RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 SETD2Q9BYW2 2564 aaPredicted RBP12.92□□□□□ -0.34
ERBB2-205ENST00000578199 G3V4G9 280 aa12.92□□□□□ -0.34
ERBB2-205ENST00000578199 CEND1Q8N111 149 aa12.92□□□□□ -0.34
ERBB2-205ENST00000578199 SMIM13P0DJ93 91 aa12.91□□□□□ -0.34
ERBB2-205ENST00000578199 OPRPNQ99935 248 aaPredicted RBP12.91□□□□□ -0.34
ERBB2-205ENST00000578199 NHP2Q9NX24 153 aaKnown RBP12.91□□□□□ -0.34
ERBB2-205ENST00000578199 TRBV27A0A0K0K1C4 114 aa12.91□□□□□ -0.34
ERBB2-205ENST00000578199 OR11H12B2RN74 326 aa12.91□□□□□ -0.34
ERBB2-205ENST00000578199 PROK1P58294 105 aa12.91□□□□□ -0.34
ERBB2-205ENST00000578199 CD300EQ496F6 205 aaPredicted RBP12.91□□□□□ -0.34
ERBB2-205ENST00000578199 OR11H2Q8NH07 326 aa12.91□□□□□ -0.34
ERBB2-205ENST00000578199 CLUHP3Q96NS8 147 aa12.91□□□□□ -0.34
ERBB2-205ENST00000578199 H3BMM0 161 aa12.9□□□□□ -0.34
ERBB2-205ENST00000578199 C11orf86A6NJI1 115 aa12.9□□□□□ -0.34
ERBB2-205ENST00000578199 PRADC1Q9BSG0 188 aa12.9□□□□□ -0.34
ERBB2-205ENST00000578199 IGLV4-69A0A075B6H9 119 aa12.89□□□□□ -0.35
ERBB2-205ENST00000578199 MYMXA0A1B0GTQ4 84 aa12.89□□□□□ -0.35
ERBB2-205ENST00000578199 P0DMU3 169 aa12.89□□□□□ -0.35
ERBB2-205ENST00000578199 FAM231AP0DMU4 169 aa12.89□□□□□ -0.35
ERBB2-205ENST00000578199 FAM231CP0DMU5 169 aa12.89□□□□□ -0.35
ERBB2-205ENST00000578199 RPL32P62910 135 aaKnown RBP12.89□□□□□ -0.35
ERBB2-205ENST00000578199 A0A1W2PRX2 142 aa12.89□□□□□ -0.35
ERBB2-205ENST00000578199 Q6ZSV7 163 aa12.89□□□□□ -0.35
ERBB2-205ENST00000578199 C4orf3Q8WVX3 66 aa12.89□□□□□ -0.35
ERBB2-205ENST00000578199 HIST1H4GQ99525 98 aa12.89□□□□□ -0.35
ERBB2-205ENST00000578199 TRBV6-5A0A0K0K1A5 114 aa12.88□□□□□ -0.35
ERBB2-205ENST00000578199 TM2D2Q9BX73 214 aa12.88□□□□□ -0.35
ERBB2-205ENST00000578199 A0A1W2PPM0 123 aa12.88□□□□□ -0.35
ERBB2-205ENST00000578199 ACANP16112 2415 aa12.88□□□□□ -0.35
ERBB2-205ENST00000578199 UFSP1Q6NVU6 142 aa12.88□□□□□ -0.35
ERBB2-205ENST00000578199 PEMTQ9UBM1 199 aa12.88□□□□□ -0.35
ERBB2-205ENST00000578199 TRGV11A0A075B6L2 103 aa12.87□□□□□ -0.35
ERBB2-205ENST00000578199 DYNLRB2Q8TF09 96 aa12.87□□□□□ -0.35
ERBB2-205ENST00000578199 Q9UF83 564 aa12.87□□□□□ -0.35
ERBB2-205ENST00000578199 E9PLD3 99 aa12.87□□□□□ -0.35
ERBB2-205ENST00000578199 PMVKQ15126 192 aa12.87□□□□□ -0.35
ERBB2-205ENST00000578199 PHLDA1Q8WV24 401 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-205ENST00000578199 MAP6D1Q9H9H5 199 aa12.87□□□□□ -0.35
ERBB2-205ENST00000578199 SAMD5Q5TGI4 173 aa12.86□□□□□ -0.35
ERBB2-205ENST00000578199 PDZD2O15018 2839 aa12.86□□□□□ -0.35
ERBB2-205ENST00000578199 K7EP34 96 aa12.86□□□□□ -0.35
ERBB2-205ENST00000578199 TRPT1Q86TN4 253 aaKnown RBP12.86□□□□□ -0.35
ERBB2-205ENST00000578199 PLEKHB2Q96CS7 222 aa12.86□□□□□ -0.35
ERBB2-205ENST00000578199 DNAJC9-AS1A6NH13 148 aa12.85□□□□□ -0.35
ERBB2-205ENST00000578199 DEFB114Q30KQ6 69 aa12.85□□□□□ -0.35
ERBB2-205ENST00000578199 ZNRF2Q8NHG8 242 aa12.85□□□□□ -0.35
ERBB2-205ENST00000578199 ESM1Q9NQ30 184 aa12.85□□□□□ -0.35
ERBB2-205ENST00000578199 ZNF815PA8K554 130 aa12.85□□□□□ -0.35
ERBB2-205ENST00000578199 GTF2H5Q6ZYL4 71 aa12.85□□□□□ -0.35
ERBB2-205ENST00000578199 SPCS1Q9Y6A9 102 aa12.85□□□□□ -0.35
ERBB2-205ENST00000578199 ITPR2Q14571 2701 aa12.85□□□□□ -0.35
ERBB2-205ENST00000578199 TRBV7-3A0A075B6L6 115 aa12.84□□□□□ -0.35
ERBB2-205ENST00000578199 TMEM170BQ5T4T1 132 aa12.84□□□□□ -0.35
ERBB2-205ENST00000578199 TMEM141Q96I45 108 aa12.84□□□□□ -0.35
ERBB2-205ENST00000578199 TIMM17AQ99595 171 aa12.84□□□□□ -0.35
ERBB2-205ENST00000578199 SCGB2A2Q13296 93 aa12.83□□□□□ -0.36
ERBB2-205ENST00000578199 RAX2Q96IS3 184 aa12.83□□□□□ -0.36
ERBB2-205ENST00000578199 FABP2P12104 132 aa12.82□□□□□ -0.36
ERBB2-205ENST00000578199 C12orf74Q32Q52 190 aa12.82□□□□□ -0.36
ERBB2-205ENST00000578199 Q6ZSN1 163 aa12.82□□□□□ -0.36
ERBB2-205ENST00000578199 NACAE9PAV3 2078 aa12.82□□□□□ -0.36
ERBB2-205ENST00000578199 ANK3Q12955 4377 aaKnown RBP12.82□□□□□ -0.36
ERBB2-205ENST00000578199 I3L3M4 83 aa12.82□□□□□ -0.36
ERBB2-205ENST00000578199 SCGB1D4Q6XE38 83 aa12.82□□□□□ -0.36
ERBB2-205ENST00000578199 LINC01587Q99440 93 aa12.82□□□□□ -0.36
ERBB2-205ENST00000578199 SPAG8Q99932 426 aaPredicted RBP12.82□□□□□ -0.36
ERBB2-205ENST00000578199 A8MTW9 85 aa12.81□□□□□ -0.36
ERBB2-205ENST00000578199 CD28P10747 220 aa12.81□□□□□ -0.36
ERBB2-205ENST00000578199 TSPEAR-AS2P59090 65 aa12.81□□□□□ -0.36
ERBB2-205ENST00000578199 TAL2Q16559 108 aa12.81□□□□□ -0.36
ERBB2-205ENST00000578199 NSUN5P1Q3KNT7 163 aa12.81□□□□□ -0.36
ERBB2-205ENST00000578199 MTORP42345 2549 aa12.8□□□□□ -0.36
ERBB2-205ENST00000578199 C20orf203Q8NBC4 194 aa12.8□□□□□ -0.36
ERBB2-205ENST00000578199 XCL2Q9UBD3 114 aa12.8□□□□□ -0.36
ERBB2-205ENST00000578199 CEMP1Q6PRD7 247 aaPredicted RBP12.8□□□□□ -0.36
ERBB2-205ENST00000578199 IGLL5B9A064 214 aa12.79□□□□□ -0.36
ERBB2-205ENST00000578199 IGHV3OR16-12A0A075B7B8 117 aa12.79□□□□□ -0.36
ERBB2-205ENST00000578199 M0R2P5 195 aa12.79□□□□□ -0.36
ERBB2-205ENST00000578199 MRPL16Q9NX20 251 aaKnown RBP12.79□□□□□ -0.36
ERBB2-205ENST00000578199 IGHV3-64A0A075B6Q5 118 aa12.78□□□□□ -0.36
ERBB2-205ENST00000578199 LINC01549A6NIU2 74 aa12.78□□□□□ -0.36
ERBB2-205ENST00000578199 RHOHQ15669 191 aa12.78□□□□□ -0.36
ERBB2-205ENST00000578199 ODF3L2Q3SX64 289 aa12.78□□□□□ -0.36
ERBB2-205ENST00000578199 NOTCH3Q9UM47 2321 aa12.78□□□□□ -0.36
ERBB2-205ENST00000578199 AZU1P20160 251 aa12.78□□□□□ -0.36
ERBB2-205ENST00000578199 SETXQ7Z333 2677 aaKnown RBP12.78□□□□□ -0.36
ERBB2-205ENST00000578199 TRAV2A0A0B4J234 112 aa12.77□□□□□ -0.37
ERBB2-205ENST00000578199 TMEM86BQ8N661 226 aa12.77□□□□□ -0.37
ERBB2-205ENST00000578199 SCGB1A1P11684 91 aa12.77□□□□□ -0.37
ERBB2-205ENST00000578199 SRSF9Q13242 221 aaKnown RBP eCLIP12.77□□□□□ -0.37
ERBB2-205ENST00000578199 RNASE13Q5GAN3 156 aaKnown RBP12.77□□□□□ -0.37
ERBB2-205ENST00000578199 PAPPA-AS1Q5QFB9 102 aa12.77□□□□□ -0.37
ERBB2-205ENST00000578199 CFAP126Q5VTH2 177 aa12.77□□□□□ -0.37
ERBB2-205ENST00000578199 C11orf72Q8NBR9 251 aa12.77□□□□□ -0.37
ERBB2-205ENST00000578199 CITED2Q99967 270 aaPredicted RBP12.77□□□□□ -0.37
ERBB2-205ENST00000578199 CCL24O00175 119 aa12.76□□□□□ -0.37
ERBB2-205ENST00000578199 HERVK_113P61574 105 aa12.76□□□□□ -0.37
ERBB2-205ENST00000578199 ZNF415Q09FC8 603 aa12.76□□□□□ -0.37
ERBB2-205ENST00000578199 TNFRSF18Q9Y5U5 241 aa12.76□□□□□ -0.37
ERBB2-205ENST00000578199 IGLV4-3A0A075B6K6 122 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms