RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 SPATA25Q9BR10 227 aa14.48□□□□□ -0.09
SPNS2-203ENST00000570979 TRAV26-2A0A0B4J265 109 aa14.47□□□□□ -0.09
SPNS2-203ENST00000570979 FABP2P12104 132 aa14.47□□□□□ -0.09
SPNS2-203ENST00000570979 CD300EQ496F6 205 aaPredicted RBP14.47□□□□□ -0.09
SPNS2-203ENST00000570979 ADAMTSL5Q6ZMM2 481 aa14.47□□□□□ -0.09
SPNS2-203ENST00000570979 BOD1L2Q8IYS8 172 aa14.47□□□□□ -0.09
SPNS2-203ENST00000570979 RASL10AQ92737 203 aa14.47□□□□□ -0.09
SPNS2-203ENST00000570979 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.47□□□□□ -0.09
SPNS2-203ENST00000570979 AMTNQ6UX39 209 aa14.47□□□□□ -0.09
SPNS2-203ENST00000570979 SPCS1Q9Y6A9 102 aa14.47□□□□□ -0.09
SPNS2-203ENST00000570979 KIF25-AS1Q9Y6Z4 181 aa14.47□□□□□ -0.09
SPNS2-203ENST00000570979 AZU1P20160 251 aa14.46□□□□□ -0.09
SPNS2-203ENST00000570979 DEFB136Q30KP8 78 aa14.46□□□□□ -0.09
SPNS2-203ENST00000570979 PIK3CD-AS1Q5SR53 167 aa14.46□□□□□ -0.09
SPNS2-203ENST00000570979 DLX4Q92988 240 aaPredicted RBP14.46□□□□□ -0.09
SPNS2-203ENST00000570979 SELENOKQ9Y6D0 94 aa14.46□□□□□ -0.09
SPNS2-203ENST00000570979 H3BUT2 72 aa14.45□□□□□ -0.1
SPNS2-203ENST00000570979 DEFB131AP59861 70 aa14.45□□□□□ -0.1
SPNS2-203ENST00000570979 SPINK13Q1W4C9 94 aa14.45□□□□□ -0.1
SPNS2-203ENST00000570979 DEFB114Q30KQ6 69 aa14.45□□□□□ -0.1
SPNS2-203ENST00000570979 ZMAT4Q9H898 229 aa14.45□□□□□ -0.1
SPNS2-203ENST00000570979 TSSC4Q9Y5U2 329 aaPredicted RBP14.45□□□□□ -0.1
SPNS2-203ENST00000570979 A6NJY4 79 aa14.45□□□□□ -0.1
SPNS2-203ENST00000570979 IGKV3-20P01619 116 aa14.45□□□□□ -0.1
SPNS2-203ENST00000570979 C18orf15Q96N68 181 aa14.45□□□□□ -0.1
SPNS2-203ENST00000570979 TRAV12-1A0A0B4J245 112 aa14.44□□□□□ -0.1
SPNS2-203ENST00000570979 H3BMM0 161 aa14.44□□□□□ -0.1
SPNS2-203ENST00000570979 VCYO14598 125 aa14.44□□□□□ -0.1
SPNS2-203ENST00000570979 DPM2O94777 84 aa14.44□□□□□ -0.1
SPNS2-203ENST00000570979 FXYD7P58549 80 aa14.44□□□□□ -0.1
SPNS2-203ENST00000570979 Q8N1Y9 231 aa14.44□□□□□ -0.1
SPNS2-203ENST00000570979 RAX2Q96IS3 184 aa14.44□□□□□ -0.1
SPNS2-203ENST00000570979 TP73-AS1Q9UF72 201 aa14.44□□□□□ -0.1
SPNS2-203ENST00000570979 IGKCP01834 107 aa14.43□□□□□ -0.1
SPNS2-203ENST00000570979 FHL3Q13643 280 aa14.43□□□□□ -0.1
SPNS2-203ENST00000570979 ODF1Q14990 250 aa14.43□□□□□ -0.1
SPNS2-203ENST00000570979 C18orf65Q6ZTR6 163 aa14.43□□□□□ -0.1
SPNS2-203ENST00000570979 TMEM61Q8N0U2 210 aa14.43□□□□□ -0.1
SPNS2-203ENST00000570979 TOMM6Q96B49 74 aa14.43□□□□□ -0.1
SPNS2-203ENST00000570979 LINC00467Q9BRT7 94 aa14.43□□□□□ -0.1
SPNS2-203ENST00000570979 MCRIP2Q9BUT9 160 aaKnown RBP14.43□□□□□ -0.1
SPNS2-203ENST00000570979 TRBV6-5A0A0K0K1A5 114 aa14.42□□□□□ -0.1
SPNS2-203ENST00000570979 PLNP26678 52 aa14.42□□□□□ -0.1
SPNS2-203ENST00000570979 PTH2Q96A98 100 aa14.42□□□□□ -0.1
SPNS2-203ENST00000570979 KIR2DL4Q99706 377 aa14.42□□□□□ -0.1
SPNS2-203ENST00000570979 TRAV12-2A0A075B6T6 113 aa14.42□□□□□ -0.1
SPNS2-203ENST00000570979 F5H697 171 aa14.42□□□□□ -0.1
SPNS2-203ENST00000570979 LINC00315P59091 139 aa14.42□□□□□ -0.1
SPNS2-203ENST00000570979 C11orf44Q8N8P7 122 aa14.42□□□□□ -0.1
SPNS2-203ENST00000570979 H7C1H1 209 aa14.41□□□□□ -0.1
SPNS2-203ENST00000570979 CCL24O00175 119 aa14.41□□□□□ -0.1
SPNS2-203ENST00000570979 SCGB3A1Q96QR1 104 aa14.41□□□□□ -0.1
SPNS2-203ENST00000570979 HIGD1BQ9P298 99 aa14.41□□□□□ -0.1
SPNS2-203ENST00000570979 A0A087WX48 190 aa14.4□□□□□ -0.1
SPNS2-203ENST00000570979 GAGE12HA6NDE8 117 aa14.4□□□□□ -0.1
SPNS2-203ENST00000570979 F8W1H4 67 aa14.4□□□□□ -0.1
SPNS2-203ENST00000570979 NOTCH1P46531 2555 aa14.4□□□□□ -0.1
SPNS2-203ENST00000570979 MAP6D1Q9H9H5 199 aa14.39□□□□□ -0.11
SPNS2-203ENST00000570979 SUMO4Q6EEV6 95 aa14.39□□□□□ -0.11
SPNS2-203ENST00000570979 TRPT1Q86TN4 253 aaKnown RBP14.39□□□□□ -0.11
SPNS2-203ENST00000570979 RPL39LQ96EH5 51 aaKnown RBP14.39□□□□□ -0.11
SPNS2-203ENST00000570979 MDFICQ9P1T7 246 aa14.39□□□□□ -0.11
SPNS2-203ENST00000570979 CYSLTR1Q9Y271 337 aa14.39□□□□□ -0.11
SPNS2-203ENST00000570979 ZNF256Q9Y2P7 627 aaPredicted RBP14.39□□□□□ -0.11
SPNS2-203ENST00000570979 TEX48A0A1B0GUV7 120 aa14.38□□□□□ -0.11
SPNS2-203ENST00000570979 KNCNA6PVL3 124 aa14.38□□□□□ -0.11
SPNS2-203ENST00000570979 POLR2KP53803 58 aaKnown RBP14.38□□□□□ -0.11
SPNS2-203ENST00000570979 DKK2Q9UBU2 259 aa14.38□□□□□ -0.11
SPNS2-203ENST00000570979 ZNF415Q09FC8 603 aa14.37□□□□□ -0.11
SPNS2-203ENST00000570979 ZNF876PQ49A33 203 aa14.37□□□□□ -0.11
SPNS2-203ENST00000570979 SAMD5Q5TGI4 173 aa14.37□□□□□ -0.11
SPNS2-203ENST00000570979 EDA2RQ9HAV5 297 aa14.37□□□□□ -0.11
SPNS2-203ENST00000570979 SMIM13P0DJ93 91 aa14.37□□□□□ -0.11
SPNS2-203ENST00000570979 PAPPA-AS1Q5QFB9 102 aa14.37□□□□□ -0.11
SPNS2-203ENST00000570979 C2orf66Q6UXQ4 117 aa14.37□□□□□ -0.11
SPNS2-203ENST00000570979 SPXQ9BT56 116 aa14.37□□□□□ -0.11
SPNS2-203ENST00000570979 TRBV27A0A0K0K1C4 114 aa14.36□□□□□ -0.11
SPNS2-203ENST00000570979 A8MWV9 139 aa14.36□□□□□ -0.11
SPNS2-203ENST00000570979 INSP01308 110 aa14.36□□□□□ -0.11
SPNS2-203ENST00000570979 CKS1BP61024 79 aa14.36□□□□□ -0.11
SPNS2-203ENST00000570979 TMEM141Q96I45 108 aa14.36□□□□□ -0.11
SPNS2-203ENST00000570979 DUX3Q96PT4 197 aa14.36□□□□□ -0.11
SPNS2-203ENST00000570979 F8VRH5 84 aa14.35□□□□□ -0.11
SPNS2-203ENST00000570979 SMAGPQ0VAQ4 97 aa14.35□□□□□ -0.11
SPNS2-203ENST00000570979 ZNF56Q15929 161 aa14.35□□□□□ -0.11
SPNS2-203ENST00000570979 GTSF1LQ9H1H1 148 aa14.35□□□□□ -0.11
SPNS2-203ENST00000570979 MUC4Q99102 2169 aa14.35□□□□□ -0.11
SPNS2-203ENST00000570979 A0A087WWL8 130 aa14.34□□□□□ -0.11
SPNS2-203ENST00000570979 M0R2P5 195 aa14.34□□□□□ -0.11
SPNS2-203ENST00000570979 SPRY2O43597 315 aa14.34□□□□□ -0.11
SPNS2-203ENST00000570979 CRYGDP07320 174 aa14.34□□□□□ -0.11
SPNS2-203ENST00000570979 CD28P10747 220 aa14.34□□□□□ -0.11
SPNS2-203ENST00000570979 RHOHQ15669 191 aa14.34□□□□□ -0.11
SPNS2-203ENST00000570979 HHLA3Q9XRX5 114 aa14.34□□□□□ -0.11
SPNS2-203ENST00000570979 RPL24P83731 157 aaKnown RBP14.34□□□□□ -0.11
SPNS2-203ENST00000570979 CFAP161Q6P656 301 aa14.34□□□□□ -0.11
SPNS2-203ENST00000570979 SPANXB1Q9NS25 103 aaPredicted RBP14.34□□□□□ -0.11
SPNS2-203ENST00000570979 SDHAF1A6NFY7 115 aa14.33□□□□□ -0.12
SPNS2-203ENST00000570979 OR11H12B2RN74 326 aa14.33□□□□□ -0.12
SPNS2-203ENST00000570979 M0QY20 66 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms