RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 K7EMT4 169 aa8.3□□□□□ -1.08
SRP54-205ENST00000554803 PF4V1P10720 104 aa8.3□□□□□ -1.08
SRP54-205ENST00000554803 S100A4P26447 101 aaKnown RBP8.3□□□□□ -1.08
SRP54-205ENST00000554803 ID1P41134 155 aa8.3□□□□□ -1.08
SRP54-205ENST00000554803 HERVK_113P61574 105 aa8.3□□□□□ -1.08
SRP54-205ENST00000554803 FOXE3Q13461 319 aa8.3□□□□□ -1.08
SRP54-205ENST00000554803 RNF182Q8N6D2 247 aa8.3□□□□□ -1.08
SRP54-205ENST00000554803 PHLDA1Q8WV24 401 aaPredicted RBP8.3□□□□□ -1.08
SRP54-205ENST00000554803 TMEM141Q96I45 108 aa8.3□□□□□ -1.08
SRP54-205ENST00000554803 SCGB3A1Q96QR1 104 aa8.3□□□□□ -1.08
SRP54-205ENST00000554803 C11orf21Q9P2W6 132 aa8.3□□□□□ -1.08
SRP54-205ENST00000554803 CHTOPQ9Y3Y2 248 aaKnown RBP8.3□□□□□ -1.08
SRP54-205ENST00000554803 PHLDA3Q9Y5J5 127 aa8.3□□□□□ -1.08
SRP54-205ENST00000554803 HECTD4Q9Y4D8 3996 aa8.29□□□□□ -1.08
SRP54-205ENST00000554803 MYMXA0A1B0GTQ4 84 aa8.29□□□□□ -1.08
SRP54-205ENST00000554803 SOCS3O14543 225 aa8.29□□□□□ -1.08
SRP54-205ENST00000554803 PF4P02776 101 aa8.29□□□□□ -1.08
SRP54-205ENST00000554803 TRGV3P03979 118 aa8.29□□□□□ -1.08
SRP54-205ENST00000554803 FOXI2Q6ZQN5 318 aa8.29□□□□□ -1.08
SRP54-205ENST00000554803 ZFAND2AQ8N6M9 145 aa8.29□□□□□ -1.08
SRP54-205ENST00000554803 NEXN-AS1Q8NBZ9 246 aa8.29□□□□□ -1.08
SRP54-205ENST00000554803 VCX2Q9H322 139 aa8.29□□□□□ -1.08
SRP54-205ENST00000554803 ALMS1Q8TCU4 4167 aa8.29□□□□□ -1.08
SRP54-205ENST00000554803 IGKV2D-26A0A0A0MRZ7 120 aa8.28□□□□□ -1.08
SRP54-205ENST00000554803 A0A1W2PRX2 142 aa8.28□□□□□ -1.08
SRP54-205ENST00000554803 H3BVH4 76 aa8.28□□□□□ -1.08
SRP54-205ENST00000554803 FXYD2P54710 66 aa8.28□□□□□ -1.08
SRP54-205ENST00000554803 IGFL4Q6B9Z1 124 aa8.28□□□□□ -1.08
SRP54-205ENST00000554803 C10orf99Q6UWK7 81 aa8.28□□□□□ -1.08
SRP54-205ENST00000554803 GTSCR1Q86UQ5 136 aa8.28□□□□□ -1.08
SRP54-205ENST00000554803 HIST1H4GQ99525 98 aa8.28□□□□□ -1.08
SRP54-205ENST00000554803 CYSLTR1Q9Y271 337 aa8.28□□□□□ -1.08
SRP54-205ENST00000554803 TRBV7-3A0A075B6L6 115 aa8.27□□□□□ -1.09
SRP54-205ENST00000554803 TRBV6-5A0A0K0K1A5 114 aa8.27□□□□□ -1.09
SRP54-205ENST00000554803 IGLL5B9A064 214 aa8.27□□□□□ -1.09
SRP54-205ENST00000554803 ATP6V0E2Q8NHE4 81 aa8.27□□□□□ -1.09
SRP54-205ENST00000554803 ZNF479Q96JC4 524 aa8.27□□□□□ -1.09
SRP54-205ENST00000554803 TIMM17AQ99595 171 aa8.27□□□□□ -1.09
SRP54-205ENST00000554803 SORL1Q92673 2214 aa8.26□□□□□ -1.09
SRP54-205ENST00000554803 VCYO14598 125 aa8.26□□□□□ -1.09
SRP54-205ENST00000554803 PPIFP30405 207 aaKnown RBP8.26□□□□□ -1.09
SRP54-205ENST00000554803 FXYD7P58549 80 aa8.26□□□□□ -1.09
SRP54-205ENST00000554803 CFHR3Q02985 330 aa8.26□□□□□ -1.09
SRP54-205ENST00000554803 RRN3P1Q2M238 152 aa8.26□□□□□ -1.09
SRP54-205ENST00000554803 C12orf74Q32Q52 190 aa8.26□□□□□ -1.09
SRP54-205ENST00000554803 LCNL1Q6ZST4 164 aa8.26□□□□□ -1.09
SRP54-205ENST00000554803 RASL10AQ92737 203 aa8.26□□□□□ -1.09
SRP54-205ENST00000554803 RAB37Q96AX2 223 aa8.26□□□□□ -1.09
SRP54-205ENST00000554803 KIR2DL4Q99706 377 aa8.26□□□□□ -1.09
SRP54-205ENST00000554803 DAZ1Q9NQZ3 744 aaKnown RBP8.26□□□□□ -1.09
SRP54-205ENST00000554803 NHP2Q9NX24 153 aaKnown RBP8.26□□□□□ -1.09
SRP54-205ENST00000554803 TSSC4Q9Y5U2 329 aaPredicted RBP8.26□□□□□ -1.09
SRP54-205ENST00000554803 KLLNB2CW77 178 aa8.25□□□□□ -1.09
SRP54-205ENST00000554803 GATA1P15976 413 aaPredicted RBP8.25□□□□□ -1.09
SRP54-205ENST00000554803 RHOHQ15669 191 aa8.25□□□□□ -1.09
SRP54-205ENST00000554803 C21orf62-AS1Q17RA5 79 aa8.25□□□□□ -1.09
SRP54-205ENST00000554803 C2orf66Q6UXQ4 117 aa8.25□□□□□ -1.09
SRP54-205ENST00000554803 LINC00482Q8N8I6 264 aa8.25□□□□□ -1.09
SRP54-205ENST00000554803 SYT8Q8NBV8 401 aa8.25□□□□□ -1.09
SRP54-205ENST00000554803 SPANXB1Q9NS25 103 aaPredicted RBP8.25□□□□□ -1.09
SRP54-205ENST00000554803 IGHV3-35A0A0C4DH35 117 aa8.24□□□□□ -1.09
SRP54-205ENST00000554803 RBMY1BA6NDE4 496 aaKnown RBP8.24□□□□□ -1.09
SRP54-205ENST00000554803 RBMY1EA6NEQ0 496 aaKnown RBP8.24□□□□□ -1.09
SRP54-205ENST00000554803 GAS8-AS1O95177 125 aa8.24□□□□□ -1.09
SRP54-205ENST00000554803 IGLV1-40P01703 118 aa8.24□□□□□ -1.09
SRP54-205ENST00000554803 RBMY1DP0C7P1 496 aaKnown RBP8.24□□□□□ -1.09
SRP54-205ENST00000554803 TCTEX1D4Q5JR98 221 aa8.24□□□□□ -1.09
SRP54-205ENST00000554803 WFDC3Q8IUB2 231 aa8.24□□□□□ -1.09
SRP54-205ENST00000554803 RNF152Q8N8N0 203 aa8.24□□□□□ -1.09
SRP54-205ENST00000554803 BAALCQ8WXS3 180 aa8.24□□□□□ -1.09
SRP54-205ENST00000554803 KLK15Q9H2R5 256 aa8.24□□□□□ -1.09
SRP54-205ENST00000554803 TRBV20-1A0A075B6N2 111 aa8.23□□□□□ -1.09
SRP54-205ENST00000554803 CRYBA4P53673 196 aa8.23□□□□□ -1.09
SRP54-205ENST00000554803 PMVKQ15126 192 aa8.23□□□□□ -1.09
SRP54-205ENST00000554803 ANXA2RQ3ZCQ2 193 aa8.23□□□□□ -1.09
SRP54-205ENST00000554803 ZFAND6Q6FIF0 208 aa8.23□□□□□ -1.09
SRP54-205ENST00000554803 FAM159AQ6UWV7 190 aa8.23□□□□□ -1.09
SRP54-205ENST00000554803 GPHB5Q86YW7 130 aa8.23□□□□□ -1.09
SRP54-205ENST00000554803 IGHV3OR16-8A0A075B7F1 116 aa8.22□□□□□ -1.09
SRP54-205ENST00000554803 IGHV3-66A0A0C4DH42 116 aa8.22□□□□□ -1.09
SRP54-205ENST00000554803 C11orf86A6NJI1 115 aa8.22□□□□□ -1.09
SRP54-205ENST00000554803 LGALS9O00182 355 aa8.22□□□□□ -1.09
SRP54-205ENST00000554803 POLR2KP53803 58 aaKnown RBP8.22□□□□□ -1.09
SRP54-205ENST00000554803 CD300EQ496F6 205 aaPredicted RBP8.22□□□□□ -1.09
SRP54-205ENST00000554803 GAGE13Q4V321 117 aa8.22□□□□□ -1.09
SRP54-205ENST00000554803 TM4SF20Q53R12 229 aa8.22□□□□□ -1.09
SRP54-205ENST00000554803 PRR9Q5T870 116 aa8.22□□□□□ -1.09
SRP54-205ENST00000554803 C20orf173Q96LM9 149 aa8.22□□□□□ -1.09
SRP54-205ENST00000554803 EDA2RQ9HAV5 297 aa8.22□□□□□ -1.09
SRP54-205ENST00000554803 KIF25-AS1Q9Y6Z4 181 aa8.22□□□□□ -1.09
SRP54-205ENST00000554803 TRAV26-2A0A0B4J265 109 aa8.21□□□□□ -1.1
SRP54-205ENST00000554803 TRBV27A0A0K0K1C4 114 aa8.21□□□□□ -1.1
SRP54-205ENST00000554803 PRSS29PA6NIE9 313 aa8.21□□□□□ -1.1
SRP54-205ENST00000554803 M0QXV9 152 aa8.21□□□□□ -1.1
SRP54-205ENST00000554803 SAP30O75446 220 aa8.21□□□□□ -1.1
SRP54-205ENST00000554803 DUSP14O95147 198 aaKnown RBP8.21□□□□□ -1.1
SRP54-205ENST00000554803 LGALS1P09382 135 aaKnown RBP8.21□□□□□ -1.1
SRP54-205ENST00000554803 RNASE3P12724 160 aaKnown RBP8.21□□□□□ -1.1
SRP54-205ENST00000554803 PSMB8P28062 276 aa8.21□□□□□ -1.1
SRP54-205ENST00000554803 UBE2D1P51668 147 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms