RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 LAMTOR2Q9Y2Q5 125 aa10.37□□□□□ -0.75
CDH11-207ENST00000563255 TRBV10-1A0A0K0K1A3 114 aa10.36□□□□□ -0.75
CDH11-207ENST00000563255 D6R8Y8 96 aa10.36□□□□□ -0.75
CDH11-207ENST00000563255 F5H768 121 aa10.36□□□□□ -0.75
CDH11-207ENST00000563255 K7EQD1 137 aa10.36□□□□□ -0.75
CDH11-207ENST00000563255 CRYBA4P53673 196 aa10.36□□□□□ -0.75
CDH11-207ENST00000563255 NIT2Q9NQR4 276 aa10.36□□□□□ -0.75
CDH11-207ENST00000563255 TRAV10A0A0B4J240 114 aa10.35□□□□□ -0.75
CDH11-207ENST00000563255 SMKR1H3BMG3 65 aa10.35□□□□□ -0.75
CDH11-207ENST00000563255 GAS8-AS1O95177 125 aa10.35□□□□□ -0.75
CDH11-207ENST00000563255 RHOHQ15669 191 aa10.35□□□□□ -0.75
CDH11-207ENST00000563255 NRACQ8N912 160 aa10.35□□□□□ -0.75
CDH11-207ENST00000563255 DNAJC30Q96LL9 226 aa10.35□□□□□ -0.75
CDH11-207ENST00000563255 PRELID3AQ96N28 172 aa10.35□□□□□ -0.75
CDH11-207ENST00000563255 PRADC1Q9BSG0 188 aa10.35□□□□□ -0.75
CDH11-207ENST00000563255 ALKBH7Q9BT30 221 aaPredicted RBP10.35□□□□□ -0.75
CDH11-207ENST00000563255 DEFB131BA0A096LNP1 70 aa10.34□□□□□ -0.75
CDH11-207ENST00000563255 TRBV6-5A0A0K0K1A5 114 aa10.34□□□□□ -0.75
CDH11-207ENST00000563255 NCR2O95944 276 aa10.34□□□□□ -0.75
CDH11-207ENST00000563255 HTN3P15516 51 aa10.34□□□□□ -0.75
CDH11-207ENST00000563255 PRSS47A8MTI9 375 aa10.33□□□□□ -0.76
CDH11-207ENST00000563255 H3BNG1 76 aa10.33□□□□□ -0.76
CDH11-207ENST00000563255 PAX4O43316 350 aa10.33□□□□□ -0.76
CDH11-207ENST00000563255 TNFRSF6BO95407 300 aa10.33□□□□□ -0.76
CDH11-207ENST00000563255 SRIP30626 198 aa10.33□□□□□ -0.76
CDH11-207ENST00000563255 OR10J3Q5JRS4 329 aa10.33□□□□□ -0.76
CDH11-207ENST00000563255 NEXN-AS1Q8NBZ9 246 aa10.33□□□□□ -0.76
CDH11-207ENST00000563255 RPL39LQ96EH5 51 aaKnown RBP10.33□□□□□ -0.76
CDH11-207ENST00000563255 TRBV7-3A0A075B6L6 115 aa10.32□□□□□ -0.76
CDH11-207ENST00000563255 NPYP01303 97 aa10.32□□□□□ -0.76
CDH11-207ENST00000563255 P0DMU3 169 aa10.32□□□□□ -0.76
CDH11-207ENST00000563255 FAM231AP0DMU4 169 aa10.32□□□□□ -0.76
CDH11-207ENST00000563255 FAM231CP0DMU5 169 aa10.32□□□□□ -0.76
CDH11-207ENST00000563255 VSIG2Q96IQ7 327 aa10.32□□□□□ -0.76
CDH11-207ENST00000563255 C20orf78Q9BR46 151 aa10.32□□□□□ -0.76
CDH11-207ENST00000563255 TRAV26-1A0A087WT03 109 aa10.31□□□□□ -0.76
CDH11-207ENST00000563255 C1orf196B1AJZ1 125 aa10.31□□□□□ -0.76
CDH11-207ENST00000563255 RPL32P62910 135 aaKnown RBP10.31□□□□□ -0.76
CDH11-207ENST00000563255 RPL36AP83881 106 aaKnown RBP10.31□□□□□ -0.76
CDH11-207ENST00000563255 RPL36ALQ969Q0 106 aaKnown RBP10.31□□□□□ -0.76
CDH11-207ENST00000563255 ST20Q9HBF5 79 aa10.31□□□□□ -0.76
CDH11-207ENST00000563255 Q9UF83 564 aa10.31□□□□□ -0.76
CDH11-207ENST00000563255 TNFRSF18Q9Y5U5 241 aa10.31□□□□□ -0.76
CDH11-207ENST00000563255 POLR2KP53803 58 aaKnown RBP10.3□□□□□ -0.76
CDH11-207ENST00000563255 SUMO2P61956 95 aaKnown RBP10.3□□□□□ -0.76
CDH11-207ENST00000563255 ZNRF2Q8NHG8 242 aa10.3□□□□□ -0.76
CDH11-207ENST00000563255 C18orf32Q8TCD1 76 aa10.3□□□□□ -0.76
CDH11-207ENST00000563255 PHLDA1Q8WV24 401 aaPredicted RBP10.3□□□□□ -0.76
CDH11-207ENST00000563255 MAP1LC3AQ9H492 121 aa10.3□□□□□ -0.76
CDH11-207ENST00000563255 A0A0J9YY99 117 aa10.29□□□□□ -0.76
CDH11-207ENST00000563255 LINC00694P0DN24 101 aa10.29□□□□□ -0.76
CDH11-207ENST00000563255 GYPEP15421 78 aa10.29□□□□□ -0.76
CDH11-207ENST00000563255 LOC100131303A0A0U1RQF7 123 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 GAGE12JA6NER3 117 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 SDHAF1A6NFY7 115 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 HIST1H2BKO60814 126 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 HIST1H2BJP06899 126 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 HIST1H2BOP23527 126 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 HIST1H2BBP33778 126 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 HIST1H2BDP58876 126 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 UBE2D3P61077 147 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 HIST1H2BCP62807 126 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 UBE2D2P62837 147 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 Q0VG73 95 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 GAGE1Q13065 139 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 GAGE4Q13068 117 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 GAGE5Q13069 117 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 MRPL23Q16540 153 aaKnown RBP10.28□□□□□ -0.76
CDH11-207ENST00000563255 HIST2H2BEQ16778 126 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 GAGE13Q4V321 117 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.28□□□□□ -0.76
CDH11-207ENST00000563255 HIST1H2BHQ93079 126 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 HIST1H2BNQ99877 126 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 HIST1H2BMQ99879 126 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 TMEM70Q9BUB7 260 aa10.28□□□□□ -0.76
CDH11-207ENST00000563255 PLECQ15149 4684 aaKnown RBP10.28□□□□□ -0.76
CDH11-207ENST00000563255 TRBV27A0A0K0K1C4 114 aa10.27□□□□□ -0.77
CDH11-207ENST00000563255 VCYO14598 125 aa10.27□□□□□ -0.77
CDH11-207ENST00000563255 RAB5BP61020 215 aa10.27□□□□□ -0.77
CDH11-207ENST00000563255 SH2D6Q7Z4S9 175 aa10.27□□□□□ -0.77
CDH11-207ENST00000563255 DAZ4Q86SG3 579 aaKnown RBP10.27□□□□□ -0.77
CDH11-207ENST00000563255 SMIM2Q9BVW6 85 aa10.27□□□□□ -0.77
CDH11-207ENST00000563255 DAZ3Q9NR90 486 aaKnown RBP10.27□□□□□ -0.77
CDH11-207ENST00000563255 ICOSQ9Y6W8 199 aa10.27□□□□□ -0.77
CDH11-207ENST00000563255 ALMS1Q8TCU4 4167 aa10.27□□□□□ -0.77
CDH11-207ENST00000563255 IGLV2-18A0A075B6J9 118 aa10.26□□□□□ -0.77
CDH11-207ENST00000563255 A0A096LPF7 62 aa10.26□□□□□ -0.77
CDH11-207ENST00000563255 I3L3M4 83 aa10.26□□□□□ -0.77
CDH11-207ENST00000563255 Q8N8P6 123 aa10.26□□□□□ -0.77
CDH11-207ENST00000563255 C15orf53Q8NAA6 179 aa10.26□□□□□ -0.77
CDH11-207ENST00000563255 NXT2Q9NPJ8 142 aaKnown RBP10.26□□□□□ -0.77
CDH11-207ENST00000563255 LOC389332A0A1B0GUA5 103 aa10.25□□□□□ -0.77
CDH11-207ENST00000563255 NUPR2A6NF83 97 aa10.25□□□□□ -0.77
CDH11-207ENST00000563255 K7EMI3 77 aa10.25□□□□□ -0.77
CDH11-207ENST00000563255 PMCHP20382 165 aa10.25□□□□□ -0.77
CDH11-207ENST00000563255 IFI27P40305 119 aaPredicted RBP10.25□□□□□ -0.77
CDH11-207ENST00000563255 IQCJQ1A5X6 159 aa10.25□□□□□ -0.77
CDH11-207ENST00000563255 CEMP1Q6PRD7 247 aaPredicted RBP10.25□□□□□ -0.77
CDH11-207ENST00000563255 ATP6V0E2Q8NHE4 81 aa10.25□□□□□ -0.77
CDH11-207ENST00000563255 PRSS3P2Q8NHM4 247 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms