RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 MDFICQ9P1T7 246 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 B9A039 149 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 IGHV3-33P01772 117 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 UBE2E1P51965 193 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 PLA2G2CQ5R387 149 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 Q9UF83 564 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 TRAV21A0A0B4J279 112 aa6.67□□□□□ -1.34
SYNE2-217ENST00000555022 CELSR2Q9HCU4 2923 aa6.67□□□□□ -1.34
SYNE2-217ENST00000555022 RNASE3P12724 160 aaKnown RBP6.67□□□□□ -1.34
SYNE2-217ENST00000555022 PSMG3-AS1Q96PY0 264 aa6.67□□□□□ -1.34
SYNE2-217ENST00000555022 FAM208BQ5VWN6 2430 aa6.67□□□□□ -1.34
SYNE2-217ENST00000555022 ITPR1Q14643 2758 aa6.67□□□□□ -1.34
SYNE2-217ENST00000555022 H3BMM0 161 aa6.66□□□□□ -1.34
SYNE2-217ENST00000555022 ATP6V0E2Q8NHE4 81 aa6.66□□□□□ -1.34
SYNE2-217ENST00000555022 UBE2WQ96B02 151 aa6.66□□□□□ -1.34
SYNE2-217ENST00000555022 FN1P02751 2386 aaKnown RBP6.66□□□□□ -1.34
SYNE2-217ENST00000555022 CACNA1AO00555 2505 aa6.66□□□□□ -1.34
SYNE2-217ENST00000555022 ZNF876PQ49A33 203 aa6.66□□□□□ -1.34
SYNE2-217ENST00000555022 C9orf47Q6ZRZ4 202 aa6.66□□□□□ -1.34
SYNE2-217ENST00000555022 GPHB5Q86YW7 130 aa6.66□□□□□ -1.34
SYNE2-217ENST00000555022 NPBQ8NG41 125 aa6.66□□□□□ -1.34
SYNE2-217ENST00000555022 UTP20O75691 2785 aaKnown RBP6.66□□□□□ -1.34
SYNE2-217ENST00000555022 ID1P41134 155 aa6.66□□□□□ -1.34
SYNE2-217ENST00000555022 SPINK13Q1W4C9 94 aa6.66□□□□□ -1.34
SYNE2-217ENST00000555022 SLC25A29Q8N8R3 303 aa6.66□□□□□ -1.34
SYNE2-217ENST00000555022 ODF3Q96PU9 254 aa6.66□□□□□ -1.34
SYNE2-217ENST00000555022 ADAMTSL4-AS1Q5T5F5 129 aa6.65□□□□□ -1.34
SYNE2-217ENST00000555022 VCX2Q9H322 139 aa6.65□□□□□ -1.34
SYNE2-217ENST00000555022 IGHV3-16A0A0C4DH30 117 aa6.65□□□□□ -1.35
SYNE2-217ENST00000555022 LINC01546A6NGU7 62 aa6.65□□□□□ -1.35
SYNE2-217ENST00000555022 RHODO00212 210 aa6.65□□□□□ -1.35
SYNE2-217ENST00000555022 PPDPFQ9H3Y8 114 aa6.65□□□□□ -1.35
SYNE2-217ENST00000555022 CENPVL3A0A0U1RRI6 287 aa6.65□□□□□ -1.35
SYNE2-217ENST00000555022 CD28P10747 220 aa6.65□□□□□ -1.35
SYNE2-217ENST00000555022 SYNJ2BPP57105 145 aa6.65□□□□□ -1.35
SYNE2-217ENST00000555022 FAM236AA0A1B0GUQ0 79 aa6.64□□□□□ -1.35
SYNE2-217ENST00000555022 FAM236BA0A1B0GV22 79 aa6.64□□□□□ -1.35
SYNE2-217ENST00000555022 HOXD3P31249 432 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-217ENST00000555022 PSMG4Q5JS54 123 aa6.64□□□□□ -1.35
SYNE2-217ENST00000555022 TMEM263Q8WUH6 116 aaKnown RBP6.64□□□□□ -1.35
SYNE2-217ENST00000555022 CCDC168Q8NDH2 2452 aa6.64□□□□□ -1.35
SYNE2-217ENST00000555022 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-217ENST00000555022 LOC107984640A0A0U1RRK4 108 aa6.64□□□□□ -1.35
SYNE2-217ENST00000555022 IGKV2-29A2NJV5 120 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-217ENST00000555022 ATXN8Q156A1 80 aa6.64□□□□□ -1.35
SYNE2-217ENST00000555022 TRAV41A0A0B4J266 112 aa6.63□□□□□ -1.35
SYNE2-217ENST00000555022 IGIPA6NJ69 53 aa6.63□□□□□ -1.35
SYNE2-217ENST00000555022 RPL13AP40429 203 aaKnown RBP6.63□□□□□ -1.35
SYNE2-217ENST00000555022 Q8NA96 180 aa6.63□□□□□ -1.35
SYNE2-217ENST00000555022 FAM110DQ8TAY7 271 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-217ENST00000555022 RHPN1-AS1Q9BWJ2 59 aa6.63□□□□□ -1.35
SYNE2-217ENST00000555022 EPG5Q9HCE0 2579 aa6.63□□□□□ -1.35
SYNE2-217ENST00000555022 C10orf99Q6UWK7 81 aa6.63□□□□□ -1.35
SYNE2-217ENST00000555022 COX8CQ7Z4L0 72 aa6.63□□□□□ -1.35
SYNE2-217ENST00000555022 RNF5Q99942 180 aa6.63□□□□□ -1.35
SYNE2-217ENST00000555022 NAV2Q8IVL1 2488 aa6.63□□□□□ -1.35
SYNE2-217ENST00000555022 IGKV3OR2-268A0A0C4DH90 116 aa6.63□□□□□ -1.35
SYNE2-217ENST00000555022 A0A0J9YXY3 114 aa6.62□□□□□ -1.35
SYNE2-217ENST00000555022 VCYO14598 125 aa6.62□□□□□ -1.35
SYNE2-217ENST00000555022 BRI3O95415 125 aa6.62□□□□□ -1.35
SYNE2-217ENST00000555022 AMELXQ99217 191 aa6.62□□□□□ -1.35
SYNE2-217ENST00000555022 OOSP1A8MZH6 123 aa6.62□□□□□ -1.35
SYNE2-217ENST00000555022 BLCAPP62952 87 aa6.62□□□□□ -1.35
SYNE2-217ENST00000555022 TIMM21Q9BVV7 248 aa6.62□□□□□ -1.35
SYNE2-217ENST00000555022 H7C423 109 aa6.61□□□□□ -1.35
SYNE2-217ENST00000555022 M0R2P5 195 aa6.61□□□□□ -1.35
SYNE2-217ENST00000555022 IGHV3-30-3P0DP02 117 aa6.61□□□□□ -1.35
SYNE2-217ENST00000555022 ICOSQ9Y6W8 199 aa6.61□□□□□ -1.35
SYNE2-217ENST00000555022 ACACBO00763 2458 aa6.61□□□□□ -1.35
SYNE2-217ENST00000555022 NIPBLQ6KC79 2804 aaeCLIP6.61□□□□□ -1.35
SYNE2-217ENST00000555022 TRGV11A0A075B6L2 103 aa6.61□□□□□ -1.35
SYNE2-217ENST00000555022 ODF3BA8MYP8 253 aa6.61□□□□□ -1.35
SYNE2-217ENST00000555022 NDUFA12Q9UI09 145 aa6.61□□□□□ -1.35
SYNE2-217ENST00000555022 ATP5J2P56134 94 aa6.61□□□□□ -1.35
SYNE2-217ENST00000555022 C9orf139Q6ZV77 190 aa6.61□□□□□ -1.35
SYNE2-217ENST00000555022 IGHV3OR16-12A0A075B7B8 117 aa6.6□□□□□ -1.35
SYNE2-217ENST00000555022 NXPH4O95158 308 aa6.6□□□□□ -1.35
SYNE2-217ENST00000555022 KLRB1Q12918 225 aa6.6□□□□□ -1.35
SYNE2-217ENST00000555022 BPESC1Q9GZL8 116 aa6.6□□□□□ -1.35
SYNE2-217ENST00000555022 ABCA12Q86UK0 2595 aa6.6□□□□□ -1.35
SYNE2-217ENST00000555022 MYO18BQ8IUG5 2567 aa6.6□□□□□ -1.35
SYNE2-217ENST00000555022 NDUFA7O95182 113 aa6.6□□□□□ -1.35
SYNE2-217ENST00000555022 LINC00315P59091 139 aa6.6□□□□□ -1.35
SYNE2-217ENST00000555022 ZFYVE26Q68DK2 2539 aa6.6□□□□□ -1.35
SYNE2-217ENST00000555022 FBN2P35556 2912 aa6.6□□□□□ -1.35
SYNE2-217ENST00000555022 A0A1W2PPR1 153 aa6.6□□□□□ -1.35
SYNE2-217ENST00000555022 NSUN5P1Q3KNT7 163 aa6.6□□□□□ -1.35
SYNE2-217ENST00000555022 LY6G5BQ8NDX9 201 aa6.6□□□□□ -1.35
SYNE2-217ENST00000555022 Q9HAA7 133 aa6.6□□□□□ -1.35
SYNE2-217ENST00000555022 PIEZO1Q92508 2521 aa6.59□□□□□ -1.35
SYNE2-217ENST00000555022 TMEM223A0PJW6 202 aa6.59□□□□□ -1.35
SYNE2-217ENST00000555022 I3L3M4 83 aa6.59□□□□□ -1.35
SYNE2-217ENST00000555022 SRSF2Q01130 221 aaKnown RBP6.59□□□□□ -1.35
SYNE2-217ENST00000555022 POLR2KP53803 58 aaKnown RBP6.59□□□□□ -1.35
SYNE2-217ENST00000555022 Q8N6K4 173 aa6.59□□□□□ -1.35
SYNE2-217ENST00000555022 TRBV10-2A0A0K0K1G8 114 aa6.58□□□□□ -1.36
SYNE2-217ENST00000555022 M0QXV9 152 aa6.58□□□□□ -1.36
SYNE2-217ENST00000555022 M0R1W7 72 aa6.58□□□□□ -1.36
SYNE2-217ENST00000555022 LGALS9O00182 355 aa6.58□□□□□ -1.36
SYNE2-217ENST00000555022 LEPROTO15243 131 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms