RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 H3BNG1 76 aa6.83□□□□□ -1.32
TMEM260-204ENST00000553335 SCO1O75880 301 aa6.83□□□□□ -1.32
TMEM260-204ENST00000553335 HLA-DQA1P01909 254 aa6.83□□□□□ -1.32
TMEM260-204ENST00000553335 GYPEP15421 78 aa6.83□□□□□ -1.32
TMEM260-204ENST00000553335 MALP21145 153 aa6.83□□□□□ -1.32
TMEM260-204ENST00000553335 SUMO4Q6EEV6 95 aa6.83□□□□□ -1.32
TMEM260-204ENST00000553335 CEMP1Q6PRD7 247 aaPredicted RBP6.83□□□□□ -1.32
TMEM260-204ENST00000553335 MUC7Q8TAX7 377 aa6.83□□□□□ -1.32
TMEM260-204ENST00000553335 MRAP2Q96G30 205 aa6.83□□□□□ -1.32
TMEM260-204ENST00000553335 TRBV10-1A0A0K0K1A3 114 aa6.82□□□□□ -1.32
TMEM260-204ENST00000553335 C9orf118A6NHY6 69 aa6.82□□□□□ -1.32
TMEM260-204ENST00000553335 IGLL5B9A064 214 aa6.82□□□□□ -1.32
TMEM260-204ENST00000553335 CKS2P33552 79 aa6.82□□□□□ -1.32
TMEM260-204ENST00000553335 MRPL51Q4U2R6 128 aaKnown RBP6.82□□□□□ -1.32
TMEM260-204ENST00000553335 GAGE13Q4V321 117 aa6.82□□□□□ -1.32
TMEM260-204ENST00000553335 TMEM136Q6ZRR5 245 aa6.82□□□□□ -1.32
TMEM260-204ENST00000553335 Q6ZSN1 163 aa6.82□□□□□ -1.32
TMEM260-204ENST00000553335 C15orf53Q8NAA6 179 aa6.82□□□□□ -1.32
TMEM260-204ENST00000553335 RNF185Q96GF1 192 aa6.82□□□□□ -1.32
TMEM260-204ENST00000553335 DNAJC30Q96LL9 226 aa6.82□□□□□ -1.32
TMEM260-204ENST00000553335 YPEL4Q96NS1 127 aa6.82□□□□□ -1.32
TMEM260-204ENST00000553335 DNAH7Q8WXX0 4024 aa6.81□□□□□ -1.32
TMEM260-204ENST00000553335 M0QY20 66 aa6.81□□□□□ -1.32
TMEM260-204ENST00000553335 PPP1R17O96001 155 aa6.81□□□□□ -1.32
TMEM260-204ENST00000553335 APCSP02743 223 aa6.81□□□□□ -1.32
TMEM260-204ENST00000553335 PPBPP02775 128 aa6.81□□□□□ -1.32
TMEM260-204ENST00000553335 TCTAP57738 103 aa6.81□□□□□ -1.32
TMEM260-204ENST00000553335 RPL36AP83881 106 aaKnown RBP6.81□□□□□ -1.32
TMEM260-204ENST00000553335 MRPL23Q16540 153 aaKnown RBP6.81□□□□□ -1.32
TMEM260-204ENST00000553335 Q8N3U1 123 aa6.81□□□□□ -1.32
TMEM260-204ENST00000553335 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.81□□□□□ -1.32
TMEM260-204ENST00000553335 RPL36ALQ969Q0 106 aaKnown RBP6.81□□□□□ -1.32
TMEM260-204ENST00000553335 VSIG2Q96IQ7 327 aa6.81□□□□□ -1.32
TMEM260-204ENST00000553335 NIT2Q9NQR4 276 aa6.81□□□□□ -1.32
TMEM260-204ENST00000553335 TRAPPC1Q9Y5R8 145 aa6.81□□□□□ -1.32
TMEM260-204ENST00000553335 TNFRSF18Q9Y5U5 241 aa6.81□□□□□ -1.32
TMEM260-204ENST00000553335 ICOSQ9Y6W8 199 aa6.81□□□□□ -1.32
TMEM260-204ENST00000553335 TRAV26-2A0A0B4J265 109 aa6.8□□□□□ -1.32
TMEM260-204ENST00000553335 GAGE12JA6NER3 117 aa6.8□□□□□ -1.32
TMEM260-204ENST00000553335 C3orf84H3BNL1 204 aa6.8□□□□□ -1.32
TMEM260-204ENST00000553335 NUDT3O95989 172 aa6.8□□□□□ -1.32
TMEM260-204ENST00000553335 SRIP30626 198 aa6.8□□□□□ -1.32
TMEM260-204ENST00000553335 FABP9Q0Z7S8 132 aa6.8□□□□□ -1.32
TMEM260-204ENST00000553335 GAGE1Q13065 139 aa6.8□□□□□ -1.32
TMEM260-204ENST00000553335 GAGE4Q13068 117 aa6.8□□□□□ -1.32
TMEM260-204ENST00000553335 GAGE5Q13069 117 aa6.8□□□□□ -1.32
TMEM260-204ENST00000553335 OR10J3Q5JRS4 329 aa6.8□□□□□ -1.32
TMEM260-204ENST00000553335 ZFAND6Q6FIF0 208 aa6.8□□□□□ -1.32
TMEM260-204ENST00000553335 SH2D6Q7Z4S9 175 aa6.8□□□□□ -1.32
TMEM260-204ENST00000553335 ORMDL3Q8N138 153 aa6.8□□□□□ -1.32
TMEM260-204ENST00000553335 NEXN-AS1Q8NBZ9 246 aa6.8□□□□□ -1.32
TMEM260-204ENST00000553335 ZNRF2Q8NHG8 242 aa6.8□□□□□ -1.32
TMEM260-204ENST00000553335 TRBV7-3A0A075B6L6 115 aa6.79□□□□□ -1.32
TMEM260-204ENST00000553335 LOC100131303A0A0U1RQF7 123 aa6.79□□□□□ -1.32
TMEM260-204ENST00000553335 COLCA2A8K830 154 aa6.79□□□□□ -1.32
TMEM260-204ENST00000553335 D6R8Y8 96 aa6.79□□□□□ -1.32
TMEM260-204ENST00000553335 SMKR1H3BMG3 65 aa6.79□□□□□ -1.32
TMEM260-204ENST00000553335 P0DMU3 169 aa6.79□□□□□ -1.32
TMEM260-204ENST00000553335 FAM231AP0DMU4 169 aa6.79□□□□□ -1.32
TMEM260-204ENST00000553335 FAM231CP0DMU5 169 aa6.79□□□□□ -1.32
TMEM260-204ENST00000553335 RPS10P46783 165 aaKnown RBP6.79□□□□□ -1.32
TMEM260-204ENST00000553335 DYNC2H1Q8NCM8 4307 aaKnown RBP6.78□□□□□ -1.32
TMEM260-204ENST00000553335 A0A096LPF7 62 aa6.78□□□□□ -1.32
TMEM260-204ENST00000553335 TRBV6-5A0A0K0K1A5 114 aa6.78□□□□□ -1.32
TMEM260-204ENST00000553335 PHOX2AO14813 284 aa6.78□□□□□ -1.32
TMEM260-204ENST00000553335 NCR2O95944 276 aa6.78□□□□□ -1.32
TMEM260-204ENST00000553335 NEGR1Q7Z3B1 354 aa6.78□□□□□ -1.32
TMEM260-204ENST00000553335 RPL39LQ96EH5 51 aaKnown RBP6.78□□□□□ -1.32
TMEM260-204ENST00000553335 PRELID3AQ96N28 172 aa6.78□□□□□ -1.32
TMEM260-204ENST00000553335 ST20Q9HBF5 79 aa6.78□□□□□ -1.32
TMEM260-204ENST00000553335 LAMTOR2Q9Y2Q5 125 aa6.78□□□□□ -1.32
TMEM260-204ENST00000553335 TNFRSF6BO95407 300 aa6.77□□□□□ -1.33
TMEM260-204ENST00000553335 RAB5AP20339 215 aa6.77□□□□□ -1.33
TMEM260-204ENST00000553335 UBE2D3P61077 147 aa6.77□□□□□ -1.33
TMEM260-204ENST00000553335 UBE2D2P62837 147 aa6.77□□□□□ -1.33
TMEM260-204ENST00000553335 KIAA1644Q3SXP7 199 aa6.77□□□□□ -1.33
TMEM260-204ENST00000553335 DAZ4Q86SG3 579 aaKnown RBP6.77□□□□□ -1.33
TMEM260-204ENST00000553335 ATP6V0E2Q8NHE4 81 aa6.77□□□□□ -1.33
TMEM260-204ENST00000553335 DAZ3Q9NR90 486 aaKnown RBP6.77□□□□□ -1.33
TMEM260-204ENST00000553335 APLNQ9ULZ1 77 aa6.77□□□□□ -1.33
TMEM260-204ENST00000553335 SDHAF1A6NFY7 115 aa6.76□□□□□ -1.33
TMEM260-204ENST00000553335 GAS8-AS1O95177 125 aa6.76□□□□□ -1.33
TMEM260-204ENST00000553335 LINC00694P0DN24 101 aa6.76□□□□□ -1.33
TMEM260-204ENST00000553335 SUMO2P61956 95 aaKnown RBP6.76□□□□□ -1.33
TMEM260-204ENST00000553335 TMEM97Q5BJF2 176 aa6.76□□□□□ -1.33
TMEM260-204ENST00000553335 CASC10Q5T4H9 136 aa6.76□□□□□ -1.33
TMEM260-204ENST00000553335 NRACQ8N912 160 aa6.76□□□□□ -1.33
TMEM260-204ENST00000553335 C20orf78Q9BR46 151 aa6.76□□□□□ -1.33
TMEM260-204ENST00000553335 MAP1LC3AQ9H492 121 aa6.76□□□□□ -1.33
TMEM260-204ENST00000553335 Q9UF83 564 aa6.76□□□□□ -1.33
TMEM260-204ENST00000553335 STAB2Q8WWQ8 2551 aa6.75□□□□□ -1.33
TMEM260-204ENST00000553335 I3L3M4 83 aa6.75□□□□□ -1.33
TMEM260-204ENST00000553335 VCYO14598 125 aa6.75□□□□□ -1.33
TMEM260-204ENST00000553335 NPYP01303 97 aa6.75□□□□□ -1.33
TMEM260-204ENST00000553335 PMCHP20382 165 aa6.75□□□□□ -1.33
TMEM260-204ENST00000553335 RNF151Q2KHN1 245 aa6.75□□□□□ -1.33
TMEM260-204ENST00000553335 ALKBH7Q9BT30 221 aaPredicted RBP6.75□□□□□ -1.33
TMEM260-204ENST00000553335 GTSF1LQ9H1H1 148 aa6.75□□□□□ -1.33
TMEM260-204ENST00000553335 CSMD3Q7Z407 3707 aa6.74□□□□□ -1.33
TMEM260-204ENST00000553335 PLECQ15149 4684 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms