39
GGA3-206ENST00000578773 H3BMQ9 156 aa6.35□□□□□ -1.39
GGA3-206ENST00000578773 CFC1BP0CG36 223 aa6.35□□□□□ -1.39
GGA3-206ENST00000578773 TPT1P13693 172 aaKnown RBP6.35□□□□□ -1.39
GGA3-206ENST00000578773 BTCP35070 178 aa6.35□□□□□ -1.39
GGA3-206ENST00000578773 TMBIM6P55061 237 aa6.35□□□□□ -1.39
GGA3-206ENST00000578773 TMEM97Q5BJF2 176 aa6.35□□□□□ -1.39
GGA3-206ENST00000578773 ZFP82Q8N141 532 aa6.35□□□□□ -1.39
GGA3-206ENST00000578773 TMEM243Q9BU79 118 aa6.35□□□□□ -1.39
GGA3-206ENST00000578773 MRPS26Q9BYN8 205 aaKnown RBP6.35□□□□□ -1.39
GGA3-206ENST00000578773 WDR61Q9GZS3 305 aaKnown RBP6.35□□□□□ -1.39
GGA3-206ENST00000578773 C17orf112F2Z3M2 114 aa6.34□□□□□ -1.39
GGA3-206ENST00000578773 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.34□□□□□ -1.39
GGA3-206ENST00000578773 SH2D1AO60880 128 aa6.34□□□□□ -1.39
GGA3-206ENST00000578773 S100A5P33763 92 aa6.34□□□□□ -1.39
GGA3-206ENST00000578773 TAS2R45P59539 299 aa6.34□□□□□ -1.39
GGA3-206ENST00000578773 MEF2BQ02080 365 aaPredicted RBP6.34□□□□□ -1.39
GGA3-206ENST00000578773 ZNF674Q2M3X9 581 aa6.34□□□□□ -1.39
GGA3-206ENST00000578773 TRIQKQ629K1 86 aa6.34□□□□□ -1.39
GGA3-206ENST00000578773 KRTAP7-1Q8IUC3 87 aa6.34□□□□□ -1.39
GGA3-206ENST00000578773 OR10AG1Q8NH19 301 aa6.34□□□□□ -1.39
GGA3-206ENST00000578773 SEC22CQ9BRL7 303 aa6.34□□□□□ -1.39
GGA3-206ENST00000578773 PPDPFQ9H3Y8 114 aa6.34□□□□□ -1.39
GGA3-206ENST00000578773 KCNIP2Q9NS61 270 aa6.34□□□□□ -1.39
GGA3-206ENST00000578773 ANAPC11Q9NYG5 84 aa6.34□□□□□ -1.39
GGA3-206ENST00000578773 ARL2-SNX15V9GYD0 113 aa6.34□□□□□ -1.39
GGA3-206ENST00000578773 TRAV6A0A075B6T7 132 aa6.33□□□□□ -1.4
GGA3-206ENST00000578773 FABP5P3A8MUU1 101 aa6.33□□□□□ -1.4
GGA3-206ENST00000578773 RPL18AQ02543 176 aaKnown RBP6.33□□□□□ -1.4
GGA3-206ENST00000578773 KRTAP13-2Q52LG2 175 aa6.33□□□□□ -1.4
GGA3-206ENST00000578773 LINC00173Q6ZV60 143 aa6.33□□□□□ -1.4
GGA3-206ENST00000578773 TYMSOSQ8TAI1 123 aa6.33□□□□□ -1.4
GGA3-206ENST00000578773 CENPXA8MT69 81 aa6.32□□□□□ -1.4
GGA3-206ENST00000578773 F5H697 171 aa6.32□□□□□ -1.4
GGA3-206ENST00000578773 NOL3O60936 208 aaKnown RBP6.32□□□□□ -1.4
GGA3-206ENST00000578773 XCL1P47992 114 aa6.32□□□□□ -1.4
GGA3-206ENST00000578773 SSTP61278 116 aa6.32□□□□□ -1.4
GGA3-206ENST00000578773 IL15RAQ13261 267 aa6.32□□□□□ -1.4
GGA3-206ENST00000578773 FAM162BQ5T6X4 162 aa6.32□□□□□ -1.4
GGA3-206ENST00000578773 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.32□□□□□ -1.4
GGA3-206ENST00000578773 C5orf17Q8NAS9 161 aa6.32□□□□□ -1.4
GGA3-206ENST00000578773 OPRPNQ99935 248 aaPredicted RBP6.32□□□□□ -1.4
GGA3-206ENST00000578773 RPL12P30050 165 aaKnown RBP6.31□□□□□ -1.4
GGA3-206ENST00000578773 CAMPP49913 170 aa6.31□□□□□ -1.4
GGA3-206ENST00000578773 FAM19A5Q7Z5A7 132 aaPredicted RBP6.31□□□□□ -1.4
GGA3-206ENST00000578773 NUP35Q8NFH5 326 aa6.31□□□□□ -1.4
GGA3-206ENST00000578773 PKIGQ9Y2B9 76 aa6.31□□□□□ -1.4
GGA3-206ENST00000578773 IGLV4-69A0A075B6H9 119 aa6.3□□□□□ -1.4
GGA3-206ENST00000578773 IGHV1-58A0A0C4DH39 117 aa6.3□□□□□ -1.4
GGA3-206ENST00000578773 SERTM2A0A1B0GWG4 89 aa6.3□□□□□ -1.4
GGA3-206ENST00000578773 A0A1W2PPV4 95 aa6.3□□□□□ -1.4
GGA3-206ENST00000578773 K7EQM0 130 aa6.3□□□□□ -1.4
GGA3-206ENST00000578773 ARL14EPLP0DKL9 152 aa6.3□□□□□ -1.4
GGA3-206ENST00000578773 LRRC37A5PQ49AS3 106 aa6.3□□□□□ -1.4
GGA3-206ENST00000578773 EPDR1Q9UM22 224 aa6.3□□□□□ -1.4
GGA3-206ENST00000578773 FGF6P10767 208 aa6.29□□□□□ -1.4
GGA3-206ENST00000578773 NKX2-5P52952 324 aaPredicted RBP6.29□□□□□ -1.4
GGA3-206ENST00000578773 SUMO1P63165 101 aaKnown RBP6.29□□□□□ -1.4
GGA3-206ENST00000578773 PQLC2Q6ZP29 291 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms