RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 NHLRC2Q8NBF2 726 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 TYMSOSQ8TAI1 123 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 C9orf85Q96MD7 179 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 C18orf15Q96N68 181 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 CHCHD5Q9BSY4 110 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 TMEM208Q9BTX3 173 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 PRO0461Q9UI25 63 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 TENM2Q9NT68 2774 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 NACAE9PAV3 2078 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 FRAS1Q86XX4 4008 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 DYNC1H1Q14204 4646 aaKnown RBP3.12□□□□□ -1.91
SMG1-206ENST00000562668 FABP5P3A8MUU1 101 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 KRBOX1C9JBD0 128 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 C9JCJ5 164 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 TMEM250H0YL14 139 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 PDE6DO43924 150 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 SH2D1AO60880 128 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 IFNA1P01562 189 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 SPART-AS1P0CW21 52 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 HTN1P15515 57 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 EMP1P54849 157 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 UBE2G1P62253 170 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 SRSF9Q13242 221 aaKnown RBP eCLIP3.12□□□□□ -1.91
SMG1-206ENST00000562668 CENPWQ5EE01 88 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 CLLU1Q5K131 121 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 CEMP1Q6PRD7 247 aaPredicted RBP3.12□□□□□ -1.91
SMG1-206ENST00000562668 Q6ZTI0 123 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 BAGE2Q86Y30 109 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 KRTAP11-1Q8IUC1 163 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 PTH2Q96A98 100 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 NDFIP1Q9BT67 221 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 NOP10Q9NPE3 64 aaKnown RBP3.12□□□□□ -1.91
SMG1-206ENST00000562668 APLNQ9ULZ1 77 aa3.12□□□□□ -1.91
SMG1-206ENST00000562668 TIMM8BQ9Y5J9 83 aaPredicted RBP3.12□□□□□ -1.91
SMG1-206ENST00000562668 DNAH5Q8TE73 4624 aa3.11□□□□□ -1.91
SMG1-206ENST00000562668 IGLV4-3A0A075B6K6 122 aa3.11□□□□□ -1.91
SMG1-206ENST00000562668 TEX48A0A1B0GUV7 120 aa3.11□□□□□ -1.91
SMG1-206ENST00000562668 CXCL1P09341 107 aa3.11□□□□□ -1.91
SMG1-206ENST00000562668 RPL19P84098 196 aaKnown RBP3.11□□□□□ -1.91
SMG1-206ENST00000562668 LGALS9BQ3B8N2 356 aa3.11□□□□□ -1.91
SMG1-206ENST00000562668 FAM162BQ5T6X4 162 aa3.11□□□□□ -1.91
SMG1-206ENST00000562668 UFSP1Q6NVU6 142 aa3.11□□□□□ -1.91
SMG1-206ENST00000562668 FAM159AQ6UWV7 190 aa3.11□□□□□ -1.91
SMG1-206ENST00000562668 OCC1Q8TAD7 63 aa3.11□□□□□ -1.91
SMG1-206ENST00000562668 SMIM12Q96EX1 92 aa3.11□□□□□ -1.91
SMG1-206ENST00000562668 KCNS1Q96KK3 526 aa3.11□□□□□ -1.91
SMG1-206ENST00000562668 MED9Q9NWA0 146 aa3.11□□□□□ -1.91
SMG1-206ENST00000562668 MRPL16Q9NX20 251 aaKnown RBP3.11□□□□□ -1.91
SMG1-206ENST00000562668 PKD1P98161 4303 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 DEFB131BA0A096LNP1 70 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 TRAV10A0A0B4J240 114 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 GRIFINA4D1Z8 144 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 NUPR2A6NF83 97 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 M0R036 132 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 RS1O15537 224 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 SNAI2O43623 268 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 NXPH4O95158 308 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 IGLC6P0CF74 106 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 DEFB130BP0DP73 79 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 DEFB130AP0DP74 79 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 GNG4P50150 75 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 DAD1P61803 113 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 OR5I1Q13606 314 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 VSIG2Q96IQ7 327 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 SPXQ9BT56 116 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 SMDT1Q9H4I9 107 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 IL36BQ9NZH7 164 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 NAGKQ9UJ70 344 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 LY96Q9Y6Y9 160 aa3.1□□□□□ -1.91
SMG1-206ENST00000562668 TMSB15BA0A087X1C1 80 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 TRGV1A0A0A0MS02 117 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 B4DEV8 164 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 H3BVH4 76 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 M0R2P5 195 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 ORM1P02763 201 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 ATP5G1P05496 136 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 ARMS2P0C7Q2 107 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 LINC00315P59091 139 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 RPL23P62829 140 aaKnown RBP3.09□□□□□ -1.91
SMG1-206ENST00000562668 FAM231DQ6ZW35 169 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 LINC01551Q86U37 167 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 FAM210BQ96KR6 192 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 NDUFAF3Q9BU61 184 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 SAMD10Q9BYL1 202 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 EIF5A2Q9GZV4 153 aaKnown RBP3.09□□□□□ -1.91
SMG1-206ENST00000562668 RNASE7Q9H1E1 156 aaKnown RBP3.09□□□□□ -1.91
SMG1-206ENST00000562668 JPT2Q9H910 190 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 KIF25-AS1Q9Y6Z4 181 aa3.09□□□□□ -1.91
SMG1-206ENST00000562668 BIRC6Q9NR09 4857 aa3.09□□□□□ -1.92
SMG1-206ENST00000562668 TRAV4A0A0B4J268 109 aa3.08□□□□□ -1.92
SMG1-206ENST00000562668 LCE6AA0A183 80 aa3.08□□□□□ -1.92
SMG1-206ENST00000562668 LINC00862A6NCI5 91 aa3.08□□□□□ -1.92
SMG1-206ENST00000562668 ZNF727A8MUV8 499 aa3.08□□□□□ -1.92
SMG1-206ENST00000562668 IGLL5B9A064 214 aa3.08□□□□□ -1.92
SMG1-206ENST00000562668 H3BNG1 76 aa3.08□□□□□ -1.92
SMG1-206ENST00000562668 CRYGDP07320 174 aa3.08□□□□□ -1.92
SMG1-206ENST00000562668 OR5AL1P0C617 328 aa3.08□□□□□ -1.92
SMG1-206ENST00000562668 SFTA3P0C7M3 94 aa3.08□□□□□ -1.92
SMG1-206ENST00000562668 LINC00694P0DN24 101 aa3.08□□□□□ -1.92
SMG1-206ENST00000562668 GZMBP10144 247 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms