RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 PACRGQ96M98 296 aaPredicted RBP9.88□□□□□ -0.83
CLK3-209ENST00000562670 SMIM2Q9BVW6 85 aa9.88□□□□□ -0.83
CLK3-209ENST00000562670 IGLV2-18A0A075B6J9 118 aa9.87□□□□□ -0.83
CLK3-209ENST00000562670 K7EQD1 137 aa9.87□□□□□ -0.83
CLK3-209ENST00000562670 DAD1P61803 113 aa9.87□□□□□ -0.83
CLK3-209ENST00000562670 SNRPEP62304 92 aaKnown RBP9.87□□□□□ -0.83
CLK3-209ENST00000562670 HIST3H2BBQ8N257 126 aa9.87□□□□□ -0.83
CLK3-209ENST00000562670 Q8N8P6 123 aa9.87□□□□□ -0.83
CLK3-209ENST00000562670 RPL39LQ96EH5 51 aaKnown RBP9.87□□□□□ -0.83
CLK3-209ENST00000562670 URB1-AS1Q96HZ7 61 aa9.87□□□□□ -0.83
CLK3-209ENST00000562670 ST20Q9HBF5 79 aa9.87□□□□□ -0.83
CLK3-209ENST00000562670 AP5S1Q9NUS5 200 aa9.87□□□□□ -0.83
CLK3-209ENST00000562670 CELA1Q9UNI1 258 aa9.87□□□□□ -0.83
CLK3-209ENST00000562670 IGHV3-73A0A0B4J1V6 119 aa9.86□□□□□ -0.83
CLK3-209ENST00000562670 TRBV27A0A0K0K1C4 114 aa9.86□□□□□ -0.83
CLK3-209ENST00000562670 LINC00614P0C842 121 aa9.86□□□□□ -0.83
CLK3-209ENST00000562670 DEFB130BP0DP73 79 aa9.86□□□□□ -0.83
CLK3-209ENST00000562670 DEFB130AP0DP74 79 aa9.86□□□□□ -0.83
CLK3-209ENST00000562670 POLR2KP53803 58 aaKnown RBP9.86□□□□□ -0.83
CLK3-209ENST00000562670 FHL2Q14192 279 aa9.86□□□□□ -0.83
CLK3-209ENST00000562670 FA2HQ7L5A8 372 aa9.86□□□□□ -0.83
CLK3-209ENST00000562670 PRSS3P2Q8NHM4 247 aa9.86□□□□□ -0.83
CLK3-209ENST00000562670 TMEM70Q9BUB7 260 aa9.86□□□□□ -0.83
CLK3-209ENST00000562670 ZMAT4Q9H898 229 aa9.86□□□□□ -0.83
CLK3-209ENST00000562670 DEFB4AO15263 64 aa9.85□□□□□ -0.83
CLK3-209ENST00000562670 TCAPO15273 167 aa9.85□□□□□ -0.83
CLK3-209ENST00000562670 IFI27P40305 119 aaPredicted RBP9.85□□□□□ -0.83
CLK3-209ENST00000562670 RHOHQ15669 191 aa9.85□□□□□ -0.83
CLK3-209ENST00000562670 Q6ZSN1 163 aa9.85□□□□□ -0.83
CLK3-209ENST00000562670 NIT1Q86X76 327 aa9.85□□□□□ -0.83
CLK3-209ENST00000562670 TRGV4A0A0C4DH28 118 aa9.84□□□□□ -0.83
CLK3-209ENST00000562670 SDHAF1A6NFY7 115 aa9.84□□□□□ -0.83
CLK3-209ENST00000562670 HSBP1O75506 76 aa9.84□□□□□ -0.83
CLK3-209ENST00000562670 ATP5G1P05496 136 aa9.84□□□□□ -0.83
CLK3-209ENST00000562670 RNASEKQ6P5S7 137 aaKnown RBP9.84□□□□□ -0.83
CLK3-209ENST00000562670 SLC25A29Q8N8R3 303 aa9.84□□□□□ -0.83
CLK3-209ENST00000562670 NEXN-AS1Q8NBZ9 246 aa9.84□□□□□ -0.83
CLK3-209ENST00000562670 LOC389332A0A1B0GUA5 103 aa9.83□□□□□ -0.84
CLK3-209ENST00000562670 VCYO14598 125 aa9.83□□□□□ -0.84
CLK3-209ENST00000562670 NUPR1O60356 82 aa9.83□□□□□ -0.84
CLK3-209ENST00000562670 PRO0255Q9UI72 69 aa9.83□□□□□ -0.84
CLK3-209ENST00000562670 HUWE1Q7Z6Z7 4374 aaKnown RBP9.83□□□□□ -0.84
CLK3-209ENST00000562670 TRBV7-3A0A075B6L6 115 aa9.82□□□□□ -0.84
CLK3-209ENST00000562670 A0A0J9YWU9 116 aa9.82□□□□□ -0.84
CLK3-209ENST00000562670 NHLRC4P0CG21 123 aaPredicted RBP9.82□□□□□ -0.84
CLK3-209ENST00000562670 LINC00694P0DN24 101 aa9.82□□□□□ -0.84
CLK3-209ENST00000562670 S100A2P29034 98 aa9.82□□□□□ -0.84
CLK3-209ENST00000562670 RPL36AP83881 106 aaKnown RBP9.82□□□□□ -0.84
CLK3-209ENST00000562670 RPL36ALQ969Q0 106 aaKnown RBP9.82□□□□□ -0.84
CLK3-209ENST00000562670 TMEM18Q96B42 140 aa9.82□□□□□ -0.84
CLK3-209ENST00000562670 KIR2DL4Q99706 377 aa9.82□□□□□ -0.84
CLK3-209ENST00000562670 PRADC1Q9BSG0 188 aa9.82□□□□□ -0.84
CLK3-209ENST00000562670 TNFRSF18Q9Y5U5 241 aa9.82□□□□□ -0.84
CLK3-209ENST00000562670 IFITM10A6NMD0 228 aa9.81□□□□□ -0.84
CLK3-209ENST00000562670 P0DMU3 169 aa9.81□□□□□ -0.84
CLK3-209ENST00000562670 FAM231AP0DMU4 169 aa9.81□□□□□ -0.84
CLK3-209ENST00000562670 FAM231CP0DMU5 169 aa9.81□□□□□ -0.84
CLK3-209ENST00000562670 AMTP48728 403 aa9.81□□□□□ -0.84
CLK3-209ENST00000562670 CRYBA4P53673 196 aa9.81□□□□□ -0.84
CLK3-209ENST00000562670 C12orf74Q32Q52 190 aa9.81□□□□□ -0.84
CLK3-209ENST00000562670 ORMDL2Q53FV1 153 aa9.81□□□□□ -0.84
CLK3-209ENST00000562670 HIST1H2BLQ99880 126 aa9.81□□□□□ -0.84
CLK3-209ENST00000562670 HHLA3Q9XRX5 114 aa9.81□□□□□ -0.84
CLK3-209ENST00000562670 DNAH9Q9NYC9 4486 aa9.81□□□□□ -0.84
CLK3-209ENST00000562670 TENM3Q9P273 2699 aa9.8□□□□□ -0.84
CLK3-209ENST00000562670 IGHV1-24A0A0C4DH33 117 aa9.8□□□□□ -0.84
CLK3-209ENST00000562670 LOC105371267A0A1B0GV96 52 aa9.8□□□□□ -0.84
CLK3-209ENST00000562670 LINC01549A6NIU2 74 aa9.8□□□□□ -0.84
CLK3-209ENST00000562670 I3L3M4 83 aa9.8□□□□□ -0.84
CLK3-209ENST00000562670 UBE2D3P61077 147 aa9.8□□□□□ -0.84
CLK3-209ENST00000562670 UBE2D2P62837 147 aa9.8□□□□□ -0.84
CLK3-209ENST00000562670 LAGE3Q14657 143 aa9.8□□□□□ -0.84
CLK3-209ENST00000562670 DAZ4Q86SG3 579 aaKnown RBP9.8□□□□□ -0.84
CLK3-209ENST00000562670 DAZ3Q9NR90 486 aaKnown RBP9.8□□□□□ -0.84
CLK3-209ENST00000562670 A0A096LNJ9 63 aa9.79□□□□□ -0.84
CLK3-209ENST00000562670 HBDP02042 147 aa9.79□□□□□ -0.84
CLK3-209ENST00000562670 G0S2P27469 103 aa9.79□□□□□ -0.84
CLK3-209ENST00000562670 PDZD11Q5EBL8 140 aa9.79□□□□□ -0.84
CLK3-209ENST00000562670 MEGF8Q7Z7M0 2845 aa9.78□□□□□ -0.84
CLK3-209ENST00000562670 H3BNG1 76 aa9.78□□□□□ -0.84
CLK3-209ENST00000562670 TSHBP01222 138 aa9.78□□□□□ -0.84
CLK3-209ENST00000562670 FCER1GP30273 86 aa9.78□□□□□ -0.84
CLK3-209ENST00000562670 C11orf45Q8TAV5 145 aa9.78□□□□□ -0.84
CLK3-209ENST00000562670 Q9UF83 564 aa9.78□□□□□ -0.84
CLK3-209ENST00000562670 FABP4P15090 132 aa9.77□□□□□ -0.85
CLK3-209ENST00000562670 DEFA6Q01524 100 aa9.77□□□□□ -0.85
CLK3-209ENST00000562670 ZNRF2Q8NHG8 242 aa9.77□□□□□ -0.85
CLK3-209ENST00000562670 TRAV26-1A0A087WT03 109 aa9.76□□□□□ -0.85
CLK3-209ENST00000562670 PAX4O43316 350 aa9.76□□□□□ -0.85
CLK3-209ENST00000562670 TMEM97Q5BJF2 176 aa9.76□□□□□ -0.85
CLK3-209ENST00000562670 Q6ZTC4 211 aa9.76□□□□□ -0.85
CLK3-209ENST00000562670 FAM19A2Q8N3H0 131 aa9.76□□□□□ -0.85
CLK3-209ENST00000562670 GTSF1LQ9H1H1 148 aa9.76□□□□□ -0.85
CLK3-209ENST00000562670 GAGE12JA6NER3 117 aa9.75□□□□□ -0.85
CLK3-209ENST00000562670 F5H768 121 aa9.75□□□□□ -0.85
CLK3-209ENST00000562670 GAGE1Q13065 139 aa9.75□□□□□ -0.85
CLK3-209ENST00000562670 GAGE4Q13068 117 aa9.75□□□□□ -0.85
CLK3-209ENST00000562670 GAGE5Q13069 117 aa9.75□□□□□ -0.85
CLK3-209ENST00000562670 COTL1Q14019 142 aa9.75□□□□□ -0.85
CLK3-209ENST00000562670 GAGE13Q4V321 117 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms