RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 GATA1P15976 413 aaPredicted RBP4.75□□□□□ -1.65
CAPN3-210ENST00000561817 CMC4P56277 68 aaPredicted RBP4.75□□□□□ -1.65
CAPN3-210ENST00000561817 KRTAP10-2P60368 255 aa4.75□□□□□ -1.65
CAPN3-210ENST00000561817 SUMO2P61956 95 aaKnown RBP4.75□□□□□ -1.65
CAPN3-210ENST00000561817 SPANXN1Q5VSR9 72 aa4.75□□□□□ -1.65
CAPN3-210ENST00000561817 C1orf158Q8N1D5 194 aa4.75□□□□□ -1.65
CAPN3-210ENST00000561817 FAM19A2Q8N3H0 131 aa4.75□□□□□ -1.65
CAPN3-210ENST00000561817 WFDC9Q8NEX5 89 aa4.75□□□□□ -1.65
CAPN3-210ENST00000561817 C20orf144Q9BQM9 153 aa4.75□□□□□ -1.65
CAPN3-210ENST00000561817 Q9H8V8 135 aa4.75□□□□□ -1.65
CAPN3-210ENST00000561817 ANK2Q01484 3957 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 IGHV1-24A0A0C4DH33 117 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 M0R381 172 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 PRM2P04554 102 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 S100A4P26447 101 aaKnown RBP4.74□□□□□ -1.65
CAPN3-210ENST00000561817 CKS2P33552 79 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 AMTP48728 403 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 GAGE2BQ13066 116 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 GAGE2EQ4V326 116 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 GAGE2AQ6NT46 116 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 C11orf72Q8NBR9 251 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 IL17DQ8TAD2 202 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 PTH2Q96A98 100 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 WFDC10AQ9H1F0 79 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 JPT2Q9H910 190 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 GAGE2DQ9UEU5 116 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 LAMTOR2Q9Y2Q5 125 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 PHLDA3Q9Y5J5 127 aa4.74□□□□□ -1.65
CAPN3-210ENST00000561817 TIMM8BQ9Y5J9 83 aaPredicted RBP4.74□□□□□ -1.65
CAPN3-210ENST00000561817 NOTCH3Q9UM47 2321 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 TRGV11A0A075B6L2 103 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 TRAV26-2A0A0B4J265 109 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 INSP01308 110 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 CRYGDP07320 174 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 PMCHP20382 165 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 IFI27P40305 119 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-210ENST00000561817 INSL3P51460 131 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 UFSP1Q6NVU6 142 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 LINC00173Q6ZV60 143 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 C14orf178Q8N769 122 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-210ENST00000561817 CSNK1G2-AS1Q8NCQ2 148 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 MRAPQ8TCY5 172 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 RASL10AQ92737 203 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 MRAP2Q96G30 205 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 SAMD10Q9BYL1 202 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 DPH3P1Q9H4G8 78 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 NIT2Q9NQR4 276 aa4.73□□□□□ -1.65
CAPN3-210ENST00000561817 M0QXV9 152 aa4.72□□□□□ -1.65
CAPN3-210ENST00000561817 HSBP1O75506 76 aa4.72□□□□□ -1.65
CAPN3-210ENST00000561817 C3orf79P0CE67 100 aa4.72□□□□□ -1.65
CAPN3-210ENST00000561817 PMCHL1Q16048 86 aa4.72□□□□□ -1.65
CAPN3-210ENST00000561817 PIK3CD-AS1Q5SR53 167 aa4.72□□□□□ -1.65
CAPN3-210ENST00000561817 C9orf66Q5T8R8 295 aa4.72□□□□□ -1.65
CAPN3-210ENST00000561817 SMIM15Q7Z3B0 74 aa4.72□□□□□ -1.65
CAPN3-210ENST00000561817 SPATA12Q7Z6I5 190 aa4.72□□□□□ -1.65
CAPN3-210ENST00000561817 AP1S3Q96PC3 154 aa4.72□□□□□ -1.65
CAPN3-210ENST00000561817 XCL2Q9UBD3 114 aa4.72□□□□□ -1.65
CAPN3-210ENST00000561817 NACAE9PAV3 2078 aa4.72□□□□□ -1.65
CAPN3-210ENST00000561817 LOC389332A0A1B0GUA5 103 aa4.71□□□□□ -1.66
CAPN3-210ENST00000561817 PLAC8L1A1L4L8 177 aa4.71□□□□□ -1.66
CAPN3-210ENST00000561817 AZU1P20160 251 aa4.71□□□□□ -1.66
CAPN3-210ENST00000561817 RPL32P62910 135 aaKnown RBP4.71□□□□□ -1.66
CAPN3-210ENST00000561817 SUMO4Q6EEV6 95 aa4.71□□□□□ -1.66
CAPN3-210ENST00000561817 MORN3Q6PF18 240 aaPredicted RBP4.71□□□□□ -1.66
CAPN3-210ENST00000561817 TEX43Q6ZNM6 134 aa4.71□□□□□ -1.66
CAPN3-210ENST00000561817 FA2HQ7L5A8 372 aa4.71□□□□□ -1.66
CAPN3-210ENST00000561817 Q8N8P6 123 aa4.71□□□□□ -1.66
CAPN3-210ENST00000561817 PRSS3P2Q8NHM4 247 aa4.71□□□□□ -1.66
CAPN3-210ENST00000561817 RPL39LQ96EH5 51 aaKnown RBP4.71□□□□□ -1.66
CAPN3-210ENST00000561817 MAP1LC3AQ9H492 121 aa4.71□□□□□ -1.66
CAPN3-210ENST00000561817 EDA2RQ9HAV5 297 aa4.71□□□□□ -1.66
CAPN3-210ENST00000561817 PLA2G2DQ9UNK4 145 aa4.71□□□□□ -1.66
CAPN3-210ENST00000561817 DNHD1Q96M86 4753 aa4.71□□□□□ -1.66
CAPN3-210ENST00000561817 TRBV6-5A0A0K0K1A5 114 aa4.7□□□□□ -1.66
CAPN3-210ENST00000561817 M0QY20 66 aa4.7□□□□□ -1.66
CAPN3-210ENST00000561817 M0R2P5 195 aa4.7□□□□□ -1.66
CAPN3-210ENST00000561817 POLR2KP53803 58 aaKnown RBP4.7□□□□□ -1.66
CAPN3-210ENST00000561817 ZNF415Q09FC8 603 aa4.7□□□□□ -1.66
CAPN3-210ENST00000561817 ZNF876PQ49A33 203 aa4.7□□□□□ -1.66
CAPN3-210ENST00000561817 ZNF705AQ6ZN79 300 aaPredicted RBP4.7□□□□□ -1.66
CAPN3-210ENST00000561817 LINC01587Q99440 93 aa4.7□□□□□ -1.66
CAPN3-210ENST00000561817 SPATA25Q9BR10 227 aa4.7□□□□□ -1.66
CAPN3-210ENST00000561817 C20orf78Q9BR46 151 aa4.7□□□□□ -1.66
CAPN3-210ENST00000561817 NXT2Q9NPJ8 142 aaKnown RBP4.7□□□□□ -1.66
CAPN3-210ENST00000561817 LEPROTL1O95214 131 aa4.69□□□□□ -1.66
CAPN3-210ENST00000561817 MGPP08493 103 aa4.69□□□□□ -1.66
CAPN3-210ENST00000561817 RPL35AP18077 110 aaKnown RBP4.69□□□□□ -1.66
CAPN3-210ENST00000561817 FCER1GP30273 86 aa4.69□□□□□ -1.66
CAPN3-210ENST00000561817 KRTDAPP60985 99 aa4.69□□□□□ -1.66
CAPN3-210ENST00000561817 Q6ZSN1 163 aa4.69□□□□□ -1.66
CAPN3-210ENST00000561817 ZNF664Q8N3J9 261 aa4.69□□□□□ -1.66
CAPN3-210ENST00000561817 SMIM2Q9BVW6 85 aa4.69□□□□□ -1.66
CAPN3-210ENST00000561817 KIR2DL5BA0A0G2JN68 375 aa4.68□□□□□ -1.66
CAPN3-210ENST00000561817 KIR2DL5BA0A0G2JPC4 375 aa4.68□□□□□ -1.66
CAPN3-210ENST00000561817 SYS1-DBNDD2H3BUS1 97 aa4.68□□□□□ -1.66
CAPN3-210ENST00000561817 HBDP02042 147 aa4.68□□□□□ -1.66
CAPN3-210ENST00000561817 IGLL1P15814 213 aa4.68□□□□□ -1.66
CAPN3-210ENST00000561817 NUTF2P61970 127 aaKnown RBP4.68□□□□□ -1.66
CAPN3-210ENST00000561817 CFAP126Q5VTH2 177 aa4.68□□□□□ -1.66
CAPN3-210ENST00000561817 KIR2DL5AQ8N109 375 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms