RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 NUPR2A6NF83 97 aa5.91□□□□□ -1.46
SF3B3-212ENST00000568539 F5H697 171 aa5.91□□□□□ -1.46
SF3B3-212ENST00000568539 H3BNG1 76 aa5.91□□□□□ -1.46
SF3B3-212ENST00000568539 ODF1Q14990 250 aa5.91□□□□□ -1.46
SF3B3-212ENST00000568539 FAM104BQ5XKR9 115 aa5.91□□□□□ -1.46
SF3B3-212ENST00000568539 SUMO4Q6EEV6 95 aa5.91□□□□□ -1.46
SF3B3-212ENST00000568539 TMEM136Q6ZRR5 245 aa5.91□□□□□ -1.46
SF3B3-212ENST00000568539 TENM2Q9NT68 2774 aa5.91□□□□□ -1.46
SF3B3-212ENST00000568539 LYSTQ99698 3801 aa5.91□□□□□ -1.46
SF3B3-212ENST00000568539 TRAV26-2A0A0B4J265 109 aa5.9□□□□□ -1.46
SF3B3-212ENST00000568539 A0A0J9YY99 117 aa5.9□□□□□ -1.46
SF3B3-212ENST00000568539 LOC100131303A0A0U1RQF7 123 aa5.9□□□□□ -1.46
SF3B3-212ENST00000568539 K7EQD1 137 aa5.9□□□□□ -1.46
SF3B3-212ENST00000568539 M0QY20 66 aa5.9□□□□□ -1.46
SF3B3-212ENST00000568539 PAX4O43316 350 aa5.9□□□□□ -1.46
SF3B3-212ENST00000568539 RHOHQ15669 191 aa5.9□□□□□ -1.46
SF3B3-212ENST00000568539 COX19Q49B96 90 aa5.9□□□□□ -1.46
SF3B3-212ENST00000568539 FRZBQ92765 325 aa5.9□□□□□ -1.46
SF3B3-212ENST00000568539 MRAP2Q96G30 205 aa5.9□□□□□ -1.46
SF3B3-212ENST00000568539 FAM210BQ96KR6 192 aa5.9□□□□□ -1.46
SF3B3-212ENST00000568539 PRADC1Q9BSG0 188 aa5.9□□□□□ -1.46
SF3B3-212ENST00000568539 GNB1LQ9BYB4 327 aa5.9□□□□□ -1.46
SF3B3-212ENST00000568539 Q9UF83 564 aa5.9□□□□□ -1.46
SF3B3-212ENST00000568539 TRBV10-1A0A0K0K1A3 114 aa5.89□□□□□ -1.47
SF3B3-212ENST00000568539 COLCA2A8K830 154 aa5.89□□□□□ -1.47
SF3B3-212ENST00000568539 IGLL5B9A064 214 aa5.89□□□□□ -1.47
SF3B3-212ENST00000568539 H7C1H1 209 aa5.89□□□□□ -1.47
SF3B3-212ENST00000568539 HLA-DQA1P01909 254 aa5.89□□□□□ -1.47
SF3B3-212ENST00000568539 P0DMU3 169 aa5.89□□□□□ -1.47
SF3B3-212ENST00000568539 FAM231AP0DMU4 169 aa5.89□□□□□ -1.47
SF3B3-212ENST00000568539 FAM231CP0DMU5 169 aa5.89□□□□□ -1.47
SF3B3-212ENST00000568539 MRPL51Q4U2R6 128 aaKnown RBP5.89□□□□□ -1.47
SF3B3-212ENST00000568539 ZFAND6Q6FIF0 208 aa5.89□□□□□ -1.47
SF3B3-212ENST00000568539 PLA2G2DQ9UNK4 145 aa5.89□□□□□ -1.47
SF3B3-212ENST00000568539 DNAH7Q8WXX0 4024 aa5.89□□□□□ -1.47
SF3B3-212ENST00000568539 MUC4Q99102 2169 aa5.89□□□□□ -1.47
SF3B3-212ENST00000568539 CSMD3Q7Z407 3707 aa5.88□□□□□ -1.47
SF3B3-212ENST00000568539 A0A096LPF7 62 aa5.88□□□□□ -1.47
SF3B3-212ENST00000568539 SMKR1H3BMG3 65 aa5.88□□□□□ -1.47
SF3B3-212ENST00000568539 GAS8-AS1O95177 125 aa5.88□□□□□ -1.47
SF3B3-212ENST00000568539 NCR2O95944 276 aa5.88□□□□□ -1.47
SF3B3-212ENST00000568539 MT-ND6P03923 174 aa5.88□□□□□ -1.47
SF3B3-212ENST00000568539 LINC00694P0DN24 101 aa5.88□□□□□ -1.47
SF3B3-212ENST00000568539 GYPEP15421 78 aa5.88□□□□□ -1.47
SF3B3-212ENST00000568539 RPS10P46783 165 aaKnown RBP5.88□□□□□ -1.47
SF3B3-212ENST00000568539 NEXN-AS1Q8NBZ9 246 aa5.88□□□□□ -1.47
SF3B3-212ENST00000568539 NIT2Q9NQR4 276 aa5.88□□□□□ -1.47
SF3B3-212ENST00000568539 KLK5Q9Y337 293 aaPredicted RBP5.88□□□□□ -1.47
SF3B3-212ENST00000568539 GAGE12JA6NER3 117 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 D6R8Y8 96 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 C3orf84H3BNL1 204 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 APCSP02743 223 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 PPBPP02775 128 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 CKS2P33552 79 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 RPL36AP83881 106 aaKnown RBP5.87□□□□□ -1.47
SF3B3-212ENST00000568539 GAGE1Q13065 139 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 GAGE4Q13068 117 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 GAGE5Q13069 117 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 MRPL23Q16540 153 aaKnown RBP5.87□□□□□ -1.47
SF3B3-212ENST00000568539 GAGE13Q4V321 117 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 NRACQ8N912 160 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 C15orf53Q8NAA6 179 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 ZNRF2Q8NHG8 242 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 RPL36ALQ969Q0 106 aaKnown RBP5.87□□□□□ -1.47
SF3B3-212ENST00000568539 RPL39LQ96EH5 51 aaKnown RBP5.87□□□□□ -1.47
SF3B3-212ENST00000568539 DNAJC30Q96LL9 226 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 APLNQ9ULZ1 77 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 ICOSQ9Y6W8 199 aa5.87□□□□□ -1.47
SF3B3-212ENST00000568539 TRBV7-3A0A075B6L6 115 aa5.86□□□□□ -1.47
SF3B3-212ENST00000568539 TRBV6-5A0A0K0K1A5 114 aa5.86□□□□□ -1.47
SF3B3-212ENST00000568539 NUDT3O95989 172 aa5.86□□□□□ -1.47
SF3B3-212ENST00000568539 RAB5AP20339 215 aa5.86□□□□□ -1.47
SF3B3-212ENST00000568539 SRIP30626 198 aa5.86□□□□□ -1.47
SF3B3-212ENST00000568539 TCTAP57738 103 aa5.86□□□□□ -1.47
SF3B3-212ENST00000568539 UBE2D3P61077 147 aa5.86□□□□□ -1.47
SF3B3-212ENST00000568539 UBE2D2P62837 147 aa5.86□□□□□ -1.47
SF3B3-212ENST00000568539 KIAA1644Q3SXP7 199 aa5.86□□□□□ -1.47
SF3B3-212ENST00000568539 OR10J3Q5JRS4 329 aa5.86□□□□□ -1.47
SF3B3-212ENST00000568539 CASC10Q5T4H9 136 aa5.86□□□□□ -1.47
SF3B3-212ENST00000568539 ORMDL3Q8N138 153 aa5.86□□□□□ -1.47
SF3B3-212ENST00000568539 TRAPPC1Q9Y5R8 145 aa5.86□□□□□ -1.47
SF3B3-212ENST00000568539 TNFRSF18Q9Y5U5 241 aa5.86□□□□□ -1.47
SF3B3-212ENST00000568539 STAB2Q8WWQ8 2551 aa5.86□□□□□ -1.47
SF3B3-212ENST00000568539 TNFRSF6BO95407 300 aa5.85□□□□□ -1.47
SF3B3-212ENST00000568539 PPP1R17O96001 155 aa5.85□□□□□ -1.47
SF3B3-212ENST00000568539 NPYP01303 97 aa5.85□□□□□ -1.47
SF3B3-212ENST00000568539 FABP9Q0Z7S8 132 aa5.85□□□□□ -1.47
SF3B3-212ENST00000568539 NEGR1Q7Z3B1 354 aa5.85□□□□□ -1.47
SF3B3-212ENST00000568539 SH2D6Q7Z4S9 175 aa5.85□□□□□ -1.47
SF3B3-212ENST00000568539 ATP6V0E2Q8NHE4 81 aa5.85□□□□□ -1.47
SF3B3-212ENST00000568539 PRELID3AQ96N28 172 aa5.85□□□□□ -1.47
SF3B3-212ENST00000568539 STARD9Q9P2P6 4700 aa5.84□□□□□ -1.47
SF3B3-212ENST00000568539 PHOX2AO14813 284 aa5.84□□□□□ -1.47
SF3B3-212ENST00000568539 SUMO2P61956 95 aaKnown RBP5.84□□□□□ -1.47
SF3B3-212ENST00000568539 DAZ4Q86SG3 579 aaKnown RBP5.84□□□□□ -1.47
SF3B3-212ENST00000568539 C20orf78Q9BR46 151 aa5.84□□□□□ -1.47
SF3B3-212ENST00000568539 ALKBH7Q9BT30 221 aaPredicted RBP5.84□□□□□ -1.47
SF3B3-212ENST00000568539 TMEM70Q9BUB7 260 aa5.84□□□□□ -1.47
SF3B3-212ENST00000568539 ST20Q9HBF5 79 aa5.84□□□□□ -1.47
SF3B3-212ENST00000568539 DAZ3Q9NR90 486 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms