RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 EDN2P20800 178 aa6.13□□□□□ -1.43
SPG11-209ENST00000558253 SLURP1P55000 103 aa6.13□□□□□ -1.43
SPG11-209ENST00000558253 DEFB131AP59861 70 aa6.13□□□□□ -1.43
SPG11-209ENST00000558253 KRTAP10-9P60411 292 aa6.13□□□□□ -1.43
SPG11-209ENST00000558253 CKS1BP61024 79 aa6.13□□□□□ -1.43
SPG11-209ENST00000558253 ZNF56Q15929 161 aa6.13□□□□□ -1.43
SPG11-209ENST00000558253 C16orf95Q9H693 158 aa6.13□□□□□ -1.43
SPG11-209ENST00000558253 MRPL16Q9NX20 251 aaKnown RBP6.13□□□□□ -1.43
SPG11-209ENST00000558253 TP53TG1Q9Y2A0 90 aa6.13□□□□□ -1.43
SPG11-209ENST00000558253 PYGO1Q9Y3Y4 419 aa6.13□□□□□ -1.43
SPG11-209ENST00000558253 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.13□□□□□ -1.43
SPG11-209ENST00000558253 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.13□□□□□ -1.43
SPG11-209ENST00000558253 TRAV12-2A0A075B6T6 113 aa6.12□□□□□ -1.43
SPG11-209ENST00000558253 A0A087WWL8 130 aa6.12□□□□□ -1.43
SPG11-209ENST00000558253 C11orf86A6NJI1 115 aa6.12□□□□□ -1.43
SPG11-209ENST00000558253 INSP01308 110 aa6.12□□□□□ -1.43
SPG11-209ENST00000558253 GCSHP23434 173 aa6.12□□□□□ -1.43
SPG11-209ENST00000558253 RPL24P83731 157 aaKnown RBP6.12□□□□□ -1.43
SPG11-209ENST00000558253 CFAP161Q6P656 301 aa6.12□□□□□ -1.43
SPG11-209ENST00000558253 NFE4Q86UQ8 179 aa6.12□□□□□ -1.43
SPG11-209ENST00000558253 KLHL30-AS1Q8NEE0 82 aa6.12□□□□□ -1.43
SPG11-209ENST00000558253 FAM110AQ9BQ89 295 aa6.12□□□□□ -1.43
SPG11-209ENST00000558253 IGKV3-20P01619 116 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 TCTAP57738 103 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 SMAGPQ0VAQ4 97 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 FHL3Q13643 280 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 BEAN1Q3B7T3 259 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 FAM74A4Q5TZK3 123 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 LYRM7Q5U5X0 104 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 Q6ZSV7 163 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 TMEM61Q8N0U2 210 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 C20orf203Q8NBC4 194 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 DLX4Q92988 240 aaPredicted RBP6.11□□□□□ -1.43
SPG11-209ENST00000558253 DUX3Q96PT4 197 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 HIST1H4GQ99525 98 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 PRADC1Q9BSG0 188 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 MAP6D1Q9H9H5 199 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 TP73-AS1Q9UF72 201 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 TNFRSF18Q9Y5U5 241 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 AKAP6Q13023 2319 aa6.11□□□□□ -1.43
SPG11-209ENST00000558253 A0A1B0GWB2 263 aa6.1□□□□□ -1.43
SPG11-209ENST00000558253 DNAJC9-AS1A6NH13 148 aa6.1□□□□□ -1.43
SPG11-209ENST00000558253 KNCNA6PVL3 124 aa6.1□□□□□ -1.43
SPG11-209ENST00000558253 TSHBP01222 138 aa6.1□□□□□ -1.43
SPG11-209ENST00000558253 MAPKAPK5-AS1Q8N8E1 139 aa6.1□□□□□ -1.43
SPG11-209ENST00000558253 ZNF418Q8TF45 676 aaPredicted RBP6.1□□□□□ -1.43
SPG11-209ENST00000558253 TSSC4Q9Y5U2 329 aaPredicted RBP6.1□□□□□ -1.43
SPG11-209ENST00000558253 RELNP78509 3460 aa6.09□□□□□ -1.43
SPG11-209ENST00000558253 IGSF10Q6WRI0 2623 aa6.09□□□□□ -1.43
SPG11-209ENST00000558253 TEX48A0A1B0GUV7 120 aa6.09□□□□□ -1.43
SPG11-209ENST00000558253 ZNF815PA8K554 130 aa6.09□□□□□ -1.43
SPG11-209ENST00000558253 CCL24O00175 119 aa6.09□□□□□ -1.43
SPG11-209ENST00000558253 SPRY2O43597 315 aa6.09□□□□□ -1.43
SPG11-209ENST00000558253 KHDC1LQ5JSQ8 128 aa6.09□□□□□ -1.43
SPG11-209ENST00000558253 PLEKHB2Q96CS7 222 aa6.09□□□□□ -1.43
SPG11-209ENST00000558253 LINC01587Q99440 93 aa6.09□□□□□ -1.43
SPG11-209ENST00000558253 GTSF1LQ9H1H1 148 aa6.09□□□□□ -1.43
SPG11-209ENST00000558253 JPT2Q9H910 190 aa6.09□□□□□ -1.43
SPG11-209ENST00000558253 SPANXB1Q9NS25 103 aaPredicted RBP6.09□□□□□ -1.43
SPG11-209ENST00000558253 CFAP46Q8IYW2 2715 aa6.08□□□□□ -1.44
SPG11-209ENST00000558253 IGLV4-69A0A075B6H9 119 aa6.08□□□□□ -1.44
SPG11-209ENST00000558253 TRBV7-3A0A075B6L6 115 aa6.08□□□□□ -1.44
SPG11-209ENST00000558253 RS1O15537 224 aa6.08□□□□□ -1.44
SPG11-209ENST00000558253 NDUFA7O95182 113 aa6.08□□□□□ -1.44
SPG11-209ENST00000558253 IGHV3-53P01767 116 aa6.08□□□□□ -1.44
SPG11-209ENST00000558253 C12orf74Q32Q52 190 aa6.08□□□□□ -1.44
SPG11-209ENST00000558253 MORN3Q6PF18 240 aaPredicted RBP6.08□□□□□ -1.44
SPG11-209ENST00000558253 SCGB1D4Q6XE38 83 aa6.08□□□□□ -1.44
SPG11-209ENST00000558253 STHQ8IWL8 128 aa6.08□□□□□ -1.44
SPG11-209ENST00000558253 GEMIN7Q9H840 131 aaKnown RBP6.08□□□□□ -1.44
SPG11-209ENST00000558253 TRBV10-1A0A0K0K1A3 114 aa6.07□□□□□ -1.44
SPG11-209ENST00000558253 TMEM262E9PQX1 116 aa6.07□□□□□ -1.44
SPG11-209ENST00000558253 J3QKU1 62 aa6.07□□□□□ -1.44
SPG11-209ENST00000558253 LEPROTO15243 131 aa6.07□□□□□ -1.44
SPG11-209ENST00000558253 TSPAN13O95857 204 aa6.07□□□□□ -1.44
SPG11-209ENST00000558253 LGALS3P17931 250 aaKnown RBP6.07□□□□□ -1.44
SPG11-209ENST00000558253 FXYD2P54710 66 aa6.07□□□□□ -1.44
SPG11-209ENST00000558253 DEFB136Q30KP8 78 aa6.07□□□□□ -1.44
SPG11-209ENST00000558253 GAGE13Q4V321 117 aa6.07□□□□□ -1.44
SPG11-209ENST00000558253 CFAP126Q5VTH2 177 aa6.07□□□□□ -1.44
SPG11-209ENST00000558253 C11orf72Q8NBR9 251 aa6.07□□□□□ -1.44
SPG11-209ENST00000558253 PHLDA1Q8WV24 401 aaPredicted RBP6.07□□□□□ -1.44
SPG11-209ENST00000558253 TIMM21Q9BVV7 248 aa6.07□□□□□ -1.44
SPG11-209ENST00000558253 NHP2Q9NX24 153 aaKnown RBP6.07□□□□□ -1.44
SPG11-209ENST00000558253 SELENOKQ9Y6D0 94 aa6.07□□□□□ -1.44
SPG11-209ENST00000558253 UBR5O95071 2799 aaPredicted RBP6.06□□□□□ -1.44
SPG11-209ENST00000558253 ASH1LQ9NR48 2969 aaKnown RBP6.06□□□□□ -1.44
SPG11-209ENST00000558253 RBMY1BA6NDE4 496 aaKnown RBP6.06□□□□□ -1.44
SPG11-209ENST00000558253 RBMY1EA6NEQ0 496 aaKnown RBP6.06□□□□□ -1.44
SPG11-209ENST00000558253 IGLL5B9A064 214 aa6.06□□□□□ -1.44
SPG11-209ENST00000558253 H3BMG7 143 aa6.06□□□□□ -1.44
SPG11-209ENST00000558253 RBMY1DP0C7P1 496 aaKnown RBP6.06□□□□□ -1.44
SPG11-209ENST00000558253 RBMY1A1P0DJD3 496 aaKnown RBP6.06□□□□□ -1.44
SPG11-209ENST00000558253 RBMY1CP0DJD4 496 aa6.06□□□□□ -1.44
SPG11-209ENST00000558253 P0DMU3 169 aa6.06□□□□□ -1.44
SPG11-209ENST00000558253 FAM231AP0DMU4 169 aa6.06□□□□□ -1.44
SPG11-209ENST00000558253 FAM231CP0DMU5 169 aa6.06□□□□□ -1.44
SPG11-209ENST00000558253 SRSF9Q13242 221 aaKnown RBP eCLIP6.06□□□□□ -1.44
SPG11-209ENST00000558253 RBMY1FQ15415 496 aaKnown RBP6.06□□□□□ -1.44
SPG11-209ENST00000558253 TMEM170BQ5T4T1 132 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms