RNA–Protein interactions for RNA: ENST00000559257.5

USP3-211, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 2,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-211ENST00000559257 ENHOQ6UWT2 76 aa6.17□□□□□ -1.42
USP3-211ENST00000559257 F5P12259 2224 aa6.16□□□□□ -1.42
USP3-211ENST00000559257 IGHV3-30-3P0DP02 117 aa6.16□□□□□ -1.42
USP3-211ENST00000559257 A0A087WZ39 114 aa6.15□□□□□ -1.42
USP3-211ENST00000559257 IGHV3-48P01763 117 aa6.15□□□□□ -1.42
USP3-211ENST00000559257 TMEM30BQ3MIR4 351 aa6.15□□□□□ -1.42
USP3-211ENST00000559257 SPANXN1Q5VSR9 72 aa6.15□□□□□ -1.42
USP3-211ENST00000559257 ZNF833PQ6ZTB9 187 aa6.15□□□□□ -1.42
USP3-211ENST00000559257 RP1P56715 2156 aa6.15□□□□□ -1.42
USP3-211ENST00000559257 IGKV2-40A0A087WW87 121 aaPredicted RBP6.15□□□□□ -1.43
USP3-211ENST00000559257 IGKV3D-20A0A0C4DH25 116 aa6.15□□□□□ -1.43
USP3-211ENST00000559257 IGHV3-20A0A0C4DH32 117 aa6.15□□□□□ -1.43
USP3-211ENST00000559257 EPOPA6NHQ4 379 aa6.15□□□□□ -1.43
USP3-211ENST00000559257 IGKV2D-40P01614 121 aaPredicted RBP6.15□□□□□ -1.43
USP3-211ENST00000559257 CCL13Q99616 98 aa6.15□□□□□ -1.43
USP3-211ENST00000559257 ZFAND3Q9H8U3 227 aa6.15□□□□□ -1.43
USP3-211ENST00000559257 FUSP35637 526 aaKnown RBP eCLIP6.14□□□□□ -1.43
USP3-211ENST00000559257 Q6ZTC4 211 aa6.14□□□□□ -1.43
USP3-211ENST00000559257 LCA10Q71F78 164 aa6.14□□□□□ -1.43
USP3-211ENST00000559257 FAM218AQ96MZ4 157 aa6.14□□□□□ -1.43
USP3-211ENST00000559257 NDUFA12Q9UI09 145 aa6.14□□□□□ -1.43
USP3-211ENST00000559257 A0A087WWL8 130 aa6.14□□□□□ -1.43
USP3-211ENST00000559257 hDV103S1A0JD37 113 aa6.14□□□□□ -1.43
USP3-211ENST00000559257 IGKV1-16P04430 117 aa6.14□□□□□ -1.43
USP3-211ENST00000559257 Q6ZRP5 223 aa6.14□□□□□ -1.43
USP3-211ENST00000559257 OPRPNQ99935 248 aaPredicted RBP6.14□□□□□ -1.43
USP3-211ENST00000559257 PCNX2A6NKB5 2137 aa6.13□□□□□ -1.43
USP3-211ENST00000559257 IGHV1-18A0A0C4DH31 117 aa6.13□□□□□ -1.43
USP3-211ENST00000559257 CGB3P0DN86 165 aa6.13□□□□□ -1.43
USP3-211ENST00000559257 CGB7P0DN87 165 aa6.13□□□□□ -1.43
USP3-211ENST00000559257 SPINK2P20155 84 aa6.13□□□□□ -1.43
USP3-211ENST00000559257 C15orf32Q32M92 178 aa6.13□□□□□ -1.43
USP3-211ENST00000559257 RPL39LQ96EH5 51 aaKnown RBP6.13□□□□□ -1.43
USP3-211ENST00000559257 UBL5Q9BZL1 73 aa6.13□□□□□ -1.43
USP3-211ENST00000559257 KIAA0100Q14667 2235 aaKnown RBP6.13□□□□□ -1.43
USP3-211ENST00000559257 IGHV4OR15-8A0A075B7B6 117 aa6.13□□□□□ -1.43
USP3-211ENST00000559257 A0A087WW49 117 aa6.13□□□□□ -1.43
USP3-211ENST00000559257 RFPL3SP0C7P2 107 aa6.13□□□□□ -1.43
USP3-211ENST00000559257 PIK3CD-AS1Q5SR53 167 aa6.13□□□□□ -1.43
USP3-211ENST00000559257 SERTAD4-AS1Q5TG53 156 aa6.13□□□□□ -1.43
USP3-211ENST00000559257 IGFL3Q6UXB1 125 aa6.13□□□□□ -1.43
USP3-211ENST00000559257 GPHB5Q86YW7 130 aa6.13□□□□□ -1.43
USP3-211ENST00000559257 TNCP24821 2201 aa6.12□□□□□ -1.43
USP3-211ENST00000559257 F6UB75 175 aa6.12□□□□□ -1.43
USP3-211ENST00000559257 VCYO14598 125 aa6.12□□□□□ -1.43
USP3-211ENST00000559257 ATP11AUNQ6ZP68 121 aa6.12□□□□□ -1.43
USP3-211ENST00000559257 Q8N6K4 173 aa6.12□□□□□ -1.43
USP3-211ENST00000559257 WFDC9Q8NEX5 89 aa6.12□□□□□ -1.43
USP3-211ENST00000559257 Q8TAT8 98 aa6.12□□□□□ -1.43
USP3-211ENST00000559257 TMEM254Q8TBM7 123 aa6.12□□□□□ -1.43
USP3-211ENST00000559257 POLR2KP53803 58 aaKnown RBP6.11□□□□□ -1.43
USP3-211ENST00000559257 PI4KAP42356 2102 aa6.11□□□□□ -1.43
USP3-211ENST00000559257 CTSGP08311 255 aa6.11□□□□□ -1.43
USP3-211ENST00000559257 SYCNQ0VAF6 134 aa6.11□□□□□ -1.43
USP3-211ENST00000559257 C7orf65Q6ZTY9 151 aa6.11□□□□□ -1.43
USP3-211ENST00000559257 ZNF625Q96I27 306 aaPredicted RBP6.11□□□□□ -1.43
USP3-211ENST00000559257 IGHV3-64A0A075B6Q5 118 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 JMJD7-PLA2G4BH0Y9G9 81 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 BUB1B-PAK6H3BSN5 160 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 PRYO14603 147 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 MED14OSP0DP75 135 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 C9orf129Q5T035 196 aaKnown RBP6.1□□□□□ -1.43
USP3-211ENST00000559257 LINC00308Q8TCZ7 52 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 DIRC1Q969H9 104 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 Q9HAA7 133 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 A6NN06 94 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 A8MUN3 132 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 H0YGX0 51 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 FOLR3P41439 243 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 UBE2AP49459 152 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 RPL39P62891 51 aaKnown RBP6.1□□□□□ -1.43
USP3-211ENST00000559257 C17orf58Q2M2W7 97 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 LINC01560Q8TB33 94 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 BRCA2P51587 3418 aa6.1□□□□□ -1.43
USP3-211ENST00000559257 TRAV10A0A0B4J240 114 aa6.09□□□□□ -1.43
USP3-211ENST00000559257 TRAV22A0A0B4J277 110 aa6.09□□□□□ -1.43
USP3-211ENST00000559257 IGKV1-17P01599 117 aa6.09□□□□□ -1.43
USP3-211ENST00000559257 DEFB119Q8N690 84 aa6.09□□□□□ -1.43
USP3-211ENST00000559257 CXXC4Q9H2H0 198 aa6.09□□□□□ -1.43
USP3-211ENST00000559257 C11orf21Q9P2W6 132 aa6.09□□□□□ -1.43
USP3-211ENST00000559257 SEC16AO15027 2179 aa6.09□□□□□ -1.43
USP3-211ENST00000559257 NDUFA1O15239 70 aa6.09□□□□□ -1.44
USP3-211ENST00000559257 NDPQ00604 133 aa6.09□□□□□ -1.44
USP3-211ENST00000559257 LINC00574Q9H8X3 128 aa6.09□□□□□ -1.44
USP3-211ENST00000559257 ARHGAP32A7KAX9 2087 aa6.08□□□□□ -1.44
USP3-211ENST00000559257 A0A0J9YXV3 536 aa6.08□□□□□ -1.44
USP3-211ENST00000559257 CCL3P10147 92 aa6.08□□□□□ -1.44
USP3-211ENST00000559257 C10orf55Q5SWW7 151 aa6.08□□□□□ -1.44
USP3-211ENST00000559257 HCP5Q6MZN7 132 aa6.08□□□□□ -1.44
USP3-211ENST00000559257 IGKV3D-15A0A087WSY6 115 aa6.07□□□□□ -1.44
USP3-211ENST00000559257 TRBV6-5A0A0K0K1A5 114 aa6.07□□□□□ -1.44
USP3-211ENST00000559257 ZNF503-AS2A6NEH8 195 aa6.07□□□□□ -1.44
USP3-211ENST00000559257 CXCL6P80162 114 aa6.07□□□□□ -1.44
USP3-211ENST00000559257 LINC00269Q8N2A0 174 aa6.07□□□□□ -1.44
USP3-211ENST00000559257 ZNF580Q9UK33 172 aa6.07□□□□□ -1.44
USP3-211ENST00000559257 A0A096LPE4 126 aa6.07□□□□□ -1.44
USP3-211ENST00000559257 A0A1W2PPZ6 126 aa6.07□□□□□ -1.44
USP3-211ENST00000559257 I3L2K1 104 aa6.07□□□□□ -1.44
USP3-211ENST00000559257 B3GALT5-AS1P59052 145 aa6.07□□□□□ -1.44
USP3-211ENST00000559257 ZGRF1Q86YA3 2104 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms