RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 DNAJC30Q96LL9 226 aa6.82□□□□□ -1.32
TMEM260-213ENST00000556929 YPEL4Q96NS1 127 aa6.82□□□□□ -1.32
TMEM260-213ENST00000556929 DNAH7Q8WXX0 4024 aa6.81□□□□□ -1.32
TMEM260-213ENST00000556929 M0QY20 66 aa6.81□□□□□ -1.32
TMEM260-213ENST00000556929 PPP1R17O96001 155 aa6.81□□□□□ -1.32
TMEM260-213ENST00000556929 APCSP02743 223 aa6.81□□□□□ -1.32
TMEM260-213ENST00000556929 PPBPP02775 128 aa6.81□□□□□ -1.32
TMEM260-213ENST00000556929 GYPEP15421 78 aa6.81□□□□□ -1.32
TMEM260-213ENST00000556929 TCTAP57738 103 aa6.81□□□□□ -1.32
TMEM260-213ENST00000556929 RPL36AP83881 106 aaKnown RBP6.81□□□□□ -1.32
TMEM260-213ENST00000556929 MRPL23Q16540 153 aaKnown RBP6.81□□□□□ -1.32
TMEM260-213ENST00000556929 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.81□□□□□ -1.32
TMEM260-213ENST00000556929 RPL36ALQ969Q0 106 aaKnown RBP6.81□□□□□ -1.32
TMEM260-213ENST00000556929 VSIG2Q96IQ7 327 aa6.81□□□□□ -1.32
TMEM260-213ENST00000556929 NIT2Q9NQR4 276 aa6.81□□□□□ -1.32
TMEM260-213ENST00000556929 TRAPPC1Q9Y5R8 145 aa6.81□□□□□ -1.32
TMEM260-213ENST00000556929 TNFRSF18Q9Y5U5 241 aa6.81□□□□□ -1.32
TMEM260-213ENST00000556929 ICOSQ9Y6W8 199 aa6.81□□□□□ -1.32
TMEM260-213ENST00000556929 TRAV26-2A0A0B4J265 109 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 GAGE12JA6NER3 117 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 C3orf84H3BNL1 204 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 NUDT3O95989 172 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 SRIP30626 198 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 FABP9Q0Z7S8 132 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 GAGE1Q13065 139 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 GAGE4Q13068 117 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 GAGE5Q13069 117 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 GAGE13Q4V321 117 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 OR10J3Q5JRS4 329 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 ZFAND6Q6FIF0 208 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 SH2D6Q7Z4S9 175 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 ORMDL3Q8N138 153 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 NEXN-AS1Q8NBZ9 246 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 ZNRF2Q8NHG8 242 aa6.8□□□□□ -1.32
TMEM260-213ENST00000556929 MRPL18Q9H0U6 180 aaKnown RBP6.8□□□□□ -1.32
TMEM260-213ENST00000556929 TRBV7-3A0A075B6L6 115 aa6.79□□□□□ -1.32
TMEM260-213ENST00000556929 LOC100131303A0A0U1RQF7 123 aa6.79□□□□□ -1.32
TMEM260-213ENST00000556929 COLCA2A8K830 154 aa6.79□□□□□ -1.32
TMEM260-213ENST00000556929 D6R8Y8 96 aa6.79□□□□□ -1.32
TMEM260-213ENST00000556929 SMKR1H3BMG3 65 aa6.79□□□□□ -1.32
TMEM260-213ENST00000556929 P0DMU3 169 aa6.79□□□□□ -1.32
TMEM260-213ENST00000556929 FAM231AP0DMU4 169 aa6.79□□□□□ -1.32
TMEM260-213ENST00000556929 FAM231CP0DMU5 169 aa6.79□□□□□ -1.32
TMEM260-213ENST00000556929 RPS10P46783 165 aaKnown RBP6.79□□□□□ -1.32
TMEM260-213ENST00000556929 DYNC2H1Q8NCM8 4307 aaKnown RBP6.78□□□□□ -1.32
TMEM260-213ENST00000556929 A0A096LPF7 62 aa6.78□□□□□ -1.32
TMEM260-213ENST00000556929 TRBV6-5A0A0K0K1A5 114 aa6.78□□□□□ -1.32
TMEM260-213ENST00000556929 PHOX2AO14813 284 aa6.78□□□□□ -1.32
TMEM260-213ENST00000556929 NCR2O95944 276 aa6.78□□□□□ -1.32
TMEM260-213ENST00000556929 GHRHP01286 108 aa6.78□□□□□ -1.32
TMEM260-213ENST00000556929 NEGR1Q7Z3B1 354 aa6.78□□□□□ -1.32
TMEM260-213ENST00000556929 RPL39LQ96EH5 51 aaKnown RBP6.78□□□□□ -1.32
TMEM260-213ENST00000556929 PRELID3AQ96N28 172 aa6.78□□□□□ -1.32
TMEM260-213ENST00000556929 ST20Q9HBF5 79 aa6.78□□□□□ -1.32
TMEM260-213ENST00000556929 LAMTOR2Q9Y2Q5 125 aa6.78□□□□□ -1.32
TMEM260-213ENST00000556929 TNFRSF6BO95407 300 aa6.77□□□□□ -1.33
TMEM260-213ENST00000556929 RAB5AP20339 215 aa6.77□□□□□ -1.33
TMEM260-213ENST00000556929 UBE2D3P61077 147 aa6.77□□□□□ -1.33
TMEM260-213ENST00000556929 UBE2D2P62837 147 aa6.77□□□□□ -1.33
TMEM260-213ENST00000556929 KIAA1644Q3SXP7 199 aa6.77□□□□□ -1.33
TMEM260-213ENST00000556929 DAZ4Q86SG3 579 aaKnown RBP6.77□□□□□ -1.33
TMEM260-213ENST00000556929 ATP6V0E2Q8NHE4 81 aa6.77□□□□□ -1.33
TMEM260-213ENST00000556929 DAZ3Q9NR90 486 aaKnown RBP6.77□□□□□ -1.33
TMEM260-213ENST00000556929 APLNQ9ULZ1 77 aa6.77□□□□□ -1.33
TMEM260-213ENST00000556929 TGP01266 2768 aa6.76□□□□□ -1.33
TMEM260-213ENST00000556929 SDHAF1A6NFY7 115 aa6.76□□□□□ -1.33
TMEM260-213ENST00000556929 GAS8-AS1O95177 125 aa6.76□□□□□ -1.33
TMEM260-213ENST00000556929 LINC00694P0DN24 101 aa6.76□□□□□ -1.33
TMEM260-213ENST00000556929 SUMO2P61956 95 aaKnown RBP6.76□□□□□ -1.33
TMEM260-213ENST00000556929 TMEM97Q5BJF2 176 aa6.76□□□□□ -1.33
TMEM260-213ENST00000556929 CASC10Q5T4H9 136 aa6.76□□□□□ -1.33
TMEM260-213ENST00000556929 NRACQ8N912 160 aa6.76□□□□□ -1.33
TMEM260-213ENST00000556929 C20orf78Q9BR46 151 aa6.76□□□□□ -1.33
TMEM260-213ENST00000556929 MAP1LC3AQ9H492 121 aa6.76□□□□□ -1.33
TMEM260-213ENST00000556929 Q9UF83 564 aa6.76□□□□□ -1.33
TMEM260-213ENST00000556929 STAB2Q8WWQ8 2551 aa6.75□□□□□ -1.33
TMEM260-213ENST00000556929 I3L3M4 83 aa6.75□□□□□ -1.33
TMEM260-213ENST00000556929 VCYO14598 125 aa6.75□□□□□ -1.33
TMEM260-213ENST00000556929 NPYP01303 97 aa6.75□□□□□ -1.33
TMEM260-213ENST00000556929 PMCHP20382 165 aa6.75□□□□□ -1.33
TMEM260-213ENST00000556929 ALKBH7Q9BT30 221 aaPredicted RBP6.75□□□□□ -1.33
TMEM260-213ENST00000556929 GTSF1LQ9H1H1 148 aa6.75□□□□□ -1.33
TMEM260-213ENST00000556929 CSMD3Q7Z407 3707 aa6.74□□□□□ -1.33
TMEM260-213ENST00000556929 PLECQ15149 4684 aaKnown RBP6.74□□□□□ -1.33
TMEM260-213ENST00000556929 IGHV3-38A0A0C4DH36 116 aa6.74□□□□□ -1.33
TMEM260-213ENST00000556929 PRSS47A8MTI9 375 aa6.74□□□□□ -1.33
TMEM260-213ENST00000556929 TRGC2P03986 189 aa6.74□□□□□ -1.33
TMEM260-213ENST00000556929 POLR2KP53803 58 aaKnown RBP6.74□□□□□ -1.33
TMEM260-213ENST00000556929 CCL18P55774 89 aa6.74□□□□□ -1.33
TMEM260-213ENST00000556929 RPL32P62910 135 aaKnown RBP6.74□□□□□ -1.33
TMEM260-213ENST00000556929 COTL1Q14019 142 aa6.74□□□□□ -1.33
TMEM260-213ENST00000556929 LYPD5Q6UWN5 251 aa6.74□□□□□ -1.33
TMEM260-213ENST00000556929 KIR2DL4Q99706 377 aa6.74□□□□□ -1.33
TMEM260-213ENST00000556929 TMEM70Q9BUB7 260 aa6.74□□□□□ -1.33
TMEM260-213ENST00000556929 STARD9Q9P2P6 4700 aa6.74□□□□□ -1.33
TMEM260-213ENST00000556929 TRBV27A0A0K0K1C4 114 aa6.73□□□□□ -1.33
TMEM260-213ENST00000556929 LOC389332A0A1B0GUA5 103 aa6.73□□□□□ -1.33
TMEM260-213ENST00000556929 TCAPO15273 167 aa6.73□□□□□ -1.33
TMEM260-213ENST00000556929 TIRAPP58753 221 aa6.73□□□□□ -1.33
TMEM260-213ENST00000556929 ESRGQ1W209 222 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms