RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 NUPR1O60356 82 aa7.58□□□□□ -1.2
TDP1-211ENST00000555178 NDUFA6P56556 154 aa7.58□□□□□ -1.2
TDP1-211ENST00000555178 FHL2Q14192 279 aa7.58□□□□□ -1.2
TDP1-211ENST00000555178 URB1-AS1Q96HZ7 61 aa7.58□□□□□ -1.2
TDP1-211ENST00000555178 LOC100131303A0A0U1RQF7 123 aa7.58□□□□□ -1.2
TDP1-211ENST00000555178 RHODO00212 210 aa7.58□□□□□ -1.2
TDP1-211ENST00000555178 HTN3P15516 51 aa7.58□□□□□ -1.2
TDP1-211ENST00000555178 ZFP2Q6ZN57 461 aa7.58□□□□□ -1.2
TDP1-211ENST00000555178 SLC25A29Q8N8R3 303 aa7.58□□□□□ -1.2
TDP1-211ENST00000555178 LYSTQ99698 3801 aa7.57□□□□□ -1.2
TDP1-211ENST00000555178 NHLRC4P0CG21 123 aaPredicted RBP7.57□□□□□ -1.2
TDP1-211ENST00000555178 STARD9Q9P2P6 4700 aa7.57□□□□□ -1.2
TDP1-211ENST00000555178 TRGV4A0A0C4DH28 118 aa7.56□□□□□ -1.2
TDP1-211ENST00000555178 PPBPP02775 128 aa7.56□□□□□ -1.2
TDP1-211ENST00000555178 IFI27P40305 119 aaPredicted RBP7.56□□□□□ -1.2
TDP1-211ENST00000555178 PDZD11Q5EBL8 140 aa7.56□□□□□ -1.2
TDP1-211ENST00000555178 OR10J3Q5JRS4 329 aa7.56□□□□□ -1.2
TDP1-211ENST00000555178 C11orf45Q8TAV5 145 aa7.56□□□□□ -1.2
TDP1-211ENST00000555178 C18orf15Q96N68 181 aa7.56□□□□□ -1.2
TDP1-211ENST00000555178 SERF1AO75920 110 aa7.56□□□□□ -1.2
TDP1-211ENST00000555178 BAGE3Q86Y29 109 aa7.56□□□□□ -1.2
TDP1-211ENST00000555178 NEXN-AS1Q8NBZ9 246 aa7.56□□□□□ -1.2
TDP1-211ENST00000555178 K7EQD1 137 aa7.55□□□□□ -1.2
TDP1-211ENST00000555178 SNRPEP62304 92 aaKnown RBP7.55□□□□□ -1.2
TDP1-211ENST00000555178 A0A0J9YY99 117 aa7.55□□□□□ -1.2
TDP1-211ENST00000555178 SUMO2P61956 95 aaKnown RBP7.55□□□□□ -1.2
TDP1-211ENST00000555178 Q0VG73 95 aa7.55□□□□□ -1.2
TDP1-211ENST00000555178 PMCHL1Q16048 86 aa7.55□□□□□ -1.2
TDP1-211ENST00000555178 RNASEKQ6P5S7 137 aaKnown RBP7.55□□□□□ -1.2
TDP1-211ENST00000555178 DYNC2H1Q8NCM8 4307 aaKnown RBP7.55□□□□□ -1.2
TDP1-211ENST00000555178 IGHV3-38A0A0C4DH36 116 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 ATP5G1P05496 136 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 NIT1Q86X76 327 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 MAP1LC3AQ9H492 121 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 NIT2Q9NQR4 276 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 IGLV2-18A0A075B6J9 118 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 GAGE12JA6NER3 117 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 SDHAF1A6NFY7 115 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 F5H768 121 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 TCAPO15273 167 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 S100A6P06703 90 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 GAGE1Q13065 139 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 GAGE4Q13068 117 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 GAGE5Q13069 117 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 GAGE13Q4V321 117 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 PHLDA1Q8WV24 401 aaPredicted RBP7.54□□□□□ -1.2
TDP1-211ENST00000555178 TMEM70Q9BUB7 260 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 HHLA3Q9XRX5 114 aa7.54□□□□□ -1.2
TDP1-211ENST00000555178 CRYBA4P53673 196 aa7.53□□□□□ -1.2
TDP1-211ENST00000555178 ZNRF2Q8NHG8 242 aa7.53□□□□□ -1.2
TDP1-211ENST00000555178 PRSS3P2Q8NHM4 247 aa7.53□□□□□ -1.2
TDP1-211ENST00000555178 VSIG2Q96IQ7 327 aa7.53□□□□□ -1.2
TDP1-211ENST00000555178 SMIM2Q9BVW6 85 aa7.53□□□□□ -1.2
TDP1-211ENST00000555178 ST20Q9HBF5 79 aa7.53□□□□□ -1.2
TDP1-211ENST00000555178 LAMTOR2Q9Y2Q5 125 aa7.53□□□□□ -1.2
TDP1-211ENST00000555178 TRAV26-1A0A087WT03 109 aa7.52□□□□□ -1.2
TDP1-211ENST00000555178 H7C1H1 209 aa7.52□□□□□ -1.2
TDP1-211ENST00000555178 FAM19A2Q8N3H0 131 aa7.52□□□□□ -1.2
TDP1-211ENST00000555178 A0A096LPF7 62 aa7.52□□□□□ -1.21
TDP1-211ENST00000555178 TRBV6-5A0A0K0K1A5 114 aa7.52□□□□□ -1.21
TDP1-211ENST00000555178 TEX48A0A1B0GUV7 120 aa7.52□□□□□ -1.21
TDP1-211ENST00000555178 TRBV6-4A0A1B0GX49 114 aa7.52□□□□□ -1.21
TDP1-211ENST00000555178 C5orf52A6NGY3 159 aa7.52□□□□□ -1.21
TDP1-211ENST00000555178 IFITM10A6NMD0 228 aa7.52□□□□□ -1.21
TDP1-211ENST00000555178 POLR2KP53803 58 aaKnown RBP7.52□□□□□ -1.21
TDP1-211ENST00000555178 COA6Q5JTJ3 125 aaKnown RBP7.52□□□□□ -1.21
TDP1-211ENST00000555178 LINC00614P0C842 121 aa7.51□□□□□ -1.21
TDP1-211ENST00000555178 RHOHQ15669 191 aa7.51□□□□□ -1.21
TDP1-211ENST00000555178 C20orf78Q9BR46 151 aa7.51□□□□□ -1.21
TDP1-211ENST00000555178 PRO0255Q9UI72 69 aa7.51□□□□□ -1.21
TDP1-211ENST00000555178 TNFRSF18Q9Y5U5 241 aa7.51□□□□□ -1.21
TDP1-211ENST00000555178 PLECQ15149 4684 aaKnown RBP7.51□□□□□ -1.21
TDP1-211ENST00000555178 GYPEP15421 78 aa7.51□□□□□ -1.21
TDP1-211ENST00000555178 PMCHP20382 165 aa7.51□□□□□ -1.21
TDP1-211ENST00000555178 FA2HQ7L5A8 372 aa7.51□□□□□ -1.21
TDP1-211ENST00000555178 Q8N8P6 123 aa7.51□□□□□ -1.21
TDP1-211ENST00000555178 TRBV7-3A0A075B6L6 115 aa7.5□□□□□ -1.21
TDP1-211ENST00000555178 DEFB131BA0A096LNP1 70 aa7.5□□□□□ -1.21
TDP1-211ENST00000555178 PRSS47A8MTI9 375 aa7.5□□□□□ -1.21
TDP1-211ENST00000555178 PAX4O43316 350 aa7.5□□□□□ -1.21
TDP1-211ENST00000555178 HIST3H2BBQ8N257 126 aa7.5□□□□□ -1.21
TDP1-211ENST00000555178 AP5S1Q9NUS5 200 aa7.5□□□□□ -1.21
TDP1-211ENST00000555178 A0A096LNJ9 63 aa7.5□□□□□ -1.21
TDP1-211ENST00000555178 IGHV1-24A0A0C4DH33 117 aa7.5□□□□□ -1.21
TDP1-211ENST00000555178 TRBV10-1A0A0K0K1A3 114 aa7.5□□□□□ -1.21
TDP1-211ENST00000555178 TRBV27A0A0K0K1C4 114 aa7.5□□□□□ -1.21
TDP1-211ENST00000555178 CIDEAO60543 219 aa7.5□□□□□ -1.21
TDP1-211ENST00000555178 PPP1R17O96001 155 aa7.5□□□□□ -1.21
TDP1-211ENST00000555178 TSHBP01222 138 aa7.5□□□□□ -1.21
TDP1-211ENST00000555178 UBE2D3P61077 147 aa7.5□□□□□ -1.21
TDP1-211ENST00000555178 UBE2D2P62837 147 aa7.5□□□□□ -1.21
TDP1-211ENST00000555178 LINC00694P0DN24 101 aa7.49□□□□□ -1.21
TDP1-211ENST00000555178 RPL36AP83881 106 aaKnown RBP7.49□□□□□ -1.21
TDP1-211ENST00000555178 RPL36ALQ969Q0 106 aaKnown RBP7.49□□□□□ -1.21
TDP1-211ENST00000555178 PRADC1Q9BSG0 188 aa7.49□□□□□ -1.21
TDP1-211ENST00000555178 NXT2Q9NPJ8 142 aaKnown RBP7.49□□□□□ -1.21
TDP1-211ENST00000555178 HSBP1O75506 76 aa7.48□□□□□ -1.21
TDP1-211ENST00000555178 ZFAND6Q6FIF0 208 aa7.48□□□□□ -1.21
TDP1-211ENST00000555178 I3L3M4 83 aa7.48□□□□□ -1.21
TDP1-211ENST00000555178 VCYO14598 125 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms