RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 ZFP82Q8N141 532 aa5.91□□□□□ -1.46
SCFD1-215ENST00000555259 C20orf203Q8NBC4 194 aa5.91□□□□□ -1.46
SCFD1-215ENST00000555259 SDHCQ99643 169 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-215ENST00000555259 DERL1Q9BUN8 251 aa5.91□□□□□ -1.46
SCFD1-215ENST00000555259 ARL2-SNX15V9GYD0 113 aa5.91□□□□□ -1.46
SCFD1-215ENST00000555259 TRAV34A0A0B4J273 112 aa5.9□□□□□ -1.46
SCFD1-215ENST00000555259 TRBV6-1A0A0K0K1D8 114 aa5.9□□□□□ -1.46
SCFD1-215ENST00000555259 H0YIZ8 118 aa5.9□□□□□ -1.46
SCFD1-215ENST00000555259 CRIP1P50238 77 aa5.9□□□□□ -1.46
SCFD1-215ENST00000555259 RAB2AP61019 212 aa5.9□□□□□ -1.46
SCFD1-215ENST00000555259 ZNF56Q15929 161 aa5.9□□□□□ -1.46
SCFD1-215ENST00000555259 LRRC37A5PQ49AS3 106 aa5.9□□□□□ -1.46
SCFD1-215ENST00000555259 SCGB1C1Q8TD33 95 aa5.9□□□□□ -1.46
SCFD1-215ENST00000555259 GFRA4Q9GZZ7 299 aa5.9□□□□□ -1.46
SCFD1-215ENST00000555259 RBM38Q9H0Z9 239 aaKnown RBP5.9□□□□□ -1.46
SCFD1-215ENST00000555259 CACNG7P62955 275 aa5.89□□□□□ -1.47
SCFD1-215ENST00000555259 PRR4Q16378 134 aa5.89□□□□□ -1.47
SCFD1-215ENST00000555259 IQCJQ1A5X6 159 aa5.89□□□□□ -1.47
SCFD1-215ENST00000555259 HIGD2BQ4VC39 106 aa5.89□□□□□ -1.47
SCFD1-215ENST00000555259 CFAP161Q6P656 301 aa5.89□□□□□ -1.47
SCFD1-215ENST00000555259 PRR26Q8N8Z3 221 aa5.89□□□□□ -1.47
SCFD1-215ENST00000555259 SUN5Q8TC36 379 aa5.89□□□□□ -1.47
SCFD1-215ENST00000555259 NUDT15Q9NV35 164 aa5.89□□□□□ -1.47
SCFD1-215ENST00000555259 LINC00474Q9P2X8 69 aa5.89□□□□□ -1.47
SCFD1-215ENST00000555259 IGLV4-60A0A075B6I1 120 aa5.89□□□□□ -1.47
SCFD1-215ENST00000555259 PLA2G10O15496 165 aa5.89□□□□□ -1.47
SCFD1-215ENST00000555259 IL7P13232 177 aa5.89□□□□□ -1.47
SCFD1-215ENST00000555259 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
SCFD1-215ENST00000555259 TMSB15BA0A087X1C1 80 aa5.88□□□□□ -1.47
SCFD1-215ENST00000555259 IGHV1-24A0A0C4DH33 117 aa5.88□□□□□ -1.47
SCFD1-215ENST00000555259 A0A1B0GUV1 79 aa5.88□□□□□ -1.47
SCFD1-215ENST00000555259 SH2D1AO60880 128 aa5.88□□□□□ -1.47
SCFD1-215ENST00000555259 STAG3L2P0CL84 134 aa5.88□□□□□ -1.47
SCFD1-215ENST00000555259 STAG3L3P0CL85 134 aa5.88□□□□□ -1.47
SCFD1-215ENST00000555259 GCHFRP30047 84 aa5.88□□□□□ -1.47
SCFD1-215ENST00000555259 SMIM3Q9BZL3 60 aa5.88□□□□□ -1.47
SCFD1-215ENST00000555259 GAGE12HA6NDE8 117 aa5.87□□□□□ -1.47
SCFD1-215ENST00000555259 LYRM1O43325 122 aa5.87□□□□□ -1.47
SCFD1-215ENST00000555259 SIX6O95475 246 aa5.87□□□□□ -1.47
SCFD1-215ENST00000555259 CDC34P49427 236 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-215ENST00000555259 Q86TA4 180 aa5.87□□□□□ -1.47
SCFD1-215ENST00000555259 HSPB11Q9Y547 144 aa5.87□□□□□ -1.47
SCFD1-215ENST00000555259 GVQW2A0A096LPI5 108 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-215ENST00000555259 FAM162BQ5T6X4 162 aa5.86□□□□□ -1.47
SCFD1-215ENST00000555259 INO80EQ8NBZ0 244 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-215ENST00000555259 AQP10Q96PS8 301 aa5.86□□□□□ -1.47
SCFD1-215ENST00000555259 F5H697 171 aa5.85□□□□□ -1.47
SCFD1-215ENST00000555259 H2AFB2P0C5Z0 115 aa5.85□□□□□ -1.47
SCFD1-215ENST00000555259 SULT1A2P50226 295 aa5.85□□□□□ -1.47
SCFD1-215ENST00000555259 COX8CQ7Z4L0 72 aa5.85□□□□□ -1.47
SCFD1-215ENST00000555259 OR10AG1Q8NH19 301 aa5.85□□□□□ -1.47
SCFD1-215ENST00000555259 RAB24Q969Q5 203 aa5.85□□□□□ -1.47
SCFD1-215ENST00000555259 WFDC1Q9HC57 220 aa5.85□□□□□ -1.47
SCFD1-215ENST00000555259 TMEM167BQ9NRX6 74 aa5.85□□□□□ -1.47
SCFD1-215ENST00000555259 TMEM243Q9BU79 118 aa5.84□□□□□ -1.47
SCFD1-215ENST00000555259 PKIGQ9Y2B9 76 aa5.84□□□□□ -1.47
SCFD1-215ENST00000555259 A0A1W2PRE2 83 aa5.84□□□□□ -1.48
SCFD1-215ENST00000555259 PEX7O00628 323 aa5.84□□□□□ -1.48
SCFD1-215ENST00000555259 ZNF674Q2M3X9 581 aa5.84□□□□□ -1.48
SCFD1-215ENST00000555259 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.48
SCFD1-215ENST00000555259 ZFP30Q9Y2G7 519 aa5.84□□□□□ -1.48
SCFD1-215ENST00000555259 CXorf1O96002 111 aa5.83□□□□□ -1.48
SCFD1-215ENST00000555259 MT-ND6P03923 174 aa5.83□□□□□ -1.48
SCFD1-215ENST00000555259 RPL12P30050 165 aaKnown RBP5.83□□□□□ -1.48
SCFD1-215ENST00000555259 KRTAP19-1Q8IUB9 90 aa5.83□□□□□ -1.48
SCFD1-215ENST00000555259 PPP1R1CQ8WVI7 109 aa5.83□□□□□ -1.48
SCFD1-215ENST00000555259 ZNF471Q9BX82 626 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-215ENST00000555259 IGKV3OR2-268A0A0C4DH90 116 aa5.82□□□□□ -1.48
SCFD1-215ENST00000555259 CYCSP99999 105 aaKnown RBP5.82□□□□□ -1.48
SCFD1-215ENST00000555259 FER1L6-AS1Q8NA97 138 aa5.82□□□□□ -1.48
SCFD1-215ENST00000555259 CHCHD10Q8WYQ3 142 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-215ENST00000555259 DIRC1Q969H9 104 aa5.82□□□□□ -1.48
SCFD1-215ENST00000555259 MUC17Q685J3 4493 aa5.82□□□□□ -1.48
SCFD1-215ENST00000555259 IGLV1-50A0A075B6I6 118 aa5.81□□□□□ -1.48
SCFD1-215ENST00000555259 MUC21A0A140T8X8 626 aa5.81□□□□□ -1.48
SCFD1-215ENST00000555259 CCDC160A6NGH7 325 aa5.81□□□□□ -1.48
SCFD1-215ENST00000555259 A6NHS1 94 aa5.81□□□□□ -1.48
SCFD1-215ENST00000555259 PTTG1IPP53801 180 aa5.81□□□□□ -1.48
SCFD1-215ENST00000555259 DEFA3P59666 94 aa5.81□□□□□ -1.48
SCFD1-215ENST00000555259 C1orf137Q5JT78 98 aa5.81□□□□□ -1.48
SCFD1-215ENST00000555259 SPANXN1Q5VSR9 72 aa5.81□□□□□ -1.48
SCFD1-215ENST00000555259 HIST1H2BAQ96A08 127 aa5.81□□□□□ -1.48
SCFD1-215ENST00000555259 LINC00526Q96FQ7 95 aa5.81□□□□□ -1.48
SCFD1-215ENST00000555259 CARD19Q96LW7 228 aa5.81□□□□□ -1.48
SCFD1-215ENST00000555259 A0A1W2PNN7 141 aa5.8□□□□□ -1.48
SCFD1-215ENST00000555259 M0QY20 66 aa5.8□□□□□ -1.48
SCFD1-215ENST00000555259 UBE2L6O14933 153 aa5.8□□□□□ -1.48
SCFD1-215ENST00000555259 MPC2O95563 127 aa5.8□□□□□ -1.48
SCFD1-215ENST00000555259 SMIM17P0DL12 118 aa5.8□□□□□ -1.48
SCFD1-215ENST00000555259 H2BFSP57053 126 aa5.8□□□□□ -1.48
SCFD1-215ENST00000555259 SSBP4Q9BWG4 385 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-215ENST00000555259 FAM240BA0A1B0GVZ2 78 aa5.8□□□□□ -1.48
SCFD1-215ENST00000555259 H0Y9J4 135 aa5.8□□□□□ -1.48
SCFD1-215ENST00000555259 SNAI2O43623 268 aa5.8□□□□□ -1.48
SCFD1-215ENST00000555259 PET100P0DJ07 73 aa5.8□□□□□ -1.48
SCFD1-215ENST00000555259 AMTP48728 403 aa5.8□□□□□ -1.48
SCFD1-215ENST00000555259 NKX2-5P52952 324 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-215ENST00000555259 UBE2G2P60604 165 aa5.8□□□□□ -1.48
SCFD1-215ENST00000555259 SSTP61278 116 aa5.8□□□□□ -1.48
SCFD1-215ENST00000555259 FMC1Q96HJ9 113 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms