RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 SLC25A29Q8N8R3 303 aa11.92□□□□□ -0.5
CMTM3-208ENST00000564247 TRAV26-2A0A0B4J265 109 aa11.91□□□□□ -0.5
CMTM3-208ENST00000564247 D6R8Y8 96 aa11.91□□□□□ -0.5
CMTM3-208ENST00000564247 K7EQD1 137 aa11.91□□□□□ -0.5
CMTM3-208ENST00000564247 M0QY20 66 aa11.91□□□□□ -0.5
CMTM3-208ENST00000564247 PAX4O43316 350 aa11.91□□□□□ -0.5
CMTM3-208ENST00000564247 CRYBA4P53673 196 aa11.91□□□□□ -0.5
CMTM3-208ENST00000564247 RHOHQ15669 191 aa11.91□□□□□ -0.5
CMTM3-208ENST00000564247 PRELID3AQ96N28 172 aa11.91□□□□□ -0.5
CMTM3-208ENST00000564247 HYDINQ4G0P3 5121 aa11.91□□□□□ -0.5
CMTM3-208ENST00000564247 TRBV10-1A0A0K0K1A3 114 aa11.9□□□□□ -0.5
CMTM3-208ENST00000564247 SMKR1H3BMG3 65 aa11.9□□□□□ -0.5
CMTM3-208ENST00000564247 TRGC2P03986 189 aa11.9□□□□□ -0.5
CMTM3-208ENST00000564247 OR10J3Q5JRS4 329 aa11.9□□□□□ -0.5
CMTM3-208ENST00000564247 PHLDA1Q8WV24 401 aaPredicted RBP11.9□□□□□ -0.5
CMTM3-208ENST00000564247 DNAJC30Q96LL9 226 aa11.9□□□□□ -0.5
CMTM3-208ENST00000564247 NIT2Q9NQR4 276 aa11.9□□□□□ -0.5
CMTM3-208ENST00000564247 KLK5Q9Y337 293 aaPredicted RBP11.9□□□□□ -0.5
CMTM3-208ENST00000564247 TNFRSF18Q9Y5U5 241 aa11.9□□□□□ -0.5
CMTM3-208ENST00000564247 NCR2O95944 276 aa11.89□□□□□ -0.51
CMTM3-208ENST00000564247 LAMTOR2Q9Y2Q5 125 aa11.89□□□□□ -0.51
CMTM3-208ENST00000564247 TRAV26-1A0A087WT03 109 aa11.88□□□□□ -0.51
CMTM3-208ENST00000564247 PHOX2AO14813 284 aa11.88□□□□□ -0.51
CMTM3-208ENST00000564247 RPL36AP83881 106 aaKnown RBP11.88□□□□□ -0.51
CMTM3-208ENST00000564247 RPL36ALQ969Q0 106 aaKnown RBP11.88□□□□□ -0.51
CMTM3-208ENST00000564247 A0A0J9YY99 117 aa11.87□□□□□ -0.51
CMTM3-208ENST00000564247 TNFRSF6BO95407 300 aa11.87□□□□□ -0.51
CMTM3-208ENST00000564247 P0DMU3 169 aa11.87□□□□□ -0.51
CMTM3-208ENST00000564247 FAM231AP0DMU4 169 aa11.87□□□□□ -0.51
CMTM3-208ENST00000564247 FAM231CP0DMU5 169 aa11.87□□□□□ -0.51
CMTM3-208ENST00000564247 RPL39LQ96EH5 51 aaKnown RBP11.87□□□□□ -0.51
CMTM3-208ENST00000564247 ALKBH7Q9BT30 221 aaPredicted RBP11.87□□□□□ -0.51
CMTM3-208ENST00000564247 ST20Q9HBF5 79 aa11.87□□□□□ -0.51
CMTM3-208ENST00000564247 TRBV7-3A0A075B6L6 115 aa11.86□□□□□ -0.51
CMTM3-208ENST00000564247 GYPEP15421 78 aa11.86□□□□□ -0.51
CMTM3-208ENST00000564247 SRIP30626 198 aa11.86□□□□□ -0.51
CMTM3-208ENST00000564247 NRACQ8N912 160 aa11.86□□□□□ -0.51
CMTM3-208ENST00000564247 NEXN-AS1Q8NBZ9 246 aa11.86□□□□□ -0.51
CMTM3-208ENST00000564247 ZNRF2Q8NHG8 242 aa11.86□□□□□ -0.51
CMTM3-208ENST00000564247 TRBV6-5A0A0K0K1A5 114 aa11.85□□□□□ -0.51
CMTM3-208ENST00000564247 GAGE12JA6NER3 117 aa11.85□□□□□ -0.51
CMTM3-208ENST00000564247 C1orf196B1AJZ1 125 aa11.85□□□□□ -0.51
CMTM3-208ENST00000564247 H3BNG1 76 aa11.85□□□□□ -0.51
CMTM3-208ENST00000564247 GAS8-AS1O95177 125 aa11.85□□□□□ -0.51
CMTM3-208ENST00000564247 GAGE1Q13065 139 aa11.85□□□□□ -0.51
CMTM3-208ENST00000564247 GAGE4Q13068 117 aa11.85□□□□□ -0.51
CMTM3-208ENST00000564247 GAGE5Q13069 117 aa11.85□□□□□ -0.51
CMTM3-208ENST00000564247 GAGE13Q4V321 117 aa11.85□□□□□ -0.51
CMTM3-208ENST00000564247 LINC00476Q8WZB0 136 aa11.85□□□□□ -0.51
CMTM3-208ENST00000564247 VSIG2Q96IQ7 327 aa11.85□□□□□ -0.51
CMTM3-208ENST00000564247 C20orf78Q9BR46 151 aa11.85□□□□□ -0.51
CMTM3-208ENST00000564247 NPYP01303 97 aa11.84□□□□□ -0.51
CMTM3-208ENST00000564247 MRPL23Q16540 153 aaKnown RBP11.84□□□□□ -0.51
CMTM3-208ENST00000564247 MAP1LC3AQ9H492 121 aa11.84□□□□□ -0.51
CMTM3-208ENST00000564247 ICOSQ9Y6W8 199 aa11.84□□□□□ -0.51
CMTM3-208ENST00000564247 LOC100131303A0A0U1RQF7 123 aa11.83□□□□□ -0.52
CMTM3-208ENST00000564247 VCYO14598 125 aa11.83□□□□□ -0.52
CMTM3-208ENST00000564247 SUMO2P61956 95 aaKnown RBP11.83□□□□□ -0.52
CMTM3-208ENST00000564247 SH2D6Q7Z4S9 175 aa11.83□□□□□ -0.52
CMTM3-208ENST00000564247 Q9UF83 564 aa11.83□□□□□ -0.52
CMTM3-208ENST00000564247 LOC389332A0A1B0GUA5 103 aa11.82□□□□□ -0.52
CMTM3-208ENST00000564247 SDHAF1A6NFY7 115 aa11.82□□□□□ -0.52
CMTM3-208ENST00000564247 PMCHP20382 165 aa11.82□□□□□ -0.52
CMTM3-208ENST00000564247 VPS13DQ5THJ4 4388 aa11.82□□□□□ -0.52
CMTM3-208ENST00000564247 IGLL5B9A064 214 aa11.81□□□□□ -0.52
CMTM3-208ENST00000564247 NUDT3O95989 172 aa11.81□□□□□ -0.52
CMTM3-208ENST00000564247 UBE2D3P61077 147 aa11.81□□□□□ -0.52
CMTM3-208ENST00000564247 UBE2D2P62837 147 aa11.81□□□□□ -0.52
CMTM3-208ENST00000564247 DAZ4Q86SG3 579 aaKnown RBP11.81□□□□□ -0.52
CMTM3-208ENST00000564247 C15orf53Q8NAA6 179 aa11.81□□□□□ -0.52
CMTM3-208ENST00000564247 PRSS3P2Q8NHM4 247 aa11.81□□□□□ -0.52
CMTM3-208ENST00000564247 DAZ3Q9NR90 486 aaKnown RBP11.81□□□□□ -0.52
CMTM3-208ENST00000564247 PRSS47A8MTI9 375 aa11.8□□□□□ -0.52
CMTM3-208ENST00000564247 I3L3M4 83 aa11.8□□□□□ -0.52
CMTM3-208ENST00000564247 LY6G6CO95867 125 aa11.8□□□□□ -0.52
CMTM3-208ENST00000564247 POLR2KP53803 58 aaKnown RBP11.8□□□□□ -0.52
CMTM3-208ENST00000564247 TCTAP57738 103 aa11.8□□□□□ -0.52
CMTM3-208ENST00000564247 RAB5BP61020 215 aa11.8□□□□□ -0.52
CMTM3-208ENST00000564247 RPL32P62910 135 aaKnown RBP11.8□□□□□ -0.52
CMTM3-208ENST00000564247 ATP6V0E2Q8NHE4 81 aa11.8□□□□□ -0.52
CMTM3-208ENST00000564247 TMEM70Q9BUB7 260 aa11.8□□□□□ -0.52
CMTM3-208ENST00000564247 NEGR1Q7Z3B1 354 aa11.79□□□□□ -0.52
CMTM3-208ENST00000564247 BAGE3Q86Y29 109 aa11.79□□□□□ -0.52
CMTM3-208ENST00000564247 C18orf32Q8TCD1 76 aa11.79□□□□□ -0.52
CMTM3-208ENST00000564247 KIR2DL4Q99706 377 aa11.79□□□□□ -0.52
CMTM3-208ENST00000564247 SMIM2Q9BVW6 85 aa11.79□□□□□ -0.52
CMTM3-208ENST00000564247 NXT2Q9NPJ8 142 aaKnown RBP11.79□□□□□ -0.52
CMTM3-208ENST00000564247 TRBV27A0A0K0K1C4 114 aa11.78□□□□□ -0.52
CMTM3-208ENST00000564247 TMEM97Q5BJF2 176 aa11.78□□□□□ -0.52
CMTM3-208ENST00000564247 Q8N8P6 123 aa11.78□□□□□ -0.52
CMTM3-208ENST00000564247 A0A096LPF7 62 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 IGHV3-38A0A0C4DH36 116 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 TCAPO15273 167 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 HIST1H2BKO60814 126 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 HIST1H2BJP06899 126 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 HIST1H2BOP23527 126 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 FCER1GP30273 86 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 HIST1H2BBP33778 126 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 HIST1H2BDP58876 126 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 HIST1H2BCP62807 126 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms