RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 TRBV7-1A0A0A6YYK4 115 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 IGHV3-35A0A0C4DH35 117 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 C7orf71A4D174 169 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 TMEM189A5PLL7 270 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 RBMY1BA6NDE4 496 aaKnown RBP2.9□□□□□ -1.95
ATXN3-240ENST00000556339 RBMY1EA6NEQ0 496 aaKnown RBP2.9□□□□□ -1.95
ATXN3-240ENST00000556339 LINC01549A6NIU2 74 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 K7EIM0 57 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 K7EMI3 77 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 MRPS12O15235 138 aaKnown RBP2.9□□□□□ -1.95
ATXN3-240ENST00000556339 GNG7O60262 68 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 TNFRSF6BO95407 300 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 BRI3O95415 125 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 CLEC3BP05452 202 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 CD7P09564 240 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 RBMY1DP0C7P1 496 aaKnown RBP2.9□□□□□ -1.95
ATXN3-240ENST00000556339 GPR183P32249 361 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 GNG5P63218 68 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 C10orf55Q5SWW7 151 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 BVES-AS1Q5T3Y7 98 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 DGAT2L7PQ6IED9 249 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 LINC00322Q6ZN03 302 aaPredicted RBP2.9□□□□□ -1.95
ATXN3-240ENST00000556339 GOLT1AQ6ZVE7 132 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 GTF2H5Q6ZYL4 71 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 PRNTQ86SH4 94 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 GPHB5Q86YW7 130 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 OR4C5Q8NGB2 326 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 RNF183Q96D59 192 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 ZNF414Q96IQ9 312 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 SLC50A1Q9BRV3 221 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 NXT2Q9NPJ8 142 aaKnown RBP2.9□□□□□ -1.95
ATXN3-240ENST00000556339 UFC1Q9Y3C8 167 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 LENEPQ9Y5L5 61 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 SACSQ9NZJ4 4579 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 HUWE1Q7Z6Z7 4374 aaKnown RBP2.9□□□□□ -1.95
ATXN3-240ENST00000556339 RYR2Q92736 4967 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 IGHV3-21A0A0B4J1V1 117 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 A0A1B0GVY2 172 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 FABP5P3A8MUU1 101 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 H3BRM9 83 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 K7ERU9 68 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 LGALS9O00182 355 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 TAX1BP3O14907 124 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 CCL25O15444 150 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 ATP5LO75964 103 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 LY6G6CO95867 125 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 HBDP02042 147 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 IL4P05112 153 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 HINT1P49773 126 aaPredicted RBP2.89□□□□□ -1.95
ATXN3-240ENST00000556339 APOC4P55056 127 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 HSD52Q0P140 79 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 VAMP3Q15836 100 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 TMEM97Q5BJF2 176 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 OR5A1Q8NGJ0 315 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 ZC2HC1AQ96GY0 325 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 PRELID3AQ96N28 172 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 EDA2RQ9HAV5 297 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 C21orf62Q9NYP8 219 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 HIGD1BQ9P298 99 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 KLK5Q9Y337 293 aaPredicted RBP2.89□□□□□ -1.95
ATXN3-240ENST00000556339 AGRNO00468 2067 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 DNAH7Q8WXX0 4024 aa2.89□□□□□ -1.95
ATXN3-240ENST00000556339 IGKV3-7A0A075B6H7 116 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 IGHV4-4A0A075B6R2 117 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 TRAV25A0A0B4J276 109 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 TRBV7-9A0A0J9YWB2 115 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 OR2T8A6NH00 312 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 ZNF207O43670 478 aaKnown RBP2.88□□□□□ -1.95
ATXN3-240ENST00000556339 PPP1R17O96001 155 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 ARMS2P0C7Q2 107 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 IGLC6P0CF74 106 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 SMIM17P0DL12 118 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 RPL35AP18077 110 aaKnown RBP2.88□□□□□ -1.95
ATXN3-240ENST00000556339 FCER1GP30273 86 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 TFPI2P48307 235 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 CRIP1P50238 77 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 CMC4P56277 68 aaPredicted RBP2.88□□□□□ -1.95
ATXN3-240ENST00000556339 CACNG7P62955 275 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 TAL2Q16559 108 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 MPV17L2Q567V2 206 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 LYZL1Q6UWQ5 148 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 SMIM15Q7Z3B0 74 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 TMEM61Q8N0U2 210 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 EXOC3-AS1Q8N2X6 119 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 FER1L6-AS1Q8NA97 138 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 IFI27L1Q96BM0 104 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 AP1S3Q96PC3 154 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 WFDC10AQ9H1F0 79 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 MAP1LC3AQ9H492 121 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 RPH3ALQ9UNE2 315 aa2.88□□□□□ -1.95
ATXN3-240ENST00000556339 DNAH1Q9P2D7 4330 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 HYDINQ4G0P3 5121 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 IGHV3OR16-8A0A075B7F1 116 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 TRAV8-1A0A0A6YYK1 113 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 A0A0J9YWU9 116 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 GAGE10A6NGK3 116 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 SH2D1AO60880 128 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 IGHV3-48P01763 117 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 FGF6P10767 208 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms