RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 MT-ND6P03923 174 aa7.33□□□□□ -1.24
CDH3-210ENST00000569117 HTN3P15516 51 aa7.33□□□□□ -1.24
CDH3-210ENST00000569117 SLAQ13239 276 aa7.33□□□□□ -1.24
CDH3-210ENST00000569117 FAM104BQ5XKR9 115 aa7.33□□□□□ -1.24
CDH3-210ENST00000569117 TMEM136Q6ZRR5 245 aa7.33□□□□□ -1.24
CDH3-210ENST00000569117 AMN1Q8IY45 258 aa7.33□□□□□ -1.24
CDH3-210ENST00000569117 FRZBQ92765 325 aa7.33□□□□□ -1.24
CDH3-210ENST00000569117 RNF185Q96GF1 192 aa7.33□□□□□ -1.24
CDH3-210ENST00000569117 FAM210BQ96KR6 192 aa7.33□□□□□ -1.24
CDH3-210ENST00000569117 PRO0255Q9UI72 69 aa7.33□□□□□ -1.24
CDH3-210ENST00000569117 K7EQD1 137 aa7.32□□□□□ -1.24
CDH3-210ENST00000569117 HLA-DQA1P01909 254 aa7.32□□□□□ -1.24
CDH3-210ENST00000569117 RAB4AP20338 218 aa7.32□□□□□ -1.24
CDH3-210ENST00000569117 CRYBA4P53673 196 aa7.32□□□□□ -1.24
CDH3-210ENST00000569117 RHOHQ15669 191 aa7.32□□□□□ -1.24
CDH3-210ENST00000569117 SUMO4Q6EEV6 95 aa7.32□□□□□ -1.24
CDH3-210ENST00000569117 Q6ZSN1 163 aa7.32□□□□□ -1.24
CDH3-210ENST00000569117 SLC25A29Q8N8R3 303 aa7.32□□□□□ -1.24
CDH3-210ENST00000569117 PHLDA1Q8WV24 401 aaPredicted RBP7.32□□□□□ -1.24
CDH3-210ENST00000569117 WWC2-AS2Q96NR7 200 aa7.32□□□□□ -1.24
CDH3-210ENST00000569117 GNB1LQ9BYB4 327 aa7.32□□□□□ -1.24
CDH3-210ENST00000569117 HHLA3Q9XRX5 114 aa7.32□□□□□ -1.24
CDH3-210ENST00000569117 DNAH7Q8WXX0 4024 aa7.32□□□□□ -1.24
CDH3-210ENST00000569117 NUPR2A6NF83 97 aa7.31□□□□□ -1.24
CDH3-210ENST00000569117 H3BNG1 76 aa7.31□□□□□ -1.24
CDH3-210ENST00000569117 H7C1H1 209 aa7.31□□□□□ -1.24
CDH3-210ENST00000569117 MRAP2Q96G30 205 aa7.31□□□□□ -1.24
CDH3-210ENST00000569117 TRAV26-1A0A087WT03 109 aa7.3□□□□□ -1.24
CDH3-210ENST00000569117 TRAV26-2A0A0B4J265 109 aa7.3□□□□□ -1.24
CDH3-210ENST00000569117 TRBV10-1A0A0K0K1A3 114 aa7.3□□□□□ -1.24
CDH3-210ENST00000569117 COLCA2A8K830 154 aa7.3□□□□□ -1.24
CDH3-210ENST00000569117 M0QY20 66 aa7.3□□□□□ -1.24
CDH3-210ENST00000569117 LINC00310P59036 64 aa7.3□□□□□ -1.24
CDH3-210ENST00000569117 SUMO2P61956 95 aaKnown RBP7.3□□□□□ -1.24
CDH3-210ENST00000569117 MRPL51Q4U2R6 128 aaKnown RBP7.3□□□□□ -1.24
CDH3-210ENST00000569117 VSIG2Q96IQ7 327 aa7.3□□□□□ -1.24
CDH3-210ENST00000569117 PAX4O43316 350 aa7.29□□□□□ -1.24
CDH3-210ENST00000569117 PPBPP02775 128 aa7.29□□□□□ -1.24
CDH3-210ENST00000569117 LINC00694P0DN24 101 aa7.29□□□□□ -1.24
CDH3-210ENST00000569117 MUC7Q8TAX7 377 aa7.29□□□□□ -1.24
CDH3-210ENST00000569117 PRADC1Q9BSG0 188 aa7.29□□□□□ -1.24
CDH3-210ENST00000569117 CSMD3Q7Z407 3707 aa7.29□□□□□ -1.24
CDH3-210ENST00000569117 A0A0J9YY99 117 aa7.28□□□□□ -1.24
CDH3-210ENST00000569117 D6R8Y8 96 aa7.28□□□□□ -1.24
CDH3-210ENST00000569117 NCR2O95944 276 aa7.28□□□□□ -1.24
CDH3-210ENST00000569117 APCSP02743 223 aa7.28□□□□□ -1.24
CDH3-210ENST00000569117 P0DMU3 169 aa7.28□□□□□ -1.24
CDH3-210ENST00000569117 FAM231AP0DMU4 169 aa7.28□□□□□ -1.24
CDH3-210ENST00000569117 FAM231CP0DMU5 169 aa7.28□□□□□ -1.24
CDH3-210ENST00000569117 RAB5AP20339 215 aa7.28□□□□□ -1.24
CDH3-210ENST00000569117 CEMP1Q6PRD7 247 aaPredicted RBP7.28□□□□□ -1.24
CDH3-210ENST00000569117 ORMDL3Q8N138 153 aa7.28□□□□□ -1.24
CDH3-210ENST00000569117 NEXN-AS1Q8NBZ9 246 aa7.28□□□□□ -1.24
CDH3-210ENST00000569117 TRBV6-5A0A0K0K1A5 114 aa7.27□□□□□ -1.25
CDH3-210ENST00000569117 LOC100131303A0A0U1RQF7 123 aa7.27□□□□□ -1.25
CDH3-210ENST00000569117 SMKR1H3BMG3 65 aa7.27□□□□□ -1.25
CDH3-210ENST00000569117 GAS8-AS1O95177 125 aa7.27□□□□□ -1.25
CDH3-210ENST00000569117 PPP1R17O96001 155 aa7.27□□□□□ -1.25
CDH3-210ENST00000569117 CKS2P33552 79 aa7.27□□□□□ -1.25
CDH3-210ENST00000569117 RPS10P46783 165 aaKnown RBP7.27□□□□□ -1.25
CDH3-210ENST00000569117 RPL36AP83881 106 aaKnown RBP7.27□□□□□ -1.25
CDH3-210ENST00000569117 NRACQ8N912 160 aa7.27□□□□□ -1.25
CDH3-210ENST00000569117 C15orf53Q8NAA6 179 aa7.27□□□□□ -1.25
CDH3-210ENST00000569117 RPL36ALQ969Q0 106 aaKnown RBP7.27□□□□□ -1.25
CDH3-210ENST00000569117 RPL39LQ96EH5 51 aaKnown RBP7.27□□□□□ -1.25
CDH3-210ENST00000569117 DNAJC30Q96LL9 226 aa7.27□□□□□ -1.25
CDH3-210ENST00000569117 NIT2Q9NQR4 276 aa7.27□□□□□ -1.25
CDH3-210ENST00000569117 Q9UF83 564 aa7.27□□□□□ -1.25
CDH3-210ENST00000569117 LAMTOR2Q9Y2Q5 125 aa7.27□□□□□ -1.25
CDH3-210ENST00000569117 TRAPPC1Q9Y5R8 145 aa7.27□□□□□ -1.25
CDH3-210ENST00000569117 ICOSQ9Y6W8 199 aa7.27□□□□□ -1.25
CDH3-210ENST00000569117 TRBV7-3A0A075B6L6 115 aa7.26□□□□□ -1.25
CDH3-210ENST00000569117 GAGE12HA6NDE8 117 aa7.26□□□□□ -1.25
CDH3-210ENST00000569117 PHOX2AO14813 284 aa7.26□□□□□ -1.25
CDH3-210ENST00000569117 UBE2D3P61077 147 aa7.26□□□□□ -1.25
CDH3-210ENST00000569117 UBE2D2P62837 147 aa7.26□□□□□ -1.25
CDH3-210ENST00000569117 OR10J3Q5JRS4 329 aa7.26□□□□□ -1.25
CDH3-210ENST00000569117 KLK5Q9Y337 293 aaPredicted RBP7.26□□□□□ -1.25
CDH3-210ENST00000569117 DYNC2H1Q8NCM8 4307 aaKnown RBP7.25□□□□□ -1.25
CDH3-210ENST00000569117 A0A096LPF7 62 aa7.25□□□□□ -1.25
CDH3-210ENST00000569117 GAGE12JA6NER3 117 aa7.25□□□□□ -1.25
CDH3-210ENST00000569117 IGLL5B9A064 214 aa7.25□□□□□ -1.25
CDH3-210ENST00000569117 NPYP01303 97 aa7.25□□□□□ -1.25
CDH3-210ENST00000569117 SRIP30626 198 aa7.25□□□□□ -1.25
CDH3-210ENST00000569117 TCTAP57738 103 aa7.25□□□□□ -1.25
CDH3-210ENST00000569117 FABP9Q0Z7S8 132 aa7.25□□□□□ -1.25
CDH3-210ENST00000569117 GAGE1Q13065 139 aa7.25□□□□□ -1.25
CDH3-210ENST00000569117 GAGE4Q13068 117 aa7.25□□□□□ -1.25
CDH3-210ENST00000569117 GAGE5Q13069 117 aa7.25□□□□□ -1.25
CDH3-210ENST00000569117 MRPL23Q16540 153 aaKnown RBP7.25□□□□□ -1.25
CDH3-210ENST00000569117 SH2D6Q7Z4S9 175 aa7.25□□□□□ -1.25
CDH3-210ENST00000569117 PRELID3AQ96N28 172 aa7.25□□□□□ -1.25
CDH3-210ENST00000569117 KIAA1644Q3SXP7 199 aa7.24□□□□□ -1.25
CDH3-210ENST00000569117 ZFAND6Q6FIF0 208 aa7.24□□□□□ -1.25
CDH3-210ENST00000569117 ZNRF2Q8NHG8 242 aa7.24□□□□□ -1.25
CDH3-210ENST00000569117 C20orf78Q9BR46 151 aa7.24□□□□□ -1.25
CDH3-210ENST00000569117 ALKBH7Q9BT30 221 aaPredicted RBP7.24□□□□□ -1.25
CDH3-210ENST00000569117 ST20Q9HBF5 79 aa7.24□□□□□ -1.25
CDH3-210ENST00000569117 TNFRSF18Q9Y5U5 241 aa7.24□□□□□ -1.25
CDH3-210ENST00000569117 STARD9Q9P2P6 4700 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms