RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ADORA2A-AS1P86434 159 aa10.73□□□□□ -0.69
SPG11-210ENST00000558319 DENND4AQ7Z401 1863 aa10.73□□□□□ -0.69
SPG11-210ENST00000558319 IGHV7-81A0A0B4J1V7 117 aa10.73□□□□□ -0.69
SPG11-210ENST00000558319 M0R2N4 97 aa10.73□□□□□ -0.69
SPG11-210ENST00000558319 SLPIP03973 132 aa10.73□□□□□ -0.69
SPG11-210ENST00000558319 A0A0J9YWU9 116 aa10.72□□□□□ -0.69
SPG11-210ENST00000558319 ENHOQ6UWT2 76 aa10.72□□□□□ -0.69
SPG11-210ENST00000558319 NOTCH3Q9UM47 2321 aa10.72□□□□□ -0.69
SPG11-210ENST00000558319 C16orf54Q6UWD8 224 aa10.72□□□□□ -0.69
SPG11-210ENST00000558319 C16orf74Q96GX8 76 aa10.72□□□□□ -0.69
SPG11-210ENST00000558319 I3L2K1 104 aa10.72□□□□□ -0.69
SPG11-210ENST00000558319 FGF23Q9GZV9 251 aaPredicted RBP10.72□□□□□ -0.69
SPG11-210ENST00000558319 FAM240AA0A1B0GVK7 77 aa10.71□□□□□ -0.69
SPG11-210ENST00000558319 C3orf22Q8N5N4 141 aa10.71□□□□□ -0.69
SPG11-210ENST00000558319 CTSGP08311 255 aa10.71□□□□□ -0.69
SPG11-210ENST00000558319 C11orf53Q8IXP5 236 aa10.71□□□□□ -0.69
SPG11-210ENST00000558319 NDUFC2-KCTD14E9PQ53 114 aa10.71□□□□□ -0.7
SPG11-210ENST00000558319 UQCRQO14949 82 aa10.71□□□□□ -0.7
SPG11-210ENST00000558319 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.7□□□□□ -0.7
SPG11-210ENST00000558319 PCNX1Q96RV3 2341 aa10.7□□□□□ -0.7
SPG11-210ENST00000558319 K7EIM0 57 aa10.7□□□□□ -0.7
SPG11-210ENST00000558319 HRCT1Q6UXD1 115 aa10.7□□□□□ -0.7
SPG11-210ENST00000558319 TP53TG3Q9ULZ0 132 aa10.7□□□□□ -0.7
SPG11-210ENST00000558319 IGHV1-58A0A0C4DH39 117 aa10.69□□□□□ -0.7
SPG11-210ENST00000558319 TEX22C9J3V5 150 aa10.69□□□□□ -0.7
SPG11-210ENST00000558319 SPANXB1Q9NS25 103 aaPredicted RBP10.69□□□□□ -0.7
SPG11-210ENST00000558319 SNURFQ9Y675 71 aa10.69□□□□□ -0.7
SPG11-210ENST00000558319 TRBV7-3A0A075B6L6 115 aa10.69□□□□□ -0.7
SPG11-210ENST00000558319 BPY2O14599 106 aa10.69□□□□□ -0.7
SPG11-210ENST00000558319 IGLV2-18A0A075B6J9 118 aa10.69□□□□□ -0.7
SPG11-210ENST00000558319 FAM167A-AS1Q96KT0 104 aa10.69□□□□□ -0.7
SPG11-210ENST00000558319 LENEPQ9Y5L5 61 aa10.69□□□□□ -0.7
SPG11-210ENST00000558319 NDUFA1O15239 70 aa10.69□□□□□ -0.7
SPG11-210ENST00000558319 IGLV3-1P01715 115 aa10.68□□□□□ -0.7
SPG11-210ENST00000558319 MDFICQ9P1T7 246 aa10.68□□□□□ -0.7
SPG11-210ENST00000558319 E7EUB6 86 aa10.68□□□□□ -0.7
SPG11-210ENST00000558319 C2orf70A6NJV1 201 aa10.67□□□□□ -0.7
SPG11-210ENST00000558319 C5orf56Q8N8D9 126 aa10.67□□□□□ -0.7
SPG11-210ENST00000558319 INAFM1C9JVW0 142 aa10.67□□□□□ -0.7
SPG11-210ENST00000558319 SPAG11BQ08648 103 aa10.67□□□□□ -0.7
SPG11-210ENST00000558319 SIRPDQ9H106 197 aa10.67□□□□□ -0.7
SPG11-210ENST00000558319 IGKV1-17P01599 117 aa10.67□□□□□ -0.7
SPG11-210ENST00000558319 UNQ9165/PRO28630Q6UXU0 137 aa10.67□□□□□ -0.7
SPG11-210ENST00000558319 TMEM263Q8WUH6 116 aaKnown RBP10.67□□□□□ -0.7
SPG11-210ENST00000558319 MIAQ16674 131 aa10.66□□□□□ -0.7
SPG11-210ENST00000558319 PIK3CD-AS1Q5SR53 167 aa10.66□□□□□ -0.7
SPG11-210ENST00000558319 H3BQ85 93 aa10.66□□□□□ -0.7
SPG11-210ENST00000558319 WFDC10BQ8IUB3 73 aa10.66□□□□□ -0.7
SPG11-210ENST00000558319 CASC2Q6XLA1 102 aa10.66□□□□□ -0.7
SPG11-210ENST00000558319 TANC2Q9HCD6 1990 aa10.66□□□□□ -0.7
SPG11-210ENST00000558319 OBSL1O75147 1896 aa10.66□□□□□ -0.7
SPG11-210ENST00000558319 PIP4P1Q86T03 277 aa10.66□□□□□ -0.7
SPG11-210ENST00000558319 LINC00482Q8N8I6 264 aa10.66□□□□□ -0.7
SPG11-210ENST00000558319 COX7BP24311 80 aa10.65□□□□□ -0.7
SPG11-210ENST00000558319 A0A0J9YXY3 114 aa10.65□□□□□ -0.7
SPG11-210ENST00000558319 CCDC179H3BU77 68 aa10.65□□□□□ -0.7
SPG11-210ENST00000558319 LINC01548A6NM66 108 aa10.64□□□□□ -0.71
SPG11-210ENST00000558319 Q8N9W7 124 aa10.64□□□□□ -0.71
SPG11-210ENST00000558319 PCNX2A6NKB5 2137 aa10.64□□□□□ -0.71
SPG11-210ENST00000558319 PRR4Q16378 134 aa10.64□□□□□ -0.71
SPG11-210ENST00000558319 HIGD2AQ9BW72 106 aa10.64□□□□□ -0.71
SPG11-210ENST00000558319 SMAD5-AS1Q9Y6J3 95 aa10.64□□□□□ -0.71
SPG11-210ENST00000558319 IGLV11-55A0A075B6I3 123 aa10.64□□□□□ -0.71
SPG11-210ENST00000558319 H3BUA1 57 aa10.64□□□□□ -0.71
SPG11-210ENST00000558319 GPHB5Q86YW7 130 aa10.64□□□□□ -0.71
SPG11-210ENST00000558319 DNAJC9-AS1A6NH13 148 aa10.64□□□□□ -0.71
SPG11-210ENST00000558319 USP17L23D6RBM5 183 aa10.63□□□□□ -0.71
SPG11-210ENST00000558319 CTRLP40313 264 aa10.63□□□□□ -0.71
SPG11-210ENST00000558319 SHANK1Q9Y566 2161 aa10.63□□□□□ -0.71
SPG11-210ENST00000558319 C19orf84I3L1E1 186 aa10.63□□□□□ -0.71
SPG11-210ENST00000558319 SIP14410 1827 aa10.63□□□□□ -0.71
SPG11-210ENST00000558319 GDF5OSQ5U4N7 250 aa10.62□□□□□ -0.71
SPG11-210ENST00000558319 NOTCH4Q99466 2003 aa10.62□□□□□ -0.71
SPG11-210ENST00000558319 DENND4CQ5VZ89 1909 aa10.62□□□□□ -0.71
SPG11-210ENST00000558319 DCANP1Q8TF63 244 aa10.61□□□□□ -0.71
SPG11-210ENST00000558319 NBASA2RRP1 2371 aa10.61□□□□□ -0.71
SPG11-210ENST00000558319 MED13Q9UHV7 2174 aa10.61□□□□□ -0.71
SPG11-210ENST00000558319 KLK5Q9Y337 293 aaPredicted RBP10.61□□□□□ -0.71
SPG11-210ENST00000558319 LINC00269Q8N2A0 174 aa10.61□□□□□ -0.71
SPG11-210ENST00000558319 Q8N7P7 452 aa10.61□□□□□ -0.71
SPG11-210ENST00000558319 LINC00322Q6ZN03 302 aaPredicted RBP10.6□□□□□ -0.71
SPG11-210ENST00000558319 C11orf45Q8TAV5 145 aa10.6□□□□□ -0.71
SPG11-210ENST00000558319 RETNQ9HD89 108 aa10.6□□□□□ -0.71
SPG11-210ENST00000558319 ANAPC1Q9H1A4 1944 aa10.6□□□□□ -0.71
SPG11-210ENST00000558319 MAPKAPK5-AS1Q8N8E1 139 aa10.6□□□□□ -0.71
SPG11-210ENST00000558319 KAAG1Q9UBP8 84 aa10.6□□□□□ -0.71
SPG11-210ENST00000558319 A6NED7 52 aa10.6□□□□□ -0.71
SPG11-210ENST00000558319 MRPS12O15235 138 aaKnown RBP10.6□□□□□ -0.71
SPG11-210ENST00000558319 C1orf195Q5TG92 126 aa10.6□□□□□ -0.71
SPG11-210ENST00000558319 PLXNA2O75051 1894 aa10.59□□□□□ -0.71
SPG11-210ENST00000558319 RBX1P62877 108 aa10.59□□□□□ -0.71
SPG11-210ENST00000558319 CLUHP3Q96NS8 147 aa10.59□□□□□ -0.71
SPG11-210ENST00000558319 A0A087WZ39 114 aa10.59□□□□□ -0.71
SPG11-210ENST00000558319 LINC00526Q96FQ7 95 aa10.59□□□□□ -0.71
SPG11-210ENST00000558319 A0A1W2PNU3 283 aaPredicted RBP10.59□□□□□ -0.71
SPG11-210ENST00000558319 FAM19A5Q7Z5A7 132 aaPredicted RBP10.59□□□□□ -0.71
SPG11-210ENST00000558319 TRIAP1O43715 76 aa10.59□□□□□ -0.71
SPG11-210ENST00000558319 TIMM17BO60830 172 aa10.59□□□□□ -0.71
SPG11-210ENST00000558319 ZNF106Q9H2Y7 1883 aaKnown RBP10.59□□□□□ -0.71
SPG11-210ENST00000558319 ZNF80P51504 273 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms