RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 NAT8Q9UHE5 227 aa3.91□□□□□ -1.78
SMG6-219ENST00000575663 COX11Q9Y6N1 276 aa3.91□□□□□ -1.78
SMG6-219ENST00000575663 A0A087X0K7 114 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 TRAV12-3A0A0B4J271 114 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 TRGV4A0A0C4DH28 118 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 RBFOX3A6NFN3 312 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 IBA57-AS1B1ANH7 110 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 C9JCJ5 164 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 H3BRN7 92 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 K7EQD1 137 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 SPINK4O60575 86 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 HYPMO75409 117 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 IGLV2-11P01706 119 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 MT1HL1P0DM35 61 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 TCL1AP56279 114 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 NDUFA6P56556 154 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 RPL24P83731 157 aaKnown RBP3.9□□□□□ -1.79
SMG6-219ENST00000575663 LAGE3Q14657 143 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 C4orf48Q5BLP8 95 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 LINC01556Q5JQF7 62 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 ZNF506Q5JVG8 444 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 C10orf113Q5VZT2 155 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 FAM159AQ6UWV7 190 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 CIRBP-AS1Q8TBR5 109 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 MIEN1Q9BRT3 115 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 SLC50A1Q9BRV3 221 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 TMEM126AQ9H061 195 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 TMEM14CQ9P0S9 112 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 VAX2Q9UIW0 290 aa3.9□□□□□ -1.79
SMG6-219ENST00000575663 TRAV8-6A0A0B4J262 113 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 A0A1W2PRE2 83 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 COX7A2P2O60397 106 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 GAS8-AS1O95177 125 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 BCL2P10415 239 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 MEF2BQ02080 365 aaPredicted RBP3.89□□□□□ -1.79
SMG6-219ENST00000575663 PDE6HQ13956 83 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 ZNF726P1Q15940 193 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 ANXA2RQ3ZCQ2 193 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 TMEM97Q5BJF2 176 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 IBA57Q5T440 356 aaKnown RBP3.89□□□□□ -1.79
SMG6-219ENST00000575663 MIC13Q5XKP0 118 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 LCN15Q6UWW0 184 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 Q6ZRU5 148 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 SH2D6Q7Z4S9 175 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 HIST3H2BBQ8N257 126 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 C11orf72Q8NBR9 251 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 ODF3Q96PU9 254 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 SHANK2-AS3Q9BTD1 123 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 EIF5A2Q9GZV4 153 aaKnown RBP3.89□□□□□ -1.79
SMG6-219ENST00000575663 DPH3P1Q9H4G8 78 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 ERG28Q9UKR5 140 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 HIGD1AQ9Y241 93 aa3.89□□□□□ -1.79
SMG6-219ENST00000575663 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
SMG6-219ENST00000575663 B4DEV8 164 aa3.88□□□□□ -1.79
SMG6-219ENST00000575663 LECT2O14960 151 aa3.88□□□□□ -1.79
SMG6-219ENST00000575663 ZNF253O75346 499 aa3.88□□□□□ -1.79
SMG6-219ENST00000575663 SLC25A5P05141 298 aaKnown RBP3.88□□□□□ -1.79
SMG6-219ENST00000575663 FABP4P15090 132 aa3.88□□□□□ -1.79
SMG6-219ENST00000575663 GATA2P23769 480 aaPredicted RBP3.88□□□□□ -1.79
SMG6-219ENST00000575663 GCHFRP30047 84 aa3.88□□□□□ -1.79
SMG6-219ENST00000575663 GNG4P50150 75 aa3.88□□□□□ -1.79
SMG6-219ENST00000575663 HNRNPA3P51991 378 aaKnown RBP3.88□□□□□ -1.79
SMG6-219ENST00000575663 SMAGPQ0VAQ4 97 aa3.88□□□□□ -1.79
SMG6-219ENST00000575663 PNRC1Q12796 327 aaPredicted RBP3.88□□□□□ -1.79
SMG6-219ENST00000575663 FHL2Q14192 279 aa3.88□□□□□ -1.79
SMG6-219ENST00000575663 BATFQ16520 125 aa3.88□□□□□ -1.79
SMG6-219ENST00000575663 LINC01620Q4KN68 170 aa3.88□□□□□ -1.79
SMG6-219ENST00000575663 BPIFA4PQ86YQ2 179 aa3.88□□□□□ -1.79
SMG6-219ENST00000575663 BLNKQ8WV28 456 aa3.88□□□□□ -1.79
SMG6-219ENST00000575663 TRAV8-3A0A0A6YYJ7 113 aa3.87□□□□□ -1.79
SMG6-219ENST00000575663 C7orf71A4D174 169 aa3.87□□□□□ -1.79
SMG6-219ENST00000575663 GZMBP10144 247 aa3.87□□□□□ -1.79
SMG6-219ENST00000575663 AMTP48728 403 aa3.87□□□□□ -1.79
SMG6-219ENST00000575663 WFDC2Q14508 124 aa3.87□□□□□ -1.79
SMG6-219ENST00000575663 OR10J3Q5JRS4 329 aa3.87□□□□□ -1.79
SMG6-219ENST00000575663 PATE2Q6UY27 113 aa3.87□□□□□ -1.79
SMG6-219ENST00000575663 LINC00305Q7Z4B0 112 aa3.87□□□□□ -1.79
SMG6-219ENST00000575663 ATP6V0E2Q8NHE4 81 aa3.87□□□□□ -1.79
SMG6-219ENST00000575663 FAM167A-AS1Q96KT0 104 aa3.87□□□□□ -1.79
SMG6-219ENST00000575663 ZNF331Q9NQX6 463 aaPredicted RBP3.87□□□□□ -1.79
SMG6-219ENST00000575663 GNG13Q9P2W3 67 aa3.87□□□□□ -1.79
SMG6-219ENST00000575663 KLF12Q9Y4X4 402 aa3.87□□□□□ -1.79
SMG6-219ENST00000575663 IGHV3-30P01768 117 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 IGHV3-33P01772 117 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 SRP19P09132 144 aaKnown RBP3.86□□□□□ -1.79
SMG6-219ENST00000575663 SFTA3P0C7M3 94 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 ARL14EPLP0DKL9 152 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 CT45A10P0DMU9 189 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 IGHV3-30-3P0DP02 117 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 IGHV3-30-5P0DP03 117 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 VPREB1P12018 145 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 CCL20P78556 96 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 PMVKQ15126 192 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 TMEM183BQ1AE95 376 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 TMEM78Q5T7P6 136 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 C9orf47Q6ZRZ4 202 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 Q8N976 141 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 C11orf52Q96A22 123 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 RMI2Q96E14 147 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 DNAJC30Q96LL9 226 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms